Struthio camelus australis (South African ostrich): 104144720
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Entry
104144720 CDS
T08512
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104144720 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scam04131
]
104144720 (RABGEF1)
Membrane trafficking [BR:
scam04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
104144720 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
104144720 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
104144720
NCBI-ProteinID:
XP_009674187
Ensembl:
ENSSCUG00000009083
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MLPLAFGAVRLCNGALPPLAFILLLWKSPVIRAGGLCQKDKPAKESLSSNLASSLSLTLF
FSNRKKMNLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQED
WELAERLQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRTGAK
KVAQEKIVKQGQLGRERNADNILRDLKEIFTPSWELASPTEEIQEAKAPSPSIHRQASIE
TDRVSKEFIEFLKTYHKPGQDIYKQCKLFLDTMNHKRDLSIEEQSECAQDFYQNVAEKLQ
TRWKVPSEKVEKAMDQIEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQMLC
VPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASADD
FLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSL
NLSQEDFDRYMSGQTSPKKQESDNWSPDMCLGVKQMYKNLDLLSQLNERQERIVSEAKKL
EKDLIDWTDGITKEVQDIVERYPLEIKPKNQALAAIDSENVENDKLPPPLQPQVYAG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgctgccattggcttttggtgctgtacgattatgtaacggagcccttcctcctctggct
tttattttgttactatggaagtcaccagtaattagagcaggtggcttgtgtcaaaaagac
aagcctgcaaaagaaagtctttctagcaatctagcatcaagtttatctctaactcttttc
ttttcaaacaggaagaaaatgaacctgaagtcggaacgcagaggaattcatgtggatcag
tcggagctgctgtgcaagaagggctgtggttactatggcaatcctgcctggcagggtttt
tgctccaagtgctggagagaggaataccataaggccaggcagaaacagattcaagaggac
tgggagctggcagagcggcttcaacgtgaggaggaagaagcatatgccagcagtcagagt
acccaaggggcgcagtcactgaccttttccaaatttgaagaaaagaaaaccaatgagaaa
acacgaaaggtgactactgtgaagaagttcttcactgcttcttccagaacgggagctaag
aaggtggctcaagagaaaatcgttaagcaaggacagcttgggagggagcgaaatgctgat
aacattctcagggacttgaaggagatttttactccctcctgggaactggcttcccctact
gaagagatccaggaagccaaggctcccagcccttctatacacaggcaggctagcattgag
acagatcgagtatccaaggaattcatagaatttctcaagacatatcataaacctggacaa
gatatctataaacagtgtaaattatttttggacacaatgaatcataagagggatttaagt
attgaggagcaatctgagtgtgcccaagacttctatcaaaatgtagcagagaagttgcag
acacgttggaaagtgccctcggaaaaagttgagaaagcaatggatcagatcgaaaaatac
attatgactcgacagtataaatacgtcttttgtcctgaaacaactgatgatgagaagaag
gatcttgctgtccaaaagagaatcagggctttgcactgggtaactccacaaatgttgtgc
gttcctgttaacgaagaaattccagaagtctctgatatggttgtaaaagcaattacagat
attattgaaatggattcaaaacgtgtccctcgtgacaaattagcatgcatcactaagtgc
agcaagcacatatttaatgctattaaaatcacaaaaaatgaaccagcttctgctgatgat
ttccttccaacacttatatacattgttttgaagggaaacccaccccgcctgcagtccaac
atccaatatataacacgcttctgtaatccaagcaggttaatgacaggagaagatggctac
tattttaccaatctgtgctgcgctgtggccttcattgaaaagctggatgctcagtctcta
aatctgagccaagaggactttgatcgttatatgtctggtcagacgtcgccgaagaagcaa
gaatctgacaactggtcgcctgatatgtgcctgggtgttaagcaaatgtataaaaactta
gatctcctatctcagttgaatgagagacaggaaagaattgtcagtgaagccaagaagctt
gagaaagacctgatagattggacggatggaattactaaggaagtccaagatattgttgag
agatatccgttagaaataaaaccaaaaaatcaagccttagcagctattgactctgaaaat
gtggagaatgacaagctgcccccaccactgcagcctcaagtttatgcaggataa
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