Struthio camelus australis (South African ostrich): 104145356
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Entry
104145356 CDS
T08512
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scam03041
]
104145356 (DDX1)
03016 Transfer RNA biogenesis [BR:
scam03016
]
104145356 (DDX1)
Enzymes [BR:
scam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104145356 (DDX1)
Spliceosome [BR:
scam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104145356 (DDX1)
Transfer RNA biogenesis [BR:
scam03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104145356 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
104145356
NCBI-ProteinID:
XP_009675127
Ensembl:
ENSSCUG00000008295
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE
TLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATR
GVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEF
TMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPQHVRNQALFAACVLKNAELKFNFGEDD
FKFPPKDGYIALCKAPDGSVVKSQHTGNAQVVQTQNLPNAPKALIVEPSRELAEQTLNNV
KQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLNLSQVRF
LVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP
TWVDLKGEDSVPETVHHVVVLVNPKADKLWERLGKNHIRTDEVHAKDNTRPGANTPEMWS
EAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQFSCVCLH
GDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV
GRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHL
NCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEKEAQTSF
LHLGYLPNQLFRTF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttatgccagagatagctcaagcagtggaggagatggactggcttctccccaca
gatattcaagcagagtctatcccactaattctaggaggcggtgatgtgcttatggctgca
gaaacagggagtggaaaaactggtgcttttagcattccagttatccagatagtttatgaa
acattgaaggaccagatggaaggcaagaaagggaaagcaacaattaaaactggtggagca
gtgctcaacaaatggcaaatgaacccgtatgatagaggatcagcttttgcaattggatca
gatggcctatgttgtcaaagcagagaagtaaaagaatggcatggatgcagagcaaccaga
ggcgtgactaaaggaaaatactactatgaagtttcctgtcatgaccaaggcttgtgcaga
gttggctggtcaactatgcaggcttcattagacttgggcactgataaatttggctttggc
tttggtgggactggcaagaagtctcacaataagcaatttgacagctacggtgaggaattt
actatgcatgatacaattggatgctatctagacatagataaaggacaaataaaattttcc
aaaaatgggaaagaccttggccttgcctttgaaatcccacagcacgtacggaaccaggca
ctctttgctgcttgtgtactgaagaatgctgaattgaaattcaattttggtgaagacgac
ttcaagtttccaccaaaagatggctatattgccctttgcaaagctcctgatggcagtgtt
gtaaaatcacaacacacaggaaatgcgcaagtggttcaaacacagaaccttccaaatgct
ccaaaagcattgattgtagaaccatcgagagagctggcagaacagactttgaacaatgtg
aagcagttcaaaaaatatgttgataatcccaaattaagagagttgctgattattggtggc
gttgctgcaagagatcaactctctgtgctggaacaaggagtggacatagttgtgggaact
cctggaagactggatgacctggtctcaacaggaaagcttaacttatctcaagttagattc
ctggttctggatgaagctgatggtctccttctccaaggttattcagacttcataaacagg
atccacagtcagattcctcagataacttcagatggaaagagacttcaggtgattgtgtgc
tctgcaacgttgcattcttttgatgtgaaaaaactatctgaaaagatcatgcattttccc
acctgggttgacctgaaaggagaagattctgtccctgaaactgtgcatcatgtagttgtg
cttgtaaatccaaaagctgacaaactctgggaaaggcttggcaagaatcacatcagaact
gatgaagtacatgcgaaagataatacacgacccggtgctaacactccagaaatgtggtct
gaagctattaaaattctgaaaggagagtacactgttcgggcgatcaaagaacacaagatg
gaccaagccattattttctgtaggactaaaatagattgtgataatatggagcaatacttc
atccaacagggcggaggccccgataggaagggacatcagttctcatgtgtctgtctgcac
ggtgacagaaaacctcaagaaagaaagcaaaacttggaaagatttaagagaggagatgtc
cgtttcttgatctgcacagatgttgctgctagaggaattgatattcatggtgttccgtat
gttatcaacgtcacactccctgatgaaaaacagaactatgttcatcgaattggaagagta
ggcagagctgaaaggatgggtctggcaatctcccttgtggcaaaagaaaaagaaaaggtt
tggtatcatgtatgcagtagccgtggaaaaggatgttataacactagactgaaggaagaa
ggaggctgtactatttggtacaatgaaatgcagttgctgggagagattgaagaacactta
aactgcactattgcccaagttgaaccagacataaaagtaccagtagatgattttgatggg
aaggttacttatggacagaaaagagctctgggtggtggactctataaaggccacgtggat
atcttggcacctacggtacaagagctggctgcccttgaaaaggaagctcagacatctttc
ttgcatcttggctaccttcctaaccagctgttcagaacgttctga
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