Struthio camelus australis (South African ostrich): 104145024
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Entry
104145024 CDS
T08512
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
scam00536
]
104145024 (COL13A1)
Glycosaminoglycan binding proteins [BR:
scam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104145024 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104145024
NCBI-ProteinID:
XP_009674629
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MEAAILGRVDQLLDEKLKFHLPRHREVRDVHQRCNCPAGPPGDKGAMGIPGRPGAPGEAG
MSIIGPRGPPGQPGTRGFPGFPGQCAEYPHRGGAGEPGKPGRDGKGLPGPPGPKGDAGIQ
GYPGRKGEVGESGLPGARGLPGATGPKGSPGMAAAGMKGEPGTPGEKGEPGVPGRMGPPG
LPGKRGQRGEKGRAGDPGLPGLPGPKGEKGNTENALDGGKGEPGPPGLPGPPGPKGEAGD
VGLPGTAGSRGEKGEPGAPGEQGPMGPRGPKGEPGKDEMMDYDGNISEALQEIRTLALMG
PPGLPGVAGPPGPPGQKGEIGLPGPPGHDGEKGPRGKPGEMGPPGPHGLPGKNGPPGVKG
EPGHTGASGEKGEKGEPGRAGLPGLDGPTGEKGERGDQGMPGPSGLPGPIGLPGLTGEKG
EPGERGDKGNPGESISGPPGPQGPPGPPGLQGLPGPKGEAGIDGMKGEKGVQGEKGDRGP
LGLPGASGLDGRPGPPGTPGPSGVSGPAGPKGERGSKGDPGVVGPMGPAGLPGLQGLPGD
RGIRGERGKKGSRGSKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggctattttgggaagagttgaccaactgctcgacgagaaattaaagttccac
ttgccgagacatcgagaagttcgagacgtgcaccagcgatgcaactgcccggcaggtccg
cctggggacaaaggcgccatggggatccctggacggccgggcgctccgggagaagcaggc
atgtccatcatcgggccccgcggtccacccgggcagcctgggacaagaggttttcctggg
ttcccgggccagtgcgccgagtacccgcacaggggcggagcgggagaacctgggaagccc
ggcagagatggaaagggcttacctgggcctcctggaccaaagggagacgctggaattcag
ggataccccggcagaaagggtgaggtgggcgagtcaggcctgcccggtgcacgcggcctc
cccggagctactggccccaagggctctcctgggatggctgctgcagggatgaagggcgaa
ccggggactccaggagaaaagggagagcctggagtcccagggaggatgggccccccaggt
ttgccagggaaaagggggcagcggggtgagaagggccgagctggcgaccctgggctgcct
ggactcccaggcccaaagggagagaagggaaatactgagaatgccttggatggaggtaaa
ggggaacccggcccaccaggcttgcctggtccccctggaccaaagggagaagctggtgat
gttggcttgcctggcactgcaggatcccggggggaaaagggagaacctggtgcacccgga
gagcagggacccatgggcccacggggccctaagggagagcctgggaaggatgaaatgatg
gactatgatggtaacatcagtgaagctctgcaggaaatacgaactttggccttgatggga
cccccaggacttccaggtgtggctggacctccagggccaccggggcagaagggtgaaatt
ggtttgccgggtcctccgggccacgatggagagaaggggccacgaggcaagccaggagaa
atgggcccccctggccctcatggactgccaggaaagaatggaccgcctggagtaaaggga
gaaccaggacacactggggcctcaggagaaaagggggagaaaggagagccaggacgagct
ggcttaccaggtcttgatggcccgactggagagaaaggagaacgaggtgaccaagggatg
ccaggaccatcaggattgccgggtcccattggacttccaggattgacaggagaaaaggga
gaacctggggagcgtggagacaaaggaaatccaggagaatcgatatcagggcccccggga
ccccaaggcccaccaggacctccgggtcttcagggccttccaggaccgaagggggaagca
gggattgatggaatgaaaggagagaagggtgtccagggtgaaaaaggagacagagggcca
ctgggattacccggtgcttcaggtttagacggcaggcctggaccaccgggtactccagga
ccaagtggggtttcgggaccagcaggaccaaaaggcgaaaggggcagtaaaggagatcct
ggagttgtaggaccaatggggccagcagggcttcctggtttacaaggcctacctggtgac
agaggaatccggggggagaggggcaagaaaggctctagagggtctaaaggggataaggga
gaccaaggagcgcctggattagatgcaccctgtccgttgggagaagatggcctgccagtt
caaggctgctggaataagtga
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