Struthio camelus australis (South African ostrich): 104145828
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Entry
104145828 CDS
T08512
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104145828 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scam03000
]
104145828 (CNOT4)
03019 Messenger RNA biogenesis [BR:
scam03019
]
104145828 (CNOT4)
04121 Ubiquitin system [BR:
scam04121
]
104145828 (CNOT4)
Enzymes [BR:
scam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104145828 (CNOT4)
Transcription factors [BR:
scam03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104145828 (CNOT4)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104145828 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104145828 (CNOT4)
Ubiquitin system [BR:
scam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104145828 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
DZR_2
Nup35_RRM_2
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
104145828
NCBI-ProteinID:
XP_009675873
Ensembl:
ENSSCUG00000015392
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGTVDKNKNKVTALQRYDAPNSNNKDAWPSLQSSSKSANGLTMEH
RKTPPILENGTDPEHMTPDGADSDFGPIDKPSDSLSIGNGDSSQQITNSDTPSPPPGLSK
PNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSNDWPTAP
EPQSLFTSETIPVSSSTDWQAAFGFGSSKQQEDDLGFDPFDITRKALADLIEKELSVQDQ
PSLSPTSLQNPTPHTTAAKGPGSGFLHPAAPTNANSLSSTFPVMPQRFPQFQQHRAVYNS
FSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHSTGLGGIPISDNSSSV
ESLNMKEWQDGLRALLPNININFGGLPNASSPSNANHSVPTSNTATTDSLNWDSPGSWMD
PAIITGIPASTGNSLDTLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSNPFGTQIPLHR
ASWNPYSPPSNPTSFLSPPPGFQTAFRPPSKTPTDLLQSSALDRHFFWRKKKEKRKKTLE
MQEVSHPDSSPCPPTVPPHIFLSEESSS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagccctgatgctaaggaagaccctgtggaatgccccctttgcatggagcct
ctggagattgatgacatcaacttcttcccttgcacctgtggctaccaaatatgtcgtttc
tgttggcaccgtatccgcactgatgagaatggactgtgtcctgcttgcagaaagccatac
ccagaagatccagcagtgtacaaaccactctcccaggaagagctgcaaaggataaaaaat
gaaaagaaacagaaacaaaatgagaggaaacagaagatatcagagaaccgcaaacacttg
gccagtgtacgggttgtacagaagaaccttgtttttgtggtagggctatctcagcgccta
gcagatccagaggttttgaaacgaccagagtattttgggaagtttggtaaaatacacaaa
gttgtcattaacaacagcacatcatatgcaggctcacagggtccaagtgccagtgcatat
gtaacctacatccggtcagaagatgctctcagagccatacagtgcgtgaataacgtggtg
gtagacggcagaacacttaaggcatcattaggtacaacaaaatactgcagttattttcta
aagaatatgcagtgtccaaaaccagactgcatgtatctacacgagctgggagatgaagca
gccagtttcacaaaagaggaaatgcaggcgggtaagcaccaggaatatgaacagaaacta
ctgcaagaattatacaaactaaaccccaactttctccagttatctacgggtacagttgac
aagaacaagaacaaagtgacagcactgcagaggtatgatgcacccaacagtaataacaaa
gatgcctggccatcattacagagttcaagtaaatcagccaacggtttaacaatggaacac
aggaaaacgcctcctatattagaaaatggcacagacccagaacacatgactccagatggt
gcagactcagatttcggccctatcgacaaaccttcagattccctcagtataggaaatggt
gacagctctcagcagataacaaacagtgacacaccttcgccaccacctggtttatcaaaa
cccaatccagtcatacccatcagttcatctaatcacagtgcacggtccccttttgaaggg
gctgtaacagaatcacagtcgctcttctctgacaacttccggcaccccaaccccatccca
agtgggctccctccattccccagttctccacagacttccaatgactggcccacagcacca
gaaccacagagcctcttcacatcagaaactataccagtgtcctcctctacagactggcaa
gcggcttttgggtttggttcctccaaacaacaagaggacgacctagggtttgaccccttt
gacatcactcgcaaagccttagcagacctgattgagaaggaactgtcagtccaagaccaa
ccttccctctcgcccacatctcttcagaaccccaccccacacactacagctgccaaaggg
ccaggctctggattcctgcatcctgctgcacccacaaatgccaactctctcagtagcacc
tttccagtcatgccacagaggttcccgcagtttcaacagcaccgagcagtttacaactcc
ttcagttttccaggccaagcagctcgctatccttggatggccttcccacgcaatagcatc
atgcacttgaaccacacagcaaatcccacctcaaatagtaatttcttggacttgaatctc
ccgccacagcacagcacaggtctgggagggatccctatatcagacaacagcagttctgta
gagagtttaaatatgaaggaatggcaggacgggctaagggcacttctaccgaacattaac
atcaactttggtggactgcccaatgcttcttccccctccaacgccaaccacagtgtacca
acgtccaacactgccaccaccgacagcctgaattgggacagccctggcagctggatggac
cccgcaatcatcacaggtatcccagcctccacaggaaacagtttagacacccttcaagat
gacaatcctccacattggctaaaatctcttcaggccctcacagagatggacggccccagc
gcagcgccgtcacagacgcaccacagtaaccccttcggcacacagatcccgctgcacaga
gccagttggaatccctactctcctccttcaaaccccaccagcttcctctccccaccccca
ggctttcagacagccttcagaccccccagtaaaacccccacagatctactacagagctca
gcgctggatcgtcattttttctggaggaagaaaaaagaaaaaagaaaaaaaacgttagaa
atgcaggaagtgtcccaccctgactcctccccatgcccacctactgttccccctcatatc
tttctttctgaagaatccagttcctga
DBGET
integrated database retrieval system
