Struthio camelus australis (South African ostrich): 104147853
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Entry
104147853 CDS
T08512
Symbol
VPRBP
Name
(RefSeq) protein VPRBP isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
scam01001
]
104147853 (VPRBP)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scam04121
]
104147853 (VPRBP)
Enzymes [BR:
scam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104147853 (VPRBP)
Protein kinases [BR:
scam01001
]
Serine/threonine kinases: Other
Other
104147853 (VPRBP)
Ubiquitin system [BR:
scam04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104147853 (VPRBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
LisH
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
104147853
NCBI-ProteinID:
XP_009679039
Ensembl:
ENSSCUG00000010203
LinkDB
All DBs
Position
Unknown
AA seq
1511 aa
AA seq
DB search
MTSGSGHVDSKAELTALLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVAGDMEISFHL
DSSHKTSSRVNSATKLDDGGLRKNKSGKQHERDSFRKAKQKLGFSASEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSAFTPVAAAASPVALPRTP
RIANGISARLSSHTSVGSTATSVHAQARPSASQGPLALPGPSYTSNSPLIGRISFVRERP
SPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDSKCMPNLMTGGDPV
ICVKSWQTCSI
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctgggcatgtggactccaaggctgagctcactgctttgcttgagcag
tgggagaaagaacatggcagtgggcaagacatggtccccattctcactagaatgtctgag
ctgattgagaaggagactgaagagtaccgcaaaggagatccagacccgtttgatgaccga
catccaggtcgagcagacccagagtgcatgcttggtcacttgctaaggatacttttcaag
aatgatgatttcatgaatgcgctagtgaatgcttatgtgatgacaagcagagagcctcca
ctaaacactgctgcctgccgacttcttctggacatcatgccgggactggaaactgctgtt
gtctttcaggaaaaggaaggcatagttgaaaatctctttaagtgggctcgagaggctgac
cagccgttgaggacatacgcaacagggctgttaggaggagctatggaaaaccaagatatt
gctgcaaattacagggatgagaactcacagttggtggctttggtgcttcggcgactgcga
gagttacaggttaccgaaatgactacgaaacaagaaaacaagcgtcccagtcctcggaaa
gtgccatcagatcctttgctgcctctggatgaagaggctgtggatatggattatggagag
atggcagtagatggagagcaagaggaagttgctggggatatggagatctcctttcatctt
gattcaagtcataagaccagtagcagagtaaactctgccacaaagctagatgatggggga
ctgagaaaaaacaaatcagggaaacaacacgaaagagacagcttccggaaggccaagcaa
aagctgggcttctccgcttcagaaccagagcggatgtttgttgaactgtccaacagcagc
tggtcagaaatgtccccatgggtgattggcactaattatacactttaccctttgactcct
gccatagagcagaggcttattcttcagtacctgactcccttaggggagtaccaagagctg
ctgcccatctttatgcaacttggatcaagagaattgatgatgtactacattgatttgaag
cgaaccaatgacgtgctgcttacttttgaagcccttaagcatttggcatcgttgctgctg
cacaacaagtttgcgacggagtttgttgctcatggaggagtgcaaaaattgctagagatc
ccacgtccttctatggcagccacaggggtctccatgtgcttatattatttgtcttacaat
caagatgccatggagagggtatgcatgcatccccataacgtgctctcagatgtagtgaac
tacaccctatggctgatggagtgctctcatgcctcaggctgctgccatgctaccatgttc
ttctccatttgcttctccttccgtgctgtcctggaactttttgacaggcatgatggcctt
cgtcgtctggttaacctgataagcactcttgagatcttaaacctggaagaccaaggagcc
ctcctgagtgacgacgagatctttgccagtcgccagactgggaaacacacctgcatggcc
ttgcgaaggtactttgaggctcaccttgccatcaaacttgaacaggtgaagcagtcactt
cagcgcactgagggtggcattctcgtccatccacagcctccctacaaggcctgttcctac
actcatgagcagattgtagagatgatggagttcctcattgagtatggtccagcacagctc
tactgggagcctgcagaggtctttctcaagttgtcttgtgtgcaactcatgcttcagctt
atttcaatagcatgcaactggaagacgtactatgcaaggaatgacacagtaagatatgct
ttggatgtactagctatcttgactgtggttcctaaaatccagttgcagctggcagaacct
gtggatgtattagatgaagctggatctactgtttccactgtcggtattagcatcatcctt
ggagttgctgagggtgaatttttcatccatgatgcagagattcagaaatcagcccttcag
atcatcatcaactgtgtatgtggcccagataatcggatctccagtattggcaaattcatc
tctggaactcctcggcgaaagcttcctcaggcccccaagagcagtgaacacacgctagcc
aagatgtggaatgtggtacagtccaacaatggcatcaaagtgctgctgtcattgctgtcc
ataaaaatgccaatcacagatgcagatcagatccgagcattagcctgcaaagccttggtg
gggctctcacggagcagtactgtccggcagatcatcagcaagctccccctcttcagcagc
tgtcaaattcagcagctgatgaaggagcctgtgcttcaggacaagcgcagcgagcacgtc
aagttctgcaaatacgctgctgagctgatagagcgtgtctcagggaagccactgctgatc
ggcacagatgtttccttggctcgattgcagaaagcagatgtggtggcccagtcaaggatc
acgtttcctgagaaggagctgctgctcctgattcgaaaccatctcatctctaagggcctg
ggagaaactgcatctgtccttactaaagaggctgacctacccatgactgcagcgtctcat
tcgtctgccttcacccctgttgcagctgctgcctctcctgtggccctgcctcgcactcct
cgtatagctaatggcatttcagcccgtttgagtagccacacttctgtaggttctactgcc
acctctgtccatgctcaggcaaggccatctgcctcccaaggtcctcttgctcttccaggc
ccttcttacaccagcaactctcctctgattggcaggattagctttgtcagggagaggccg
tctccctgcaatggcagaaaaatcagagtgttgcgacaaaaatcggaccatggtgcctac
agccagagcccagctatcaaaaagcagctggacagacaccttccttccccacccacactg
gacagtataatcacagagtaccttagggagcagcatgcccgctgcaagaaccctgttgcc
acctgtccccctttctctctctttactccccaccagtgtcctgagccaaaacagaggcgc
caagcgccaactaactttacctcacggctgacccgcagggcagcctttccgaagtacgga
ggggtggatggtggctgctttgatagacaccttatatttagcaggtttcgtccaatttct
gtgttccgggaagcaaatgaggatgaaagtggctttacttgctgtgcgttttctgcacgg
gaacgatttttaatgctgggtacttgcacagggcagctgaaactctacaatgtattcagt
ggacaggaagaggccagttacaactgccataactctgccatcacgcaccttgagccatcc
agagatggatctttattgctgacgtctgctacgtggagccaacctttgtctgcattgtgg
ggaatgaaatctgtctttgatatgaagcattccttccctgatgaccactatgtggagttc
agcaagcactctcaggatagggtcattggcacaaaaggagacattgcccatatctatgat
attcagactggcaacaagctattgactctgtttaacccagatcttgccaacaactacaag
aagaattgtgccacctttaaccccactgatgaccttgtcctaaatgatggtgtcctctgg
gatgtcagatcagcacaagccatccacaagtttgacaaattcaacatgaccatcagtggt
gttttccatcccaatgggctagaggtcatagtcaacacagaaatttgggacctccgaact
tttcatttgctacacacggtacctgcactggatcagtgtcgtgtggtcttcaactacact
ggcacagttatgtatggagctatgttgcaggcagatgatgaagatgaccttctggaggag
agaatgagaagtccctttggctcttctttcaggacattcaatgcaactgattataaacct
atagctaccatagatgtcaaacggaatatctttgacttgtgcacggacagcaaggactgc
tatctggctgttattgagaatcaagggagcatggatgccatgaacatggatacggtttgc
agactgtatgaagtgggcaggcagcgtttggcagaagatgaagaggatgaagaagaagat
caggaggaagaggagcaagaggaagaagatgatgatgaagatgatgatgatacagatgac
cttgatgagctagatacagaccagctgctggaagctgaattggaggaggatgagaacaat
gagaacgctggtgaggatggagaaaatgatttttctccctctgatgatgaggagcttgcc
aacctcctagaagagggagatgagggcgaagatgaagattctgatgctgatgaggaagtc
gagctgattcttggagacagtaagtgtatgcccaacttgatgactggaggtgaccctgtt
atctgtgtaaagtcctggcaaacgtgcagcatctaa
DBGET
integrated database retrieval system
