Struthio camelus australis (South African ostrich): 104146758
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Entry
104146758 CDS
T08512
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104146758 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scam03041
]
104146758 (DDX5)
03009 Ribosome biogenesis [BR:
scam03009
]
104146758 (DDX5)
Enzymes [BR:
scam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104146758 (DDX5)
Spliceosome [BR:
scam03041
]
Complex A
U1 snRNP components
U1 related factors
104146758 (DDX5)
Complex B
104146758 (DDX5)
Ribosome biogenesis [BR:
scam03009
]
Eukaryotic type
Pre-60S particles
Helicases
104146758 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
P68HR
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
104146758
NCBI-ProteinID:
XP_009677266
Ensembl:
ENSSCUG00000011632
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MMYVRLMKLNCQVACLVVRIMIKLYMKESYSQVLYYGVFFSRFGAPRFGGSRGGPLSGKK
FGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTVQEVEQYRSSKEVTVRGHNCPKPI
INFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI
VHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRD
LERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR
QTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLM
EEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAP
ILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQV
NDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRDRYSAGKRGGFSSFRERENFERNYG
ALGKRDFGAKAQNGAFSAQSYSNGTPFGNGFAAAGMQAGFRAGNPAGAYQNGYDQQYGSN
IANMHNGMNQQQYAYPATGAAPMIGYPMPASYSQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgtgagacttatgaaactgaattgtcaagttgcatgtttggttgtaaggata
atgatcaagttgtatatgaaagagagttactctcaggttctgtattatggtgtattcttc
tctaggtttggagccccccgttttggaggaagtagaggtggacctctctctggaaagaaa
tttggaaaccctggggagaagcttacaaaaaagaaatggaatttagatgagctgcccaaa
tttgaaaagaacttctatcaagaacatcctgatgtagttagacgtactgtgcaagaggtt
gaacagtacagatcaagcaaagaagtcacagttaggggccataactgtccaaaaccaatt
ataaacttctatgaagctaactttcctgcaaatgttatggaagtgattcagaggcagaac
ttcactgaaccaactgctattcaagcacaaggatggcccgttgccttgagtggactggat
atggttggagtagcgcagactggatcagggaaaacactgtcttacttgttgcctgccatt
gtgcatataaatcatcaaccattcctagagcgaggagatggacctatatgtcttgtgctg
gcaccaactcgtgaactggctcaacaagtgcagcaggtagctgctgaatatagtagagcg
tgccgtttgaagtctacgtgtatttatggaggtgctccaaagggaccacaaattcgtgat
ttagaaagaggtgtggaaatctgcattgcaacacctgggagacttatagacttcttagaa
gctggaaagaccaatctcaggaggtgtacttaccttgtacttgatgaagctgaccgaatg
cttgacatgggatttgaaccacagatcagaaaaattgtagatcagatcagacctgacagg
cagactctgatgtggagtgcaacatggccaaaggaagtgagacagctggctgaagacttc
ttgaaagaatatgtacacatcaacattggagcattagaattgagtgcgaaccacaacatt
cttcagattgtggatgtgtgtcatgatgtagagaaagatgacaagcttatccgcttgatg
gaagaaataatgagtgagaaggaaaataaaacaattgtttttgtggaaaccaaaagacga
tgcgatgatcttaccaggaaaatgaggagagatgggtggccagcaatgggtatccatggt
gataaaagtcagcaggagcgggactgggttctaaatgaattcaaacatggaaaagcacca
atcctgattgctacagatgttgcatccagaggtctagatgtggaagatgtgaaatttgtc
atcaattatgactaccctaactcctcagaggactatatccaccgaattggacgaactgcc
cgcagtaccaaaacaggcacagcatacacattctttactcctaacaatattaagcaagta
aacgacctcatctctgtgcttcgggaggctaatcaagccatcaaccccaaattgcttcag
ttgattgaagacagaggttcaggtcgttcccgaggtgatcgacgtgacagatattctgcg
ggcaaaaggggtggatttagtagttttagagagagggagaactttgagagaaattatggt
gcactaggaaagagagacttcggagcaaaagctcaaaatggggccttcagtgcccaaagc
tacagtaacggaactccttttggaaatggttttgcagctgcaggcatgcaagctggcttc
agggctggtaaccctgcaggagcttaccagaatggttatgatcagcagtatggaagtaac
attgcaaatatgcacaatggcatgaaccaacagcagtatgcatatcctgccactggtgct
gctcctatgataggttacccaatgccagcaagttattctcaataa
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