Struthio camelus australis (South African ostrich): 104148049
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Entry
104148049 CDS
T08512
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03082
ATP-dependent chromatin remodeling
scam03083
Polycomb repressive complex
scam04110
Cell cycle
scam04330
Notch signaling pathway
scam04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104148049 (HDAC1)
03083 Polycomb repressive complex
104148049 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104148049 (HDAC1)
04350 TGF-beta signaling pathway
104148049 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104148049 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scam03036
]
104148049 (HDAC1)
Enzymes [BR:
scam01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104148049 (HDAC1)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
104148049 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
104148049 (HDAC1)
BRAF-HDAC complex
104148049 (HDAC1)
REST complex
104148049 (HDAC1)
SHIP complex
104148049 (HDAC1)
MiDAC complex
104148049 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
104148049 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
104148049 (HDAC1)
Chromatin remodeling factors
NuRD complex
104148049 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
104148049
NCBI-ProteinID:
XP_009679321
Ensembl:
ENSSCUG00000012545
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGD
RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAV
QEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSEDEGEGGRKNVANFKKAKRVKTEEEK
EEEEKKDEKEEEKAKEEKAEPKGVKEETKSA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccccacaggatccggatgacccacaacctactgctgaactatggcctctacagg
aagatggagatttatcgtcctcacaaggcaaacgcagaagaaatgaccaagtaccacagt
gatgactacattaaatttttgagatctattcggccagataacatgtctgagtacagcaag
cagatgcaaagattcaatgttggggaagactgccctgtatttgatgggttgtttgaattt
tgtcagctctctgctggaggctcagttgccagtgctgtgaagctaaacaagcaacagacg
gatattgctgtgaattgggcaggaggccttcaccacgctaagaagtcggaggcttctggc
ttttgttatgtcaacgacattgttttggctatcttggagctcctaaagtatcatcagaga
gtgctgtatattgacattgatattcaccatggagatggcgtggaggaagccttttatacc
acagaccgtgtcatgaccgtgtcctttcataagtacggagaatacttcccaggaacagga
gacctgagggatattggtgcaggcaaaggcaagtattatgctgtcaactatcccctccgg
gacggaattgatgatgagtcgtatgaggcaatattcaagccggtgatatctaaagtgatg
gagacgttccagcctagtgcagttgtcttgcagtgtggatcggattctctgtcaggggac
aggctgggttgttttaatctaaccatcaaaggtcatgccaagtgtgtggagtttgtaaaa
agttttaatttgcctatgctgatgctgggaggaggtggctatacaatccgcaatgtagcg
agatgctggacctacgaaactgctgtggctttggacactgaaattccaaacgagcttcca
tataacgactattttgagtactttgggccagactttaaactccacatcagtccctcaaac
atgaccaaccagaatacaaatgagtatctcgagaagatcaagcaacgtctctttgagaat
ttgcgcatgctgcctcatgctcctggcgtccagatgcagccaattcctgaggatgctgtt
caggaagacagtggagatgaagaggaagaagatcctgagaaacgcatttcaattcgcaat
tctgataagagaatatcctgtgacgaagaattctctgactctgaagacgaaggagaagga
gggcgcaaaaatgttgccaactttaagaaagctaagcgggtgaaaacagaagaggaaaag
gaggaagaggagaagaaagatgagaaagaagaggaaaaagcaaaagaggagaaagcagaa
cccaaaggggtgaaggaagagactaaatctgcctaa
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