Struthio camelus australis (South African ostrich): 104144750
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Entry
104144750 CDS
T08512
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104144750 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scam04121
]
104144750 (HERC4)
Enzymes [BR:
scam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104144750 (HERC4)
Ubiquitin system [BR:
scam04121
]
Ubiquitin ligases (E3)
HECT type E3
104144750 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
104144750
NCBI-ProteinID:
XP_009674226
Ensembl:
ENSSCUG00000001063
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSGFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG
TEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTS
PHVIKSLLGIPFAQIAAGGAHSLVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR
TQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQIT
CGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSNQCPLTTGSEE
YFCVKRIFSGGDQSFAHYFNPQNMVPPDDFRYPDFLKQIWTVNETFIQRLLTFPSGRLPA
EIANEIDGTFSSAGCLNGSFLALSNDDHYKTSVRFSGVDMNAARLLFHKLIQPDHAHISQ
QVAASLEKNLIPKLTSSLPDVEALRLYLTLPECPLMSDANNFTTLAIPFGTAILNLEKAP
LKVLENWWSVLEPPLFLKVVELYKDVVVHLLKLYKIGLPTSERRVFTSFLHTAFRVLEIL
HKVNERGQVIQYDRFYIHEIQDLIDIRNDYFNWVQQQVFGMDVNHGLTELTDIPVTICTY
PFVFDAQAKTTLLQTDAVIQMQMAVDQAHRQNLSSLFLPVFESVNPCLILMVRRDNIVGD
AVEVLRKTKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRL
IWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLNKKPSLDDLKELMPDV
GRGMQQLLDYPEDDIEEAFCLNFTITVENFGTTEIKELVPNGADIPVVKQNRQDFVDAYV
DYIFNKSVASLFSAFHAGFHKVCGGKVLQLFQPSELQAMVIGNTNYDWKELEKNTEYKGE
YWADHPTIKIFWEVFHELSLEKKKQFLLFLTGSDRIPILGMKCLKLVIQPTGGGEGYLPV
AHTCFNLLDLPKYTDKETLKSKLIQAIDHYEGFSLV
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaatgcatcttttggacagcttggattgggtggaattgatgaagag
attgttttagaaccccgaaaaagtggctttttcttaaataaaagagtccgagatgtggga
tgtggactcagacatactgtttttgtcctggatgatggaactgtttatacatgtggatgc
aatgatctaggacaactagggcacgaaaaagccaggaaaagacccgagcatgttggtgca
ctggatgcccaaaatatagtagctgtatcatgtggagaagctcacacgcttgcgttaaat
gacaagggtcaggtatatgcttggggtctggctactgatggacagcttggcttgcctgga
acagaggagtgcatccgagtgcccagaaatattaaaagcttatcagagatccaaattgtg
caagttgcttgtggttattatcactcacttgcgctctccaaaggaagtgaagtgttttcc
tggggacaaaataaatatggccaactgggtttaggttatgaatataaaaaacaaacatcg
ccgcatgtaattaagtctctgctgggaatcccttttgcacagattgcagcaggaggagct
catagtcttgtactaactctttctggagccatttttggatggggacgcaacaaatttggg
cagctgggtcttaatgatgataatgacagatatgttcctaccctgctaaaatcgttgaga
actcagaaagttgttcatatatgttgtggagaagatcatactgctgctcttacaaaggaa
ggtggggtttttacatttggagctggaggctatggtcagttgggtcataactctaccagc
catgaaataaacccaaggaaagtttttgaacttatgggaagtgttgtcacacaaatcacg
tgcggaaggcagcacactactgcatttgttccttcatctggaagaatatattcttttgga
ctcggaggtaatgggcaattaggtacgggaacaacaagtaataggaaaagtcccttcaca
gtgaaaggaaactggcttccttacagtaatcagtgcccactaaccacaggcagtgaggaa
tacttctgcgtaaagaggattttttctggtggagaccaaagttttgcacactactttaat
ccacagaacatggtgccaccagatgatttcaggtatcctgactttttgaagcagatctgg
actgtgaatgaaacatttattcagagattgttgactttcccatctggaagacttcctgca
gagatagctaatgagatcgatggaacgttttcctcagctgggtgcctgaatgggagcttt
ttggctttgagcaacgatgatcattacaaaaccagcgttagattctcaggggttgatatg
aatgctgctagactgctatttcacaaacttatacagcctgaccatgctcatatatcgcaa
caggttgcagctagtttggaaaagaaccttattcccaaattgacgagctccttaccagat
gttgaagccttgaggctgtatctcactctaccggagtgcccactgatgagtgatgcaaac
aattttacaacattagctattccttttggaacagctattctgaacctagaaaaagctccc
ctgaaagttcttgaaaattggtggtctgtacttgaacctccattgttcctcaaggtagtg
gaactctacaaggatgtcgtagtccacctcttgaagttgtacaagattggcctccctact
tctgaaagaagagtatttaccagttttctacacactgctttcagagttctggaaattttg
cataaagtaaatgaaagaggacaagttatacagtatgacagattttatattcatgagata
caagatttgatagatatcagaaatgactatttcaactgggtccagcagcaggtatttgga
atggatgtcaaccatggattaactgagctaacagatattcctgttacaatttgcacatac
ccatttgtatttgatgcccaggcaaagacaactctcttgcaaacagatgcagtcattcag
atgcagatggctgttgatcaggctcacaggcagaatttatcctctctctttctaccagta
tttgaatctgtcaacccttgcctaatcttaatggtgcgaagagacaatattgtaggagat
gcagtggaagtcctaaggaaaaccaagaacgtagactacaagaaaccgctcaaggttatt
tttgtaggggaagaagctgttgatgctggaggtgttcgcaaagaattttttttgcttatc
atgagagagttgctagatcccaaatatggaatgttcaggtattatgaagagtccaggctc
atctggttctctgataagaccttcgaagacagtgacttgtttcatttgattggcgttgtc
tgtgggctagcaatatataattttactattgtagaccttcatttcccattggctttgtac
aaaaagctgttgaataaaaagccatccctggatgacttaaaagagttgatgccagatgtt
ggcaggggtatgcaacagttactggactatccggaagatgacatagaggaagcattttgt
cttaattttactatcactgtggaaaattttggtacaacagaaatcaaagagcttgttcct
aatggtgctgacattcctgtagtaaaacaaaataggcaagattttgtagatgcctatgtg
gattacatcttcaataaatctgtggcttccttattcagtgcattccacgcaggcttccac
aaagtgtgcggaggcaaagttcttcagctcttccagcccagcgagttgcaggcaatggtg
attgggaacacaaattatgactggaaggagttggagaagaatacagaatacaaaggagag
tactgggcagaccatcctacaattaaaatattctgggaggtttttcatgagttgtccttg
gagaagaaaaaacagtttctattgtttctgacaggcagtgatcgtattccaattcttgga
atgaagtgtcttaaactagtcatccaaccaacgggaggtggagaaggttatcttccggta
gctcacacttgctttaatcttcttgatcttccaaaatacacagataaagaaaccctaaaa
tctaagctgatccaggctatagatcactatgaaggtttcagtttagtataa
DBGET
integrated database retrieval system
