Struthio camelus australis (South African ostrich): 104147732
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Entry
104147732 CDS
T08512
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104147732 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scam01009
]
104147732 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scam04515
]
104147732 (PCDH9)
Protein phosphatases and associated proteins [BR:
scam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104147732 (PCDH9)
Cell adhesion molecules [BR:
scam04515
]
Cadherins
Protocadherins
104147732 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
MAP17
Big_9
RCR
EphA2_TM
DUF7420
V_ATPase_I
DUF6249
7tm_3
Motif
Other DBs
NCBI-GeneID:
104147732
NCBI-ProteinID:
XP_009678850
Ensembl:
ENSSCUG00000012521
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQIEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPFSGVIKSNVSFDREQQSSYTFDVKAIDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDGSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVASTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFHLPDGSQESC
SDSGLGDHEPVGGGTLISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLA
EATEMCTQECLVLGHSDNCWMPPSLGPYQQPKSPLSTFAPQKEWVKKEKLVNGHTLTRTW
KEDSNRNQFSDRKQYGSSEGHFNTGNHMTDIPLANLKSYKQASGAVESPKEHQL
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaatgtacccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacggggaccagtgcc
agccttgtctacagactggtgtctaaagcgggagatgcccctctggtcaaagtgtccagt
accactggggagatctttacgacgtctaacagaatagacagagaaaaactctgtgctgga
gcttcctatgcagaagaaaatgagtgtttctttgaacttgaggtggtgattctccccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaggatactaatgacaacgcacct
atgtttccatcccctgtcatcaatatctccataccagaaaacactctgatcaacagtcgt
tttccaatcccatcagccacagatcctgacacaggtttcaacggcgtgcagcactacgag
ttgttaaatggacagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcaactgattgtgcagcagaacttggatagagagcaaaaggacacctatgtgatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagctatcctgcaagtc
acagtaagtgatgtcaatgataataggccagtttttaaagagagtcaaatagaggttcac
atacccgagaatgcccctgtaggcacttctgtaattcagcttcatgctacagatgcagat
ataggaagcaacgcagaaatcagatatatttttggtgcccaagttgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagtgcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctactccagct
cgggcaactgttaccatcaatgtcactgatgtaaatgataaccctcctaatatagacctc
aggtacataataagtcccatcaatggtacagtgtacttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtcccctttcacttgaaggcagtttatgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctgggaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgtcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagagaagaacaagaacgtttcattttc
actgttacagcgagagacaatggtacccctcctttgcagagtcaagcagctgtaattgtt
actgtgttggatgaaaatgacaacagtcccaaatttactcataatcactttcaatttttt
gtatcggagaacttaccaaagtatagcactgtaggggtgataacggtaactgatgcagat
gccggggaaaataaagcggtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatcctttctctggagttataaagtccaatgtttcttttgatcgagaacagcagagctcc
tacacctttgatgttaaagcaattgatggaggacaaccacctcgctcttctacagcaaaa
gtaaccataaatgtcatggatgttaatgataacagccccgttgtcatctacccaccttcc
aatacttcttttaagctagtgccactttcagcaattccaggttcggtagtagcagaagta
tttgctgtggatatagacactggaatgaacgctgaacttaagtatacgatcgtaagcgga
aataacaaaggtttgtttcgtattgacccagtgacaggtaatatcactctggaagaaaaa
ccaactcctaatgatgtggggctgcatcgtttagtggtcaacataagtgatctgggttat
cccaaatccttgcatactcttgtgcttgtatttttgtatgtaaatgatactgctggaaat
gcctcttacatttatgacttgatacgcaggactatggaaacacctttggaccggaacata
ggggacggtagccagccctaccaaaatgaggactatctcacgatcatgattgctattgtg
gcaggtgctatggttgtcatagtggtgatatttgtcacagttctcgtgcgctgtcgacat
gcatccagattcaaagcagcccaaaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccgaagagttct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgctgttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgactgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccacagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccatgtgattcaggaactcccgttggacaacacctttgttgcttccactagttcagat
cacttcagtgcctcagagtgcagttcccaaggaggcttcaagacaaagggccccttacac
accagacagtcccagcgccgtgttacatttcacctccccgatggctcccaggaaagctgc
agtgacagtggtctgggagaccacgagccggtgggtggtggaaccctgatctcacaccct
ctccctctggttcagccgcaggacgaattctatgaccaggcgtcaccggacaagaggact
gaagctgatggcaactctgaccccaactccgatgggcctcttgggccaagaggattagct
gaagctacagagatgtgtactcaagaatgcctggttttgggtcactcagataactgttgg
atgcctcccagcttgggtccataccaacagccaaagtctcctctctccacctttgcacct
cagaaagaatgggttaagaaggaaaaactagttaatggacacacattgacaagaacctgg
aaagaagatagcaacagaaaccagttcagtgaccgaaagcagtatggttccagtgagggc
catttcaacactggcaatcacatgactgacattcctttggccaacttgaagtcttataaa
caggcctcaggagctgttgagagtccaaaggagcaccagctataa
DBGET
integrated database retrieval system
