Struthio camelus australis (South African ostrich): 104147382
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Entry
104147382 CDS
T08512
Symbol
DCP1B
Name
(RefSeq) LOW QUALITY PROTEIN: mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104147382 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104147382 (DCP1B)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104147382 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
104147382 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
GT-D
Motif
Other DBs
NCBI-GeneID:
104147382
NCBI-ProteinID:
XP_009678322
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MSLPSHYPGKVMEQVILEAIFKHMKDKKVTRNSQHGFIKGKPCLARLIAFYDEKTGSVDT
RRALGALDFSKAFDMVHNILVATLARRAVPCLKTEKTDVEGTLFVYARSASPRHGFTIMN
RLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAELMKKLYQHVQI
XIFRGTGVSPMIMNPTNNKEVDILRMLTKAKDEYTKCKTCSEPKQMTSSSAIYNNPNLIK
PIPVKPSENQHQRISQQGKNVDPEPQHLSLTALFGKQEKPDISEPHNKQHQENLPVRQGV
VRSLSYEEPSRHSPSAEKQLCPAIQKLMVRGTDLHPLAEFPENRLCENGNIHPVGETFTG
LFQPVASHGIATSHVVQDTAGTQSLLQKLQGQSGSVPKMDPSAXXXXXXXXXDXPAAVGA
PAAQMNSLTQPPLVYFNGSLPGQTLESQTVGKEPSKLPRQPLSLSGNQATNSGVISPQEL
LKKLQIVQQEQQLHVSSRPTLAAKFPVVTQNASTLKPLDSWIDKAPGAEKQSSLFQVISP
QRIPATVTPTLLMSPMVFTQSTPAPPKANESGRLAPAAQEPAASSASLLLPLQTPEPSVV
NSNSVTKMQLQETLLHLIQNDDNFLNIIYEAYLFSVRKAAMKKSM
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgccaagccactatcctgggaaggttatggagcaagtcattctggaagccatt
tttaagcatatgaaggacaagaaggtgactaggaacagccagcatggatttatcaaaggc
aaaccatgcctggccaggctgattgctttctatgatgagaagaccggctctgtggacaca
aggagagcactgggagcacttgactttagcaaggcctttgacatggtccataacattctt
gtagccacattggcaagaagagctgtcccctgtttgaaaacggagaagactgatgtggaa
ggaacactgtttgtttacgcaagatcggcttctccaaggcatggcttcacaattatgaac
aggctgagcatggaaaatcgaacagaaccaattactaaagacctcgatttccagctgcag
gacccttttctactttacagaaatgccagattgtccatatatgggatttggttttatgat
aaggaagaatgccaaagaattgcagagctcatgaaaaaattgtatcagcatgtgcaaatc
taaatttttagaggtacaggagtgtccccaatgatcatgaatcctactaataacaaagaa
gtggatatcttacggatgcttaccaaggccaaagatgagtataccaagtgtaagacctgc
tcagagccaaaacaaatgaccagttcctctgctatatataacaatcccaacctaatcaaa
ccaattccggtgaagcctagtgaaaaccagcatcaacgaatatctcagcaaggcaagaac
gtggatcctgaaccacaacacttgtctctgacagcactgtttggcaaacaagaaaagcca
gacatctcggaaccacataataaacagcatcaagagaatcttcctgttaggcagggggtg
gtacgttcattgtcttatgaagaacctagcagacattcaccctctgcagagaaacagctt
tgtccagcaattcagaagcttatggtgcgtggaacagaccttcatccacttgctgagttt
cctgagaaccgactatgtgaaaatggcaacatccaccctgtgggtgagactttcacagga
ctgttccaacctgtggcttctcatggcattgcaacatctcatgtagtccaggatactgct
ggcactcagagcttattacagaaattacagggtcagtcgggatcagtccctaaaatggac
cccagtgcagnnnnnnnnnnnnnnnnnnnnnnnnnngacnntcctgctgctgttggagca
ccagcagcacagatgaatagtctgacccagccacctttggtgtatttcaatggttccctg
ccaggccagactttggagtctcagacagttggtaaagaaccatccaaacttcctagacag
ccactttctctctctggcaatcaagcaaccaattctggggtgatttcacctcaagagtta
ctgaaaaaactccagatagtgcaacaagaacaacagttgcatgtatccagcagaccaacc
ttggcagctaagtttcctgttgttactcagaacgccagtacactgaaaccactggattcc
tggatagacaaggcaccaggtgcagaaaaacagagctctctctttcaggtaatctcacct
cagcgtattcctgccactgtgactcctaccttgttgatgtccccaatggtgttcactcag
tccacacctgctccaccaaaagcaaatgaaagtgggcggttagcaccagcagctcaagaa
cctgctgctagctccgctagccttctgctgccactgcaaaccccagagccatctgtggtc
aatagcaactcggtgacgaagatgcagctgcaggaaacacttttacacctgattcagaat
gatgacaacttcttaaatattatttatgaagcatatctcttcagtgtgagaaaggcggca
atgaaaaagtctatgtga
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