KEGG   Struthio camelus australis (South African ostrich): 104147707
Entry
104147707         CDS       T08512                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
scam  Struthio camelus australis (South African ostrich)
Pathway
scam03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:scam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104147707 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scam03021]
    104147707 (TAF5L)
   03036 Chromosome and associated proteins [BR:scam03036]
    104147707 (TAF5L)
Transcription machinery [BR:scam03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     104147707 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     104147707 (TAF5L)
Chromosome and associated proteins [BR:scam03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     104147707 (TAF5L)
    STAGA complex
     104147707 (TAF5L)
    TFTC complex
     104147707 (TAF5L)
    SAGA complex
     104147707 (TAF5L)
    SLIK complex
     104147707 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_Aladin DSE1_N ANAPC4_WD40 WDR90_beta-prop_4th CFAP251_N Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 PAC11 Beta-prop_NOL10_N Tricorn_2nd Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_DCAF4 ASA1 Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_RFWD3 PEP5_VPS11_N PROPPIN WD_LRWD1 Ge1_WD40 eIF2A PD40 Nbas_N
Other DBs
NCBI-GeneID: 104147707
NCBI-ProteinID: XP_009678807
Ensembl: ENSSCUG00000000356
UniProt: A0A093GW99
LinkDB
Position
Unknown
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSDVPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDILDDEEEEDDNAGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NSYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgcgtacgcacagaacagattcagatggcagtgtcctgctacctcaaacgccgt
cagtatgtggactcagaaggtcccttaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagtccagtctgaatctggttgtgccaacgttgtgtctgca
gctccttgcctggcagagccacagcaatatgaagtacaatttggacgattacgcaatttt
ctcacagattcagattctcagcacagccatgaagtgatgcctcttctgtatcccctcttt
gtctacctccatctgaacatggtccagaatggcctgaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaatgccagccagaaggatatcattgagcagttg
cagactaccatgactattcaagatatcctgtccaacttgaagctccgagcttttctggac
aacaaatatgtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaatgccctgtgcaaagtcctgaccttgcacattcacctggatgtgcag
cctgccaagaggaccgactaccagctctatgccggtgggagctcctcgcgcaacgaaagc
aacggcctggaacccagcgacgtgccggcttctattctacagaacgaggcagccctggat
ttactgcaggacagcattaaacgtgtcaaggacgggcccccttccttaacgaccatctgt
ttctatgccttctataacacggagcagttgctgaacactgcagagatctcaccgaacagc
aagctgcttgctgctgggtttgataattcatgtgttaagctgtggagcctgcgttccagg
aagttaaaatctgagccccatcttgttgatgtgtcccgcatccgcctggcttgtgacatc
ctggatgacgaggaggaagaggatgacaacgcaggcacagaaatgaagatcctgagagga
cactgtggacctgtgtatagcacgaggttcctttcagacagttcaggactcttatcttgt
tctgaggacatgtccatcagatattgggacctcggaagttttaccaacactgtgttgtac
caaggacatgcctatcctgtctgggatttggatattagtccctgcagcctgtactttgcc
agtggttcccatgatcgcacagcaagactctggtcatttgatcggacgtacccactgcga
atatatgcaggccatttggcggacgtggactgtgtcaagttccaccccaattccaactac
ttagcaacaggctccacagacaaaactgtgcgcttatggagcactcagcagggcaactcg
gtacgtctttttacaggtcaccgcggccctgtgctagcactcgcgttttctcccaatggt
aagtacctggcatcagcaggtgaagaccagcggctaaagctgtgggacttggcttcagga
actctttacaaagaactgagggggcacacggacaatataaccagccttacttttagcccc
gacagtagtttgattgcttcagcgtcaatggataattctgtccgggtgtgggacattcgg
aacagttactgcaacgcccctgcggacgggtcttccagtgaactggttggtgtatatacc
ggacagatgaataatgtactgagcgtacaatttatggcctgtaatctacttctagtgact
ggaattgcacaagaaaatcaggaacattaa

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