Struthio camelus australis (South African ostrich): 104144634
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Entry
104144634 CDS
T08512
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04382
Cornified envelope formation
scam04510
Focal adhesion
scam04512
ECM-receptor interaction
scam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104144634 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104144634 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104144634 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104144634 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scam04147
]
104144634 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
scam00536
]
104144634 (COL4A4)
Exosome [BR:
scam04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104144634 (COL4A4)
Glycosaminoglycan binding proteins [BR:
scam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104144634 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104144634
NCBI-ProteinID:
XP_009674046
Ensembl:
ENSSCUG00000009953
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MALTKDSSEWIKRIITAAWWLLIVFSAQEIDGGEYAYIDPCGGQDCSVCRCFPEKGSRGQ
PGELGAQGPIGSLGSTGPAGLPGEKGQRGDNGQPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGSEGPMGKRGLDGCNGSRGDPGFPGENGYIGPRGPYGYPGQKGEKGNSVYVSHFGRGPP
GDRGDPGPPGMPGPRGPRGTTGPSGYPGQPGLPGIPGFPGLPGEQGNPGIGVDGQKGEPG
DVGLPGPPGSPLLIGPPGAQLFKGEKGQKGLPGMTGDRGPRGPKGVSGRGEKGEKGIPGF
PGVRGSPGSYGPAGFPGIKGEPGVAGFPGQAGYPGIKGDPGEKGPPGPPGTVGTPLFPVK
GLQGDPGFPGPIGDMGSIGPPGLAGPLGRPGDDGTSLPGLPGTSGTPGPQGFQGDPGFPG
TGESVPGRPGFPGPPGLPGQPGRPGLPGLPSVICTDRGIPGEPGAKGQTGLPGRKGEKGE
KGNQGLCSCSPGPPGPRGIQGPPGTQGKKGQMGYPGRHGEKGNPGLSGAMGSPGLPGTPG
SAGRDGEKGEKGDPGRIRIKGIKGERGPTGVPGFPGQRGNDGREGELGLPGEKGAKGDSG
VPLLGDKGFPGVPGSPGVKGRMGLPGLGFPGPPGVRGIPGDFGDTGSIGPHGPKGQKGET
VCITPPYPGNPGPPGFKGVQGPKGLKGLPGRPGPNGFDGQKGQSGRPGAGIPGPEGFRGK
TGDPGDEGERGSTVDGKNGPPGPPGIDGQKGVPGDTTYGPPGIPGYRGLPGPPGAQGTRG
DPGIPGLQGQPGTPGFPGVKGFRGPEGGRGAPGCPGFPGLPCDMGLPGPPGLRGIMGLPG
PQGLPGFKGQRGDRGLAGPPGVKGLKGSPGLPGPPGPPGSRGVPGLHGDRGAPGFPGQTG
SKGIRGPQGFPGLPGAQGPMGISGLKGEEGEIGLPGPGGECGDLGIKGERGPPGDSGYVT
IRLEKGRKGEPGFPGENGFRGERGEKGHAGSRGIPGFPGKNGLPGLPGDHGDPGVLGFPG
LQGFPGPKGFKGITGFQGPPGDQGDVGLPGIPGNPGLTGPKGAKGEKGDPTVLLGTRGPK
GPPGDPGLPGLCGFPGEKGSSGIQGQPGRPGSKGQPGYPGIPGFPGAMGPQGLPGEPGEK
GNHGFLGPPGLQGLAGPQGRKGLPGLPGLDGLNGLKGQKGSPGAPGQSETGPPGYSGELG
PKGDRGEPGWPGISIPGPPGERGFPGFPGRRGAVGPAGPMGRSPDSAPPGVPGDQGPPGL
DGIRGQPGNPGPPGETVFVRGDPGDVGIQGAPGIPGPRGKQGAKGLPGNQGRTGPKGPMG
IPGPHGPPGATGQPGDQGFQGEPGPKGPSGFIGDPGEPGKIDDSCPAIPGPPGERGQRGD
DGSIGLPGPIGHPGPQGRKGEEGSRGLPGQDGLPGPPGPPGDQGNIGEQGYTGPQGPPGQ
TGIPGPPGPQVRSASGFLLVLHSQSDREPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGL
AGSCLPIFNTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPMMPLAEEEIQPYISRCAVC
EAPAQAVAVHSQDQSIPPCPLNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSA
PFIECQGQRGTCQFFANEYSFWLITVMPELQFASAPLSGTLKEGQEQRKKISRCQVCLKH
G
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacaaaggattcatctgaatggattaaacggattatcacagctgcctggtgg
cttctgattgttttttcagcacaagaaattgatgggggagaatatgcatatattgaccca
tgcgggggacaggattgttcagtttgtcggtgctttccagaaaaaggatcaagaggtcag
ccgggtgagctgggagctcaaggaccaattggatccttgggatctacaggaccagctggt
ctgcccggtgagaaaggtcagagaggtgacaacgggcaacctggaccagctggagaaaaa
ggtgataagggcccaacaggagtcccgggatttcctggtttagacggtgttcctggatta
ccaggaagtgaaggacccatgggcaagcgtggtttggatggctgcaatggctcaagagga
gatccaggattcccaggcgaaaatggatacattggaccaagaggtccttatgggtatcca
gggcaaaaaggagaaaaaggaaattcagtatatgtttcccattttggaagaggacctcca
ggagatagaggtgatcctggacctcctggcatgcctggacctagagggccaagaggtaca
acgggcccatctggatacccaggccaaccaggcttgcctggtattccaggtttcccaggt
ttgccaggtgaacagggaaatccaggcattggagtggatggacaaaaaggggagccgggt
gatgttggacttcctgggccaccagggtcaccactgttaattggacctcctggagctcaa
ctgttcaaaggagaaaagggccaaaaaggacttcctgggatgacaggagacagaggacca
cgtggacccaaaggtgtatctgggagaggagaaaagggtgaaaaaggtattcctggattc
cctggagtacggggtagtcctggttcttatggacctgcaggttttcctggaataaaggga
gaaccaggagttgctggttttcctggacaagctggctatccgggcataaagggggatcct
ggagaaaaagggcccccaggtcctcctggaactgttggaactccactgtttcctgtaaaa
ggtctgcaaggagatcctggatttccgggtcccattggtgatatggggtcaattggacca
cctggccttgcaggcccactaggaagaccaggagatgatggaacaagtctgcctggcctg
ccaggaacaagtgggacaccaggtccgcaaggttttcaaggtgaccctggtttccctgga
acaggtgaatcagtcccaggaagacctggatttcctggaccaccaggattaccaggacag
ccaggaagaccaggcttaccgggactacccagtgtaatttgtactgatagagggatccct
ggagaacctggagcaaaaggtcagacaggccttccaggaagaaaaggtgaaaaaggagaa
aagggaaaccaaggcctctgctcatgtagccctggtcctcctggtccccgtggtatacaa
ggacctccaggtactcaaggaaagaaaggacaaatgggataccctggcagacatggagaa
aagggcaacccaggcttatctggtgcaatgggatcaccagggctccctgggacacctggt
tctgctggacgagatggtgaaaaaggagagaagggtgatccagggagaattagaataaaa
ggaataaaaggtgaaagaggtcctactggggttccaggatttccaggccaaagaggtaat
gatggcagagaaggggaactaggactgcctggggaaaaaggagccaagggcgattctgga
gtaccactgctgggcgataaagggttccctggggtcccaggaagtcctggggtgaaagga
cggatgggattgcctggtttggggtttcctggcccaccaggagtcagaggaatccctgga
gactttggtgatactggtagcattgggccacatggtccaaagggtcagaaaggtgagaca
gtctgtattactccaccataccctggaaatccaggccccccaggttttaaaggtgttcaa
ggaccaaagggtttaaaaggactccctggtcgtcctggaccaaatggctttgatgggcag
aaaggccagtcaggcaggccaggagcaggaatccctgggccagaaggctttcgaggcaaa
actggtgatcctggtgatgaaggtgaaagaggatctacggttgatggtaaaaatggccct
ccaggtccacctggcatagatggtcagaaaggtgttccaggtgataccacgtatggccct
ccaggaatcccaggctataggggactgccaggaccacctggtgctcaaggaacaaggggt
gatccaggcattcctgggcttcaaggccagcctggtaccccaggatttccaggtgtcaaa
ggttttagaggcccagaaggtggccgaggagcaccaggctgtccaggcttccctggtcta
ccatgtgacatgggcttaccagggccaccaggactcagaggtatcatgggcttgccaggc
cctcaaggcttaccaggatttaaaggtcagagaggagacagaggcctagcagggccacct
ggtgtgaaaggtctcaaaggctctcctggcttaccaggccctccaggtcctccaggctcc
cgaggagttccaggacttcatggggataggggagctcctggcttcccaggccaaacagga
agcaaagggattcgaggacctcagggattcccaggactcccaggagcacaagggccaatg
ggtatctctggattaaaaggcgaagaaggagaaataggcctacctgggcctggtggagaa
tgtggagatctgggaataaaaggtgaaagagggcctccaggagacagtggctacgttact
attcggcttgagaaaggacgaaagggagaaccagggtttcctggcgagaatggatttaga
ggtgaaagaggtgaaaaaggccatgctggttccagaggcatcccaggatttccagggaaa
aatggtctcccaggactgccaggtgaccatggtgaccctggagtgctggggtttccagga
ttacagggttttccaggaccaaagggctttaaaggaattacgggttttcagggaccacca
ggtgaccagggtgatgttggcttaccaggaatccctggaaatccaggactgactggccca
aaaggagctaaaggtgagaaaggtgacccaaccgttctgcttggtacacgtggtccaaaa
gggcctccaggagatccaggattaccaggactctgtggattcccaggagagaagggttca
tcaggtatccaagggcaacctggaagaccaggatccaaggggcagccaggatacccagga
atacctggttttccaggtgctatgggccctcagggtttgccaggagaacctggagaaaaa
gggaaccatggatttttgggacctccaggattgcaaggattagctggtccccaaggcaga
aaaggtcttcctggactgcctggactagatggcttgaatggactaaaaggtcaaaagggt
tccccaggagctccaggtcaaagtgaaacagggcctccaggatactcaggagaacttgga
ccaaaaggcgacagaggtgaacctggatggcctggtatttctattccaggcccccctgga
gaaaggggattcccaggattcccaggtagaagaggagctgttggacccgctggacctatg
ggaagatctcctgatagtgctcctcctggtgttccaggtgatcaaggaccacctggttta
gatggcatcagaggccagccagggaatcctggccctcctggagagactgtctttgtgcga
ggagatccaggtgatgtcggtattcaaggggcacctggcattcctgggccgcgagggaaa
caaggagccaaaggtcttccagggaatcaaggaagaacaggcccaaaaggtcctatggga
atccctggcccacatggtccacctggtgctacaggacaaccaggggatcaaggttttcaa
ggagaacctggtcctaaaggtccctcaggtttcataggtgaccctggtgaaccaggaaaa
atagatgactcatgccctgcaatcccagggcctcctggagaaagagggcaaagaggagat
gatggctctataggattaccagggccaataggtcacccgggaccccaaggaagaaaaggt
gaagaagggtcacgtggcctgccaggtcaagatggcttacctgggccacctggacctcca
ggtgaccaagggaatataggagaacaaggatacactggcccacaaggtccacctggccaa
actggtatcccaggaccaccaggccctcaagttagatctgcaagtgggttcttgctcgtt
cttcacagtcagtcagacagagaaccactctgtccgcagggaatgccaaaattatggact
ggctatagcctgctgtacctggaaggacaagagaaagctcataatcaagatctcggtctg
gcaggatcttgtcttcctatatttaataccatgccctttgcttactgtaatatcaaccaa
gtttgttactatgccagtcgaaacgataagtcttactggttgtcaagtgctgctccttta
ccaatgatgccactcgctgaagaggaaatacaaccatatataagcagatgtgctgtatgt
gaggccccagcccaagctgtagctgttcatagccaagatcagtcaattcctccctgccca
ctgaactggagaagtctttggataggatattcttttttgatgcacactggatctggtgat
cagggaggcggacagtcccttatgtcgcccggaagttgcctagaagacttcagatctgca
ccattcattgaatgccagggtcagcggggaacatgtcagttttttgctaatgaatacagt
ttctggctaataacagtgatgcccgaattgcagtttgcatcagcccctttgtcaggaact
ctcaaagaaggacaagagcagaggaaaaaaatcagtagatgtcaggtatgcctgaagcat
ggctaa
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integrated database retrieval system
