Struthio camelus australis (South African ostrich): 104147604
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Entry
104147604 CDS
T08512
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104147604 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scam03021
]
104147604 (CPSF3)
03019 Messenger RNA biogenesis [BR:
scam03019
]
104147604 (CPSF3)
Transcription machinery [BR:
scam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104147604 (CPSF3)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104147604 (CPSF3)
U7-dependent histone pre-mRNA processing factors
104147604 (CPSF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
104147604
NCBI-ProteinID:
XP_009678650
Ensembl:
ENSSCUG00000012059
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MFSSIHRVCAVLILMTLTSFCRGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPY
IDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSN
ISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLL
YTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGR
GLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRK
QININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIA
GYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVI
LVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKP
EQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLYYQLQKLTG
DVEEVEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKIQK
AAVHKISKKVDMDVYSKRMEIMLQDMFGEDCVSSKDGSVLCVTVDGKTANISLDTRTVEC
EPGSEDDESLREMVELAAQRLYDALSPVH
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttccatccatagggtgtgtgcggttttaattttgatgactttaacctctttt
tgcagaggtgctggccaagaagtaggaagatcatgcattattctggagtttaaaggaaga
aaaataatgcttgattgtggaatccaccctggactggaaggaatggatgctcttccttac
attgatttgatagatcctgctgagattgatctcctcctaatcagtcatttccatttagat
cattgtggggctttaccatggtttttgcagaaaacgagttttaaaggaagaacattcatg
acgcatgccacaaaagctatttacagatggcttctttcagactatgtcaaagtcagtaat
atatcagcggatgacatgctatatacagaaacagacctggaagaaagcatggacaagatt
gaaactatcaacttccatgaagtgaaagaggtggcaggaatcaaattttggtgttaccat
gcaggccatgtcctgggagctgccatgtttatgattgaaatcgctggcgtgaagctttta
tatacaggtgatttctcaagacaggaagacaggcatctgatggcagctgagattcccaat
attaaacctgatattcttataattgaatccacctatggtactcacattcatgaaaaaaga
gaagagcgagaggcaagattctgtaataccgtgcatgacattgtaaatagaggaggtaga
ggtcttattcctgtgtttgccctaggccgagctcaagaactacttttgattttagatgaa
tactggcagaatcatcctgaactccatgatattcctatatactacgcctcctctttggca
aagaaatgcatggcagtttatcagacatacgtcaatgccatgaatgacaaaatccgcaag
caaataaatatcaacaatccgttcgttttcaagcacattagtaatctgaagagtatggat
cactttgatgatattggcccaagtgttgtaatggcttccccaggtatgatgcagagcggc
ttatctagagagttgtttgagagctggtgcacagacaagagaaacggagtaattatcgca
gggtactgtgttgaaggaacgcttgctaagcacatcatgtctgaacctgaagagatcacg
actatgtcagggcaaaaactcccactgaagatgtctgtagactacatttctttctctgct
cacacagattatcaacaaactagtgagtttatccgggccctgaaacctccacatgtgatt
ttagtacatggagagcagaatgaaatggccagattgaaagcagcattgatacgagaatat
gaggataatgatgaagttcatatagaagttcataatcctaggaatactgaagctgtgaca
ttgaacttcagaggagaaaaacttgctaaggtgatgggatctttagcagataagaagcca
gagcaaggacagagaatttctgggatcctggttaaaagaaattttaactatcatatcctt
tctccttgtgacctctccaattacacagacttggcgatgagcactgtaacacagacacaa
gccattccgtatactggcccattcaatctgctttattatcagctccaaaaactcactggt
gatgtagaagaagtagaaatccaacagaaaccagccttgaaagttttcaaaaatattaca
gtgatccaggagccaggcatggtagtgcttgagtgggtggcaaatcctgctaatgatatg
tatgcagacaccgtgacaacagtgatactggaagttcaatcaaatcccaaaatacaaaaa
gctgcagtacataaaatttccaaaaaagtagatatggatgtgtatagcaagaggatggag
atcatgcttcaggacatgtttggggaggactgcgtaagttcaaaagatggctctgttcta
tgtgtcacagtagatggaaagactgcaaacatttcactggacactcggactgttgagtgc
gagccaggaagtgaagatgatgaatcccttcgagaaatggtggaactggctgcacagagg
ctctatgatgccctcagcccggtacactga
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integrated database retrieval system
