Struthio camelus australis (South African ostrich): 104144923
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Entry
104144923 CDS
T08512
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1 isoform X1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04622
RIG-I-like receptor signaling pathway
scam05164
Influenza A
scam05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104144923 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104144923 (IFIH1)
05168 Herpes simplex virus 1 infection
104144923 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
scam04054
]
104144923 (IFIH1)
Enzymes [BR:
scam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104144923 (IFIH1)
Pattern recognition receptors [BR:
scam04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
104144923 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD_2
SWI2_SNF2
CARD
DUF3638
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104144923
NCBI-ProteinID:
XP_009674445
Ensembl:
ENSSCUG00000009920
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MRTMQVAEKCLQMDIFQVEDLERIQTVTENRGNRDGARELLSRIVQKKDWFSPFLIALRG
TQHEDLADDLSGNTGGIENRENEMNNRTNEETEVTRQPGHAIVEDFKQQENMNDRLASES
NVLERSIGENSVASESDVCIGDGSVSNMNANLAQSGSTTSDSDEDDMESRASPEPDLTLR
DYQMEVAKPALNGENIVICLPTGSGKTRVAVYITKDHLDKKRRASKPGKVIVLVNKVPLV
EQHLRKEFQPFLKRWYQVIGLSGDSQLKISFPEVVRRNDVIISTAQILENSLLNATKEDE
EGVRLSDFSLIIIDECHHTQKEGVYNNIMRRYLKEKMKNEKLAKENRPLIPQPQILGLTA
SPGVGGATSYLKAEEHILKKEHSILSQFCANLDACRIMTVEEHASQLRNQVKEPYKKTVI
ADDKRRDPFREKIIEIMTDIQNYCQLHPKSEFGTQPYEQWVIREEKKAAKEEKRKERVCA
EHLKKYNDALQINDTIRMVDAYNHLSNFYKEEKSKKTIVSDDEDEPAVSKQDETDEFLIG
LFYAKKKQLKKLARNPEYENETLTQLRNTLMEEFTKTDEPRGIIFTKTRQSAFALFQWIK
DNTKFEEVGIKAHYLIGAGHNSEIKPMTQNEQREVIGKFRNGSVNLLIATTVAEEGLDIK
ECNIVIRYGLVTNEIAMLQARGRARADESTYALVASSNSGAVEREDVNSFREKMMYNAIQ
RVQKMPQKEYLKKIQTFQLQSIMEKKMKAKRDQCKTYKKNPSLITFLCKNCHKLVCSGED
IQVIENMHHVSVKKDFQSLYDKRENKTLQDKHADYQTNGEIICKDCGQAWGNMMVHRGLD
LPCLKIKNFVVVFEDKKTTKQIFKKWGELPVRFPVFDYAGHCPSSDED
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgcggaccatgcaggtggccgagaagtgcctgcagatggacatcttccaggtcgaggac
ctggagcggatccagactgttactgaaaatcgtgggaacagagatggtgcaagggaactg
ttaagtagaatagttcagaagaaggactggttctccccttttttgatcgctttgcgtgga
acccaacatgaagaccttgcagatgatttaagtggaaatacgggaggaatagaaaataga
gaaaacgaaatgaataacaggacaaatgaagaaacagaagtcacaaggcaaccgggacat
gctatagtggaggatttcaaacagcaagaaaatatgaatgacaggttagccagtgagagt
aacgttttggaaagatctattggagagaattctgtagcttcagagtctgatgtctgtata
ggagatggaagtgtcagtaacatgaatgcaaacctggcacagagcggcagcacaaccagt
gattcagatgaagatgatatggaaagcagagcttcacctgagccagatctgaccctgaga
gattaccagatggaagttgcaaaaccagcactgaacggggagaatattgtcatatgtctc
cctacaggcagtggtaaaaccagagtggctgtttacattaccaaagatcacttggataag
aagagaagagcatcaaagcctggaaaagttatagtacttgttaataaggtaccattggtg
gaacagcatttacgaaaggagtttcagccattcctgaagcgttggtatcaggttattggt
ttaagtggtgattctcagctgaaaatctcatttcctgaagttgtcagaagaaatgatgtc
ataatcagtacagcacagatccttgagaattcactgctaaacgcaactaaagaagatgag
gaaggtgtccgcttatcagatttttcacttatcattattgatgaatgtcaccacactcaa
aaggaaggtgtctacaacaatataatgcgacgttacttaaaagaaaagatgaagaatgag
aagctggcaaaagaaaacagaccactaattccacagcctcagattctgggacttacagcc
tcacctggtgtaggaggtgcaacatcctatttgaaagctgaagaacatattctgaaaaaa
gaacactctattttgtcccagttctgtgccaatcttgatgcatgtagaatcatgactgtt
gaagagcatgcctcccaactgaggaatcaggtgaaggaaccatataagaagactgtgatt
gcagatgacaaaagaagggatccgtttagagagaaaattatcgagatcatgaccgacatt
caaaactattgccagctccatccaaaatctgagtttggaactcagccatatgagcagtgg
gtgattagggaggagaaaaaagcggcaaaagaagaaaaacgcaaggaacgtgtgtgtgca
gaacacctgaagaaatacaatgatgctttgcaaataaatgataccattcgaatggttgat
gcatacaatcacctaagtaacttttataaggaggaaaaaagcaagaaaacaatagtgagt
gatgatgaggatgaaccagcagtatcaaaacaggatgaaacagatgaatttctaataggt
ttattttatgcaaaaaagaaacagctgaaaaagttggctagaaatccagaatatgaaaat
gagacgctaacacagctgcgaaatactttaatggaggagttcaccaagactgatgaacca
agaggaattattttcacaaagacccggcaaagtgcctttgctctgtttcagtggattaag
gataacacaaaatttgaagaagtgggaattaaagcccattatcttattggcgctggacac
aacagtgaaattaaacccatgactcagaatgagcaaagggaagtcattggtaaattccga
aatggaagtgtaaacttactcatcgctactactgtagctgaggaaggcctggacatcaag
gagtgtaacattgttattcgctatggccttgtcaccaatgaaattgctatgttgcaggcc
cgtggtcgagctcgagctgatgagagcacctatgcacttgtggcttcaagcaactcagga
gctgttgaacgtgaggatgttaatagtttccgtgagaaaatgatgtataacgccattcag
cgtgtccagaagatgccacagaaagagtatttaaaaaagattcagaccttccagttgcaa
agtataatggaaaaaaaaatgaaggcaaagagagatcagtgtaagacatataagaaaaat
ccttcactaataacattcctatgcaaaaattgccacaagctggtatgttcaggagaagat
atacaagttattgaaaacatgcatcatgtcagtgtgaaaaaagatttccaaagcctttat
gataaaagagaaaataagacactgcaagataaacatgctgattaccagacaaatggggaa
attatatgtaaagactgtggacaagcttggggaaatatgatggttcaccgaggtcttgac
ctgccttgtctaaagattaaaaattttgtggttgtgtttgaagacaagaaaacaacaaag
caaatttttaagaaatggggagaactgccagtcaggttccctgtttttgattatgcaggt
cattgtccttcaagtgatgaagattaa
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