Struthio camelus australis (South African ostrich): 104146366
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Entry
104146366 CDS
T08512
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scam03036
]
104146366
Enzymes [BR:
scam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
104146366
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104146366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Helicase_C
DEAD
CS
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
104146366
NCBI-ProteinID:
XP_009676661
Ensembl:
ENSSCUG00000011970
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MMEVLILEIEDPGCFWVTVKGYGPYVVNEIEYKNLNAEMNQFYDKSCQDADEMKPLMLEE
GQVCVVFSKELKCWCRAVIKSIMSCTDHYLTECFLVDYAKYISVKSNDIRVAVEAFMQIP
YRAKQCGLYRTKPVTLHINFCEDTAKIVPAKRWDCAATQYFQNLLKATTQIKAQLCAIEG
DKFDVLLYVTIKNEKVCVNDDLVSKNFARFEEAKENTESPANDQESQTLNVESLPLKTVN
PALPFSPVLFQEKICINLETDHAVSTSFLFKKGLHSHQVSSTGLNGSTGSIVKAMPGLPF
KENTTLSLHAGRLLQFLNSDPLKTHFIKDEQQFQNFQNVSTKGDFVFLSNKIEPSSVLET
APLFDDLKKELIRKKFLGPNFTESYCWPPIARGCDVLAISPQGNDPLLYVPPVLTFLQSE
SCYKSLPSRSGPLALIVCPGWKKAQLTFELLKTYSRCSRPLHPMLIIVGQNREEARNVKI
HRGCEVIVTTPYSLLRLFEHHSLLFLRLCHLIFDEIEILFSEASEQVFTILEYYRKSIII
EERLYSPHQIVAVGTCWNRHIARLMKEFMNDPYLVITTVEEASIYGNVQQVVQLCLNSER
IAVLLRILDFTPNVQKMLIFTNSINEAEMVHQALKSNSVFSLKIHKESKFNFKTVLEHWT
KKYSSGTHVVLVLTDDCMQSLGITDATCVIHFSFPPSPRIFGQRLHNMSENFHNVLEKGS
FVDQEYTKARSVLLLTENDACHAPGVLHYLKRAEAEIPPELHDFTARALEAEEEKKLERP
LCIYLKTLGFCKNRRVCPDRHHINVQTDMSRNVPDKITPTPGCVTVVPLHIVNATNYFGR
IVDKQKDQYAILAEEINEYFKKPSNNVSVEKVEKLTLYGLYEETFFHRVQVLEISPKEEE
KLFFNVTIKYIDEGRMSQVESHRLLELPARFQCLPPQAVEFIVCSVKPIDNEIEWNPRVT
SHIYHKIKGKPHEAKMVLTLGNTIWVDPMVRVTRLSNLKTSVNEYNVRSEILSMGLGTDN
PEHIKQLQKLCRHVKVVSHEKKLETFIKEEAVSPENVSNLPNIQESTTESCRSSQMTLES
HPYDGVAEVKEAEDSTLHQHKCFYPEIKWFQNEETVTAKVKIASIVDYKCEFSKEKVVFS
ACSGDKLYLADMELHQHILAEKSACVIKDKEAIIVLTKEKRESWCKLLKNKNSHVSFDFE
HWEDFEDKGPFPVGVKKLHCTNVVTEELMDSSEDSGTESDD
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagtcttgatattagagattgaagatccaggttgcttttgggttactgtaaaa
ggatatgggccttatgtagtcaacgaaatagaatataaaaacctgaatgctgaaatgaat
caattttatgacaaatcttgtcaagatgcagatgaaatgaagccactaatgttagaagaa
ggccaggtttgtgtggtttttagcaaggaactgaaatgctggtgtagagcagttattaag
tcaattatgtcctgtacagatcattatctaacagaatgttttcttgtggattatgccaaa
tatatttccgttaaatcaaatgacattcgagttgcagtggaagcgtttatgcaaattcca
tatagagcaaaacaatgtggactgtatcgcacaaagccagtgactttgcatatcaacttt
tgtgaagatactgcaaaaatagtaccagccaaaagatgggattgtgctgctactcagtat
tttcaaaaccttctcaaagcaactacccaaataaaagcccaattatgtgctatagaaggt
gacaaatttgatgttctgctttatgtgacaataaaaaatgaaaaggtatgcgttaatgat
gatcttgtctcaaagaattttgctcgttttgaggaagctaaagagaatacagagagtcct
gcaaacgatcaagagagccagacgttaaatgttgagtctcttccactgaaaactgttaat
cctgcacttccttttagcccagtgctgtttcaggagaagatatgcataaatcttgaaaca
gatcatgctgtttccacctcttttcttttcaagaaaggactgcacagtcaccaagtgtca
agcacaggtctaaatggaagtactggatctattgttaaagcaatgccgggtttgcctttc
aaggaaaacacaactctttctcttcatgcaggcagactcctgcagttcttaaattctgat
cctctgaagacccactttattaaagatgaacagcagtttcagaattttcaaaatgttagt
acaaaaggagactttgtttttcttagcaacaaaattgaaccatcttcagttctggaaaca
gcaccactttttgatgatctgaaaaaggaacttattcggaaaaaatttttaggccctaac
ttcacagaatcttattgttggccaccaatagctcgaggatgtgatgtacttgccatctca
cctcagggaaatgatcctctcttatatgttccgccagttcttacgtttttgcagtcagaa
agttgctacaaatccttgccaagtaggagtgggccactagcattaatcgtatgtcctgga
tggaagaaggcacaacttacttttgaattattgaaaacatacagcagatgctccagaccg
cttcatccaatgttgataatagttgggcaaaacagagaagaagctagaaatgtgaaaatt
catcgaggatgtgaagttatcgtgactacaccgtacagcctcttgagactgtttgaacat
cacagtttgttatttctcagactttgccatcttatttttgatgagattgagatactgttc
tctgaagctagtgaacaggtttttactatattggagtattacaggaaaagtattattata
gaagaacggctatattcaccgcatcagattgttgctgttggaacttgttggaatagacat
atagcacgtttaatgaaggagttcatgaatgatccttaccttgtgataaccactgtggaa
gaagcttccatatatggaaatgtgcaacaggttgtgcagctttgcttaaacagtgagaga
attgctgtgttgctcagaatactggattttacacctaatgttcaaaagatgctgatattc
actaattcaataaatgaagcagaaatggttcatcaggcactgaagagcaattcagtattt
tccttgaaaatacataaagaaagcaagtttaatttcaaaactgttttagagcactggaca
aaaaaatatagttctggcactcatgttgtgttagtcttaacagatgactgcatgcagtct
ttgggaattacagatgcaacttgcgtaatacatttcagttttcctccttctccaagaatc
tttggtcagcgtctacacaacatgtctgagaacttccacaatgtgctagagaagggttct
tttgtcgatcaggaatatacaaaagcaaggtcagtcttactattaacagaaaacgatgcg
tgccatgctcctggggtcctgcactatttgaagcgtgctgaagctgaaattccaccagaa
ctgcatgattttactgccagggcgctagaagctgaagaagagaagaagcttgaaaggcca
ctgtgcatctatctcaaaacactcgggttttgcaaaaatagaagagtgtgtccagaccgt
catcacattaatgtacaaacagacatgtcccggaatgtgccagataaaattacaccaacg
cctgggtgtgtgacagtcgtgcctctgcatattgtaaatgcaacaaactactttggtcgc
atagtagataaacaaaaggaccaatatgcaattcttgctgaagaaattaatgagtatttt
aagaaacctagtaataacgtctctgtggaaaaggtggagaaactaacattgtatggatta
tacgaggaaacattttttcacagggttcaggtactagagatttccccaaaggaagaagaa
aaattattctttaatgttacaattaaatacatagatgaaggcagaatgagtcaagtagag
agccatcgactgcttgagttacctgcaagatttcagtgtctgccacctcaggctgtggaa
tttatagtttgtagcgtgaaacccattgataatgaaattgaatggaacccaagggttact
agtcatatttatcacaaaattaaaggaaaaccacatgaagcaaaaatggtgcttactttg
ggaaatacaatttgggttgacccaatggtccgagttaccaggctttcaaatttgaagaca
tctgtcaatgaatacaatgttcgatctgagattttgtctatggggctgggaacagacaat
ccggaacatataaaacaacttcagaagttgtgcagacatgtgaaggtggtatctcatgag
aagaagttggagactttcataaaggaggaagcagtcagtccagaaaatgtgtccaacttg
cccaatatacaggaaagcactactgaaagctgtagatcttcccaaatgactttggagagt
catccatacgatggtgtagctgaagttaaggaagcagaagactctacccttcatcagcat
aaatgcttttatccagaaataaaatggtttcaaaatgaagagactgttacagcgaaggta
aaaatagcaagtatagttgactataaatgcgaattctctaaagagaaggtggttttcagt
gcttgttcgggagacaaattgtatttggctgacatggagctgcatcagcatatacttgca
gaaaagtccgcgtgtgtgattaaggataaagaggcaattattgtcctcacaaaagagaag
agagaatcgtggtgcaagttactgaagaacaagaattctcatgtgtcttttgattttgaa
cattgggaagattttgaagataaaggcccatttccagttggtgttaaaaagttgcattgc
actaatgtagtaacagaagaattgatggactcttcagaagacagtggaacagaaagcgat
gattaa
DBGET
integrated database retrieval system
