Struthio camelus australis (South African ostrich): 104145463
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Entry
104145463 CDS
T08512
Symbol
SCAF8
Name
(RefSeq) protein SCAF8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scam03021
]
104145463 (SCAF8)
03041 Spliceosome [BR:
scam03041
]
104145463 (SCAF8)
Transcription machinery [BR:
scam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104145463 (SCAF8)
Spliceosome [BR:
scam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104145463 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104145463
NCBI-ProteinID:
XP_009675277
Ensembl:
ENSSCUG00000008978
LinkDB
All DBs
Position
Unknown
AA seq
1333 aa
AA seq
DB search
MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA
PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAGGNSPPPFVT
PVLPSTTAAMSNNTPGTPVTPVTPANVVQSLPDPWVSQIANTDTLAAVAQILQSPQGQQL
QQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQSVSFNKKL
MDRFDFGEESEQNEEPKKETPTSQLPLVPESVNNSLFHQLAEQLQQQNLEHLRQQLLEQQ
QPPKASPEENPEGNFGSEHSASPSQGSSQQQFLEVETNVDDSMDIQQQDMDIDEGQDMAE
EEIFEQEEKKSTVRSRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSS
RSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQI
ESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKIGSKIIKIAWALNKGVKTEYKQFWD
VDLGVSYIPWEKVKLDDLDGFAEGGMIDQETVNTEWETARSSEAAKENIQTTQSTAVDKS
TVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFPVTMSVPPPGYSAIPPPPFLRASFN
PSQPPPGFMPPPVPPVVPPPVVPPPVVPPVVPTSLVQPPLPIAQEAMKDVPFTSLVLPVG
TVSSNIATPTLSAGSVFNPLPSNKPESDEKGSHLTDLQISSSENNRSVQNDVSSSSGLVG
GVQPPSVSSSSGLTGEGQPPSVSSSSGLPGAVQPPSVSSSSGLVGAVQPPTVTSSSGLAG
GVQLPSISSSSSLTGGVQLTSVSSSSGLMAGVQPPNVSSSSGLLAGVHPPSVSSSPGLLT
GMQPPIVSSSSGLLAGVQPPSVSSSSGLLIMPPPNVSSSSGLMGVPPPNISNSSGLLAMQ
HPAGVQNMPHLSISNQRMPGMPILDIRPGLMPHSPGPRFPLMQPGIPPQRSIPPPAILDP
SLHPPPRGPFPPGDIFNQTERPFGTPGRQNIDSIANSEKRLPLGGDNIQQEGDRDYRFPP
VENRDNLNRPSPVDVRDSVGRPPVDPREGIGRPPVDGREHFARSHVDMRENFGRPGIDNL
GRREHFGFNSEKHWGQRGDYDEREHHAFPIYGGPKGFHEDRERFRHVNYRFDSRSGPNWN
RGFEQDAHRDFDDRRRPWERQRDRDDRDFNFCREINGNRFGRDRMSNNWIPPPHPRVFEY
FDGATSQRKADNMPQVNGENTETQSQPPAAQVQDDPELYEKLTSSSEINKEKSDTEADIE
SEPVVESTETEGT
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgacacagatcaccaaggcagcaatcaaggctataaagttctacaaacatgtggtacag
agtgttgagaaattcattcaaaagtgcaaaccagaatacaaggtgcctggtctgtatgtc
attgactccattgtgagacagtcccgacatcagtttggacaagaaaaggatgtctttgct
ccaagattcagcaataacatcatcagcactttccagaacttgtatcgttgtcctggggat
gacaagagtaaaattgttagagtgctaaatttatggcagaagaataatgtgttcaagagt
gaaattattcagcctcttttggatatggcaggagggaattctcctcccccatttgtgacc
ccagtcttgcccagcactacagctgctatgagcaacaatacaccaggaacacctgtgact
ccagttactccagccaacgtggtgcaaagtttacctgatccttgggtatctcagattgct
aatacagatacgcttgctgctgtagcacaaattttacaaagtcctcaaggccagcagctt
cagcagttaatacagacactgcagattcagcagcagaaacctcagccttcactacttcaa
gccctggatgctggtcttgttgttcagttacaggcccttactgcacagcttacagctgca
gctgctgctgccaacacgcttaatccactggaacagagtgtctcttttaataagaagctg
atggacaggtttgattttggagaagaatctgaacaaaatgaagagcctaaaaaggaaact
ccaacttcccaactgcctttagtaccagaatctgtgaacaactcactttttcatcagcta
gctgaacaactacagcaacaaaacttagaacatctcagacaacagcttctggagcaacag
cagcctccaaaggcaagccctgaggaaaatccagaaggaaattttggctcagagcactct
gcatcaccttcacaagggagcagtcaacagcagtttttagaagtggaaacaaatgtagat
gattcaatggatattcaacaacaggacatggatatagatgaaggacaggatatggctgaa
gaggagatttttgaacaagaagaaaagaaatcaacagttcgttcaagatcaagaacgcgt
tcaagatctcgttcaaggtcaccaagaaaacgaaggtctagatcacgatctggttctcgt
aagcgtaaacacagaaaacgttcacgctcgagatcaagagaaaggaagagaaagtcatct
cggtcatactccagtgaaagaagggctagggaaagggaaaaggaacgtcagaaaaaagga
ttacctcctatacggtcaaaaactctaagtgtttgcagtactactctttgggtaggtcaa
gtagacaagaaggctacacagcaggatttaaccaatttgtttgaagaatttggacaaata
gaatctattaatatgattcccccaagaggttgtgcttatgtttgcatggttcatagacaa
gatgcatatcgtgctcttcagaaacttagttctgggtcctataaaattggatccaaaatc
attaagattgcctgggctttaaataaaggtgtgaaaacagagtacaagcagttctgggat
gtggatctgggagtttcatatatcccttgggagaaagttaaattggatgatttggatggc
tttgctgaaggtggcatgattgaccaggagacagtaaatactgaatgggaaacagccaga
agctcagaagctgctaaagaaaacattcaaactacgcagagtactgcagttgataagagc
acagttattacaacgcagacagaagcttacacgcaaccagtcactatgctgcagattccg
gtagctccagctgtgcctgctgttagcttagttccacctgcgtttcctgtcacaatgtct
gtccctcctcctggttatagtgcaattcctcctccacccttcttgcgagcaagtttcaac
ccttcacagccacctccaggttttatgccccccccagtcccacctgttgtcccaccacct
gttgtcccaccacctgttgtcccaccggtagttccaacatctttagtacagcctccctta
ccaattgcacaagaggcgatgaaagatgttccttttactagccttgttctaccagttggc
acagttagtagcaatatagctactccaacgttatctgctggaagtgtttttaatcctctt
ccaagcaacaaaccagaatcagatgaaaaaggctcacatctgacagaccttcagatttct
tccagtgaaaacaacagatctgtgcaaaatgatgtctcgagtagctctggacttgttgga
ggagtgcagccacccagcgtttcaagcagttctgggcttaccggagaagggcagccaccc
agtgtctcaagtagctctggccttccaggggcagtacagccaccaagtgtctcaagcagc
tctggacttgtgggagcagtgcaaccaccaactgttacaagcagttctggtcttgcagga
ggagtgcagctacccagcatctccagtagctcttctcttacaggaggagttcagctgacc
agcgtctcgagtagctctggacttatggctggagtgcagccaccaaatgtctcaagtagc
tcagggcttttagctggagtgcatccacccagtgtctccagcagccctgggcttctgaca
ggaatgcagccacccattgtctcaagcagttcaggacttctggcaggagtgcagccaccc
agtgtctcgagcagctctgggcttctcataatgccaccacccaatgtttcaagtagttct
ggacttatgggagtgccaccaccaaatatttcaaatagttctggacttctggcaatgcag
catccagctggggttcaaaatatgcctcatttaagtattagcaatcaaagaatgccggga
atgcccattttagatatccgtccaggcctaatgccccattcacctggaccaaggtttcca
ttaatgcaacctggaataccaccgcagcgcagtattcctcccccagcaatccttgatccg
tctctccacccgccacctcgaggtccttttcccccaggagatatttttaatcaaacagaa
agaccttttggaacgccaggaagacaaaatattgatagcattgctaattcagagaaaaga
ctcccacttggcggcgataacattcaacaggaaggagacagagattatcgctttcctcca
gtagaaaatagagataatcttaacagaccatccccagtggatgtcagagattctgttgga
cgaccaccagttgatccaagagagggtataggaagacctccagtggatggaagagaacat
tttgctagatcacacgtagacatgagagagaattttggaagaccaggtatagataatctt
ggtcgaagggagcattttggtttcaattcagagaagcactggggacagagaggagattat
gatgaaagagagcaccatgccttccctatttatggtggccctaaaggcttccatgaagac
agagagaggtttcggcatgtaaactataggtttgacagtagaagtggtcccaattggaat
agaggatttgaacaagatgctcacagagattttgatgaccgcagaagaccctgggaaaga
cagagggatagggatgacagagattttaatttttgcagagaaattaacggaaacaggttt
ggaagagacagaatgtcaaacaactggatcccccctccacatccaagggtatttgaatat
tttgatggggccacttcgcaacgcaaagctgataatatgccccaggtaaatggtgaaaat
acagagacacaaagtcagccgccagctgcacaggtgcaggacgatccagaactttatgaa
aaactgacatcttccagcgagataaacaaagagaagagtgacacagaagctgatatagaa
agtgaaccagtggtagaaagcacagaaactgaggggacataa
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integrated database retrieval system
