Struthio camelus australis (South African ostrich): 104145415
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Entry
104145415 CDS
T08512
Symbol
PRDM1
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scam03000
]
104145415 (PRDM1)
Transcription factors [BR:
scam03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104145415 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
104145415
NCBI-ProteinID:
XP_009675213
Ensembl:
ENSSCUG00000008787
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MRIKGCFLIFQAATQCSSDAVSFKDLVKGREWTMKMDMEDADMTQWTEADFEEKCTYIVK
DHPWDPSADGGTLTQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTS
DTVPKNANRKYFWRIYSNGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIY
FYTIKPIPANQELLVWYCRDFAERLHYPSSRELTMMNLTQTHVNPKQHSADKDELCQKSI
PKKEHSVKEILKMESNPPKGKDFFQTNISPVAPEKDLDDLRRNYSPERCFFPRVVYPIRP
HVPEDYLKASLAYGMDRPSYITHSPIQSSTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPL
APTSQEHRESYSYVNGSYGSEGLGSYPGYAPPSHLPSAFLPSYNPHYPKFLLPPFNMSCN
NLSALNNINGINNFSLFPRMYPLYGNLLSGGSLSHHMLNPATLPSSLPSEGGRRLLQPDH
PRDFLIPAPNSAFSITGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGG
RSPEIFXKDEEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHL
RVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHS
GEKPYQCKLCPAKFTQFVHLKLHKRLHTREHPHKCIHCHKSYIHLCSLQVHLKGNCPVAP
ASGLSMENLNRINEEIEKFDVSDNADKLEEMEDNIDLTSIVEKDILTMLRREMEGANLKV
SLQRNLGNGLISSGCNLYESSDMSIMKLPHGHPLPLLPVKVKQETVEPMDP
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaaaggctgttttcttattttccaggctgctacacagtgtagctcggacgct
gtgagtttcaaggatctggtgaaagggagagagtggacaatgaaaatggacatggaggat
gctgatatgacccagtggacggaagccgattttgaagagaaatgcacctacattgtaaaa
gatcacccgtgggatcccagcgccgatggaggcaccctaactcaggcagaggcttccttg
ccaaggaacttgactttcaaatacgcatctaactgcaaagaggtcactggagtgataagc
aaagagtatatcccaaaaggaacacgctttggacccctggtaggagagatctataccagc
gatacggttcccaagaatgcgaacagaaaatacttttggcggatctattccaatggtgag
cttcaccacttcattgatggatttaatgaggacaagagcaactggatgcgttatgtaaac
ccaggctactctgtccaggagcagaacttggctgcttgtcagaatggaatgaacatctac
ttctacaccatcaagcccatccctgccaaccaggagctgctcgtgtggtattgtcgggac
tttgcagagaggctccactacccctcttccagagagctgacgatgatgaacctcacacaa
acccatgttaatccaaagcagcacagtgctgataaagatgagctctgtcagaaaagcatc
ccaaagaaggagcacagtgtgaaagaaatcctgaaaatggaatccaaccctccgaaagga
aaagacttcttccagaccaacatttcaccagttgctccagaaaaagacttggatgatttg
cgcaggaactatagccctgagaggtgtttcttccctcgagttgtctatcctatccgacct
cacgttcctgaagactatctgaaagcttccttagcgtatgggatggacagacccagctac
attactcactcacccatccagtcatctactacaccgagtccttctgggaggagcagccca
gaccaaagtttaaaaagttcaagccctcacagcagtccaggggtcacagtttcacctctg
gcacctacttcccaagagcacagagagtcatactcttacgtgaatggctcatacggctca
gaaggattggggtcttatcctggatacgcaccccccagccatctcccgtctgcctttctc
ccatcctataacccccactaccccaaattcctgttacctccgttcaatatgagctgtaat
aacctgagcgctttgaacaatatcaatggcatcaacaatttcagtctcttcccaaggatg
tatcctctttatggcaacctgctcagtggaggtagtctttcccaccacatgttgaatcca
gccacgctccccagttcattgcccagcgaaggaggccgtcgactgctgcagcctgatcat
ccaagagacttcctcataccagcacctaacagtgccttctctatcacgggcgctgctgcc
agcatgaaggacaagccatgcagccccaccagcgggtcgcccaccgctggtacagcagcc
agttcagaacacataatgcaacctaaacctacctcagtggtgttggctgccaccggcggg
agaagccctgaaattttttaaaaagatgaagaagccatgaatcttattaaaagtaagagg
aatgtgaccggttacaaaacccttccatacccactgaagaagcagaacgggaagatcaag
tatgaatgcaatgtctgctccaagacctttggccagctctccaatctgaaggtccacctc
cgagtacacagcggagagagaccgtttaaatgccagacttgcaataaaggcttcacacag
ctggcgcacctccagaagcactatctggtacacacaggagaaaaaccccacgagtgtcag
gtttgtcacaagcgattcagcagcaccagcaatctcaaaacccacctgcggctccactct
ggagagaagccttaccagtgcaagctgtgcccagccaaattcacccagtttgtgcacctg
aagctgcacaagcgtcttcacacccgtgaacatccacataaatgcatccactgccacaag
agctacattcacctctgcagcctccaggtccatctgaagggcaactgccctgtagctcct
gcctccggcctctccatggagaacctgaatcgaatcaacgaagagatagaaaagtttgac
gtcagtgacaatgccgacaagctggaagaaatggaggacaatatcgacttaacatcgatc
gtggagaaggatatactgaccatgctcagaagggaaatggaaggcgctaatctgaaagta
tctttacagaggaacctgggaaatggacttatctcctcaggatgcaacctttacgagtct
tcagatatgtcaattatgaagttgcctcacggtcacccactacctctgttacctgtaaag
gtcaagcaagaaacagttgaaccaatggacccttaa
DBGET
integrated database retrieval system
