Struthio camelus australis (South African ostrich): 104145395
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Entry
104145395 CDS
T08512
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam02010
ABC transporters
scam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104145395
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104145395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scam02000
]
104145395
Transporters [BR:
scam02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104145395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
104145395
NCBI-ProteinID:
XP_009675189
Ensembl:
ENSSCUG00000008578
LinkDB
All DBs
Position
Unknown
AA seq
2156 aa
AA seq
DB search
MLLCCLQTQFQLLIEVTWPLFIFCILISVRLSYPPSEQHECHFPNKAMPSAGSLPWIQGI
ICNVNNPCFRYPTLGESPGVIGHASIVSRLFSDVKRLVLYSRKDTSIKDVQKVLGTLQKL
RNSGSDLKLQDFLVDNETFSDFLHHNVSMPPFAVDKLLNTEVNLQQVIVSGYQMQVQDLC
NASVLSEFFTIQNQSVAMDHEAFICTVPKEKLHAAEWAFHSNLDPMKPLQKRIPFNSSLW
DLSETIETLTESLGKLVKELLSMKSWSDMRQEVMFLTNVNASSSSTQIYQAVSRIVCGHP
EDGGLKIKSLNWYEDNNYKALFGDNSTEDDITNFYDNSTTPYCNELMSPLSRIIWRALKP
LLIGKILYAPDMPAIRNVMFEVNRTFQELGVFRDLRGMWEEISPKIWTFMESSQEMDLIR
TLLKSKGLQDLSLPASNWTVENVACFLSKHPEEFKTANGSVYTWVDAFNETDWAIQTISH
FMECVNLDKLEPVATEVQLINKSLELLGEKRFWAGIIFTKITPNSIDLPHHIKYKISMDI
DNVERTNKIKDGYWDPGPRADPFEDMHYVWGGFAYLQDMVEQAIIRVQTGTEKTTGVYVQ
QMPYPCYVDDIFLQVMSHSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGI
LWLSWFISSLIPLLMSAGLLVLILRMGKLLPYSDPSVVFVFLSIFAIVTILQYFLISTAF
SRANLAAACGGIVYFMLYLPYVLCVAWQDHVSFSLKIFASLLSPVAFGFGCEYFALFEEQ
GVGVQWDNFFERPLEEDGFSITTSAIMMMFDTFLYGVMTWYIESIFPGQYGIPRPWYFPF
TKSYWFGEESQDRQHPHPDQKGPSKVCKEEEPTHLCLGVSIQNLVKVYSDDKKIAVDGLT
LNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFILGKDIRSELSTIRQNLGVCPQ
HNVLFDLLTVEEHIWFYAHLKGLSEKKVKEEMEQMAMDYSLPLKLKARTSKLSGGLQRKL
SVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEAAILGDRI
AIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKAVDSSLSPYRNSSNTVSYLKKDDSVSQS
SSDAGLGSDHESDTLTIDVSAISNLIMKHVPEARLVEDIGHELTYVLPYEAAREGAFVEL
FHEIDDHLSDLSISSYGISETTLEEIFLKVDDSGVDAETSDGTLPARRNRHVFGERQSCL
RPFTEDDAFDPNDSETDPGNGRQQFMALLWKRLLIAKRSKKGFFAQIVLPAIFVCIALMF
SLIIPPFGKYPSLELQPWMYDEQYTFIRDTPCTAGQKEWTTASVPDSVLDILKGNWTMEN
PSLSCECSNEMIKKMLPVCPSGAGGLPPPQREQDTADILQNLTGRNISDYLVKTYTQIIG
KSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQVKKILELAQGGSGDRFLNSLV
SFMKGLDTKNNVKVWFNNKGWHAIVSFLNVINNAILRANLQQGKNPSVYGITAFNHPLNL
TKQQISEVALMTTSMDVLVSVCVIFAMSFIPASFVVFLIQERVSKAKHLQFISGVKPVIY
WLANFVWDMCNYVVPATLVIIIFICFQQKSYMSSSNLPVLALLLLLYGWSITPLMYPASF
VFRIPSTAYIVLTSVNLFIGINGSVATFVLELFTNNKLNNINDILKSLFLIFPHFCLGRG
LIDMVKKQAMADALERFGENHFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIKP
RPVYAKLSPVNDEDEDVTRERQRIISGGGQSDILEIKELTKVTEGLCIHLFLPKMVLCTC
KILTKGVLFHSILSNMQEVHQNMGYCPQFDAVNELLTGQEHLEFFALLRGVPEKEVCKVG
EWAIQKLGLVKYGEKRVGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARHFLWN
CALSVIKEGRSVVLTSHSMEECEALCTCMAIMVNGRFRCLGSVQHLKNRFGDGYSIVVRI
AGANPDLKSAEEFFGLAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIED
YSVSQTTLDQVFVNFAKDQSDDDHTKDLSLHKKQTVVDIAILNSFLQDEKAKESCV
NT seq
6471 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgtgttgcttgcagactcagtttcagctgctgattgaagtcacttggcctctc
tttatcttctgcatcctcatctctgtaagactttcatatccaccctctgaacagcatgaa
tgtcacttcccaaacaaagccatgccttcagcgggatccttgccttggatacagggcatt
atttgcaatgtcaacaacccttgcttccgctacccaactcttggggaatcccctggtgtc
attggacatgcctctattgtttcccgcctgttctcagatgtcaagaggttagtcttgtac
agccgaaaggacacaagcataaaggatgtccagaaggtcctgggaacactgcaaaagttg
agaaactctggctcagacttgaaacttcaggatttcctggttgacaatgagacattctca
gacttcctccatcataatgtgtctatgccaccatttgcagtagacaagctactgaacact
gaggtcaacctccaacaggtcattgtgtctggctaccaaatgcaagtgcaagatctctgt
aatgcctcagtgctctctgaattttttacaatccaaaaccagtcagtggctatggaccat
gaagccttcatttgcactgtaccaaaggaaaaactccatgcagcagaatgggccttccat
tctaacctggaccctatgaagcccctccagaaacgaatccctttcaattcctccttgtgg
gatctgtcagaaaccatagagactttaacagagagccttgggaagcttgttaaagagttg
ctgagcatgaagagctggagtgacatgaggcaagaggtaatgttcctgaccaacgtgaat
gcctcaagctcctctacacagatttaccaggctgtgtcacgcattgtgtgtggccatcct
gaagatggagggctcaaaatcaagtctctcaactggtatgaggacaataactacaaagcg
ctctttggagacaacagcactgaagatgacataactaatttctacgataactccacaaca
ccctattgcaatgagctgatgagcccactttctcgaattatttggagggctctgaaaccc
ttgctgattgggaagatcttgtacgctcctgacatgccagccataaggaatgttatgttt
gaggtgaacaggacgttccaggagctgggtgtgtttcgtgacctcagagggatgtgggag
gagataagcccaaagatttggacatttatggaaagcagccaggaaatggatctgattcgg
acactgctgaaaagcaaaggtctccaggacctgagcttgcctgcttcaaactggacagtg
gagaatgttgcttgtttcctgtcaaagcacccggaggagtttaagacagcaaatggctca
gtgtatacctgggtggatgccttcaatgagacagactgggctattcagaccatctcccac
ttcatggagtgtgtcaatctggacaaactggagcctgtggccacagaagtacagcttata
aacaagtccttggagctgctaggtgaaaagagattctgggctggcatcattttcaccaaa
atcactcctaacagcatagacctccctcatcacatcaaatacaaaataagcatggacata
gacaatgtggaaaggaccaacaagatcaaggatgggtactgggaccctggtccccgggct
gacccctttgaggacatgcactatgtttggggaggctttgcctacctgcaggacatggtg
gaacaggccatcatcagggtgcagacaggcacagagaagacaacaggggtttatgtgcag
cagatgccctacccatgttatgtggatgacatatttctgcaagtcatgagccactcaatg
cccctcttcatgactctggcctggatctactcagtggctgtgataatcaagggcattgtg
tacgagaaggaagctcggctgaaggaaacgatgaggattatgggactagacaatggcatc
ctatggctgagctggttcattagcagcctcatccctctcctgatgagtgcaggcctgctc
gtgctgatcctcaggatggggaaactgctgccttatagcgatcctagcgtggtgtttgtt
ttcctctcgatctttgctattgtgaccatcctccagtacttccttatcagcactgcattc
tccagggccaacctggcagctgcctgcgggggcattgtctatttcatgctgtacctaccc
tatgtgctgtgtgttgcctggcaggaccatgtcagcttctcgctcaagatctttgcgagc
ctgctgtccccagtagcctttggctttggctgtgagtactttgcactgtttgaggagcag
ggagttggtgttcagtgggacaacttctttgagaggcctttggaagaagatggcttcagc
atcaccacatctgccatcatgatgatgtttgataccttcctatatggggtcatgacctgg
tacattgagtccatcttcccaggccaatatggcattcccagaccctggtacttccccttc
acaaagtcatattggtttggtgaggaatcacaagacaggcagcaccctcaccctgaccag
aaggggccttcaaaagtctgcaaggaggaagagcccacgcatctgtgccttggggtttcc
atccagaacctggtcaaggtttatagtgatgacaagaaaattgctgtagatggtctcaca
ctgaacttctatgaagggcaaatcacctcctttctgggacataacggagctgggaaaacc
actaccatgtccatcttgactggcttgtttcctccaacctcgggtacagccttcatcctg
ggcaaagatatccgctctgagcttagcaccattaggcagaaccttggtgtctgtccacag
cacaatgtgctgtttgacttgctgactgtggaagaacacatctggttctatgctcatctc
aaagggctgtcagaaaagaaggtgaaagaggaaatggagcagatggcaatggattatagt
ttgcctctcaaactcaaagctagaacaagcaaactctctggtggcttgcagaggaagctc
tcggtagccttggcctttgttggtgggtccaaggttgtcattctggatgagcccacagct
ggggtggatccttattctcgcagagggatatgggaactgctgctgaagtatcgacaaggc
cgcacgatcattctctccacgcatcacatggatgaggcagccattctgggggaccgaatt
gccattatttctcatggcaagctgtgctgtgttggttcctctctattcctgaagaaccag
ttaggaacaggctattatttgaccctagtcaagaaggctgtggattcctctctgagcccc
taccggaacagcagcaacacagtgtcttatctgaaaaaggatgacagtgtctcccagagc
agctctgatgctggccttggcagtgaccatgaaagcgacaccttaacaatagatgtttct
gcaatttctaacctcattatgaaacacgttcctgaggccaggctggtggaggatattggc
catgaattaacctacgtcttgccatacgaagctgctagagagggagcttttgtggagctg
ttccatgaaatcgatgaccacctttctgatctcagcatttccagctacggcatctctgaa
accaccctggaggaaatcttcctcaaggtggatgacagtggtgtggatgcagaaacctca
gatgggacactaccagccagaaggaataggcatgtgtttggagaaagacagagctgcctt
cgcccattcacagaagacgatgcttttgaccctaatgattcagagacagatccaggtaat
ggtcggcagcagttcatggctctgttgtggaagaggctgcttattgctaagcgaagcaag
aagggcttctttgctcagattgtgttgccagccatctttgtgtgtattgctctcatgttc
agcctgatcattcctccctttgggaagtaccccagcctggaattacagccctggatgtat
gatgagcagtacacttttatcagagacactccttgcactgctgggcagaaggaatggacc
actgcctcagtcccagactcagtcctggatatcttgaaaggcaactggaccatggagaac
ccttccctgtcttgtgagtgcagcaatgagatgatcaagaagatgctgcctgtgtgtccc
tctggtgcaggtgggctgccacccccacagagagaacaagacactgctgacatcctccag
aacctgacaggccgcaatatatcagactatctagtgaagacctatacacagatcattggg
aaaagcttaaagaataagatctgggtgaatgagttcaggtatggtggcttttccctggga
gccagcagttccctcatgcttcctccaagccacgaagtcactgatgccattaaacaagtg
aagaaaatcttggagctagcacaggggggttctggagatcggtttctcaacagcttggtg
agcttcatgaaaggcctggatacaaagaacaatgtgaaggtgtggttcaacaacaagggc
tggcatgccattgtctccttcctgaatgtgataaacaatgccatccttcgggccaacctg
cagcagggcaagaaccccagtgtttatggcatcactgccttcaatcacccactcaacctc
accaagcagcagatctctgaagtggccctgatgaccacctccatggatgtcttagtctca
gtctgtgtgatctttgccatgtccttcatccctgccagcttcgtggtcttccttatccag
gagcgggtcagcaaggccaaacacttacagttcatcagtggtgtgaagcctgtgatctac
tggctggctaactttgtctgggatatgtgcaactatgttgttccagccacgctagtcatc
atcatcttcatctgcttccagcagaagtcctatatgtcctcctccaacctgcctgtgctg
gcccttcttctgcttctctatgggtggtctatcacccctctcatgtatccagcatccttt
gtgttcagaatccccagcactgcatacatcgtgctgaccagtgtgaacctcttcattggc
atcaatggtagtgtggctacctttgtcctggagctcttcaccaacaacaagctgaacaac
atcaatgacattctgaagtctctcttcctcatctttccccacttctgccttgggcgggga
ctcattgacatggtgaaaaaacaggccatggctgatgctctggagaggtttggggagaat
cattttgtgtcccctctgtcatgggatttggtggggcggaacctctttgccatggcagtg
gagggtgtagtcttcttcctcatcactgtgctcatccagtacaggttcttcatcaagccc
aggcctgtatatgccaagttgtcccctgtgaatgatgaagatgaggatgtaaccagagag
agacagaggataatcagtggaggaggacaaagtgatattttggaaatcaaagaactaacc
aaggtgacagaagggctctgcattcatcttttcttacctaaaatggttttatgtacttgt
aaaattctaacaaagggagttctcttccacagtatcttgtccaacatgcaagaagtccat
cagaacatgggctactgcccacagtttgatgctgttaatgaactgctgacagggcaagaa
catctggagttctttgcactcttgagaggtgttccagagaaagaagtctgcaaggttggg
gaatgggcaatccagaaactgggccttgtcaaatatggagaaaaacgtgtggggaactac
agtggagggaacagacgcaagctctccacagctattgctcttattggggggccacctgtg
gtgttcctggatgagccaacaacaggaatggatcccaaagcacgtcatttcctatggaac
tgtgctctgagtgtcatcaaggaggggagatcagtggttctcacatctcacagcatggaa
gaatgtgaagccctgtgcacttgtatggcaataatggtcaatgggcggttcaggtgtctg
ggcagtgtccagcatttaaagaacaggtttggagatggctatagcatagtggtgcgaatc
gcaggggcaaacccagacctgaagtcagctgaggaattctttgggcttgcctttcctgga
agtgtcctgaaggaaaagcatcggaatatgcttcagtaccagcttccttcttcaccatct
tccctggccagaatatttagcatcctctcccagaacaaaaagagactccacattgaagac
tactctgtttctcagactacacttgaccaagtatttgtaaattttgctaaggatcaaagt
gatgatgaccacactaaggacctgtcactgcacaaaaaacagactgttgtggacattgca
atccttaattcctttctgcaagatgagaaggcaaaagaaagttgtgtgtga
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integrated database retrieval system
