Struthio camelus australis (South African ostrich): 104148457
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Entry
104148457 CDS
T08512
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104148457 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scam03041
]
104148457 (SF3B1)
03036 Chromosome and associated proteins [BR:
scam03036
]
104148457 (SF3B1)
Spliceosome [BR:
scam03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104148457 (SF3B1)
Complex B
104148457 (SF3B1)
Complex C
U2 SnRNP specific factors
104148457 (SF3B1)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104148457 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
104148457
NCBI-ProteinID:
XP_009679956
Ensembl:
ENSSCUG00000001181
LinkDB
All DBs
Position
Unknown
AA seq
1297 aa
AA seq
DB search
MATRVDIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELE
DDDDDYSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKKHRRM
MIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVN
GASSQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPG
ATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNRWDETPKTERDTPGHG
SGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTPAMNM
ATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVPIRTP
ARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVDESTL
SPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQ
ERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLA
TMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKI
VQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIESFDSV
LKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKI
VLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAA
EIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQTTED
SVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMKTCQE
EKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNR
HEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKA
IGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGV
LKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDS
LNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWK
IYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggctactagagtggatatcgaagcacaaattcgagaaattcaaggaaaaaagcctgct
cttgatgaagcacaaggagtaggccttgattccacaggatattatgatcaagaaatttat
ggtggcagcgacagcagatttgctggatatgtaacttctattgcagcaactgaattagaa
gatgatgatgatgactattcttctacaagtttgcttggccagaagaagccagggtaccat
gctccagtggcattgcttaatgacataccacagtcaactgaacagtatgatccctttgca
gaacaccgtcctcaaaagattgcagatcgggaagatgaatacaaaaagcacaggcggatg
atgataatttcccctgagcgtcttgatccttttgcagatggagggaagacaccagatcct
aaaatgaatgccagaacatatatggatgttatgcgtgaacagcatttaacaaaagaagag
agggaaattaggcaacagctagcagaaaaagctaaagctggagagcttaaagtcgtcaat
ggagcctcatctcagccaccttcaaaacgcaagcggcgttgggatcagacagctgatcag
actcctggtgctacacctaaaaaactatccagttgggatcaagcagagactcctgggcat
actccatctctgcgatgggatgaaactccaggccgtgccaagggcagtgaaactcctggt
gccaccccaggctcaaaaatatgggatcctactcccagtcatacaccagcaggagctgca
acacctggacgggacacacctggtcatgccacaccaggccatggaggtgccacatccagt
gctcgcaaaaatcgatgggatgaaacacctaaaacagaaagagatactccgggacatggc
agcggatgggctgagactcctcgtacagatcgtggtggtgattcaattggtgagacacca
accccaggagcaagtaaaagaaagtcacgatgggatgaaacgcctgcaagccagatgggt
ggcagcactcctgttctgacacctgggaaaacacccattggtaccccggctatgaacatg
gcaactcctacgccaggtcatataatgagcatgactcctgaacagctgcaggcttggcgt
tgggagagggaaatagatgagagaaacagaccactttctgatgaagaattggatgccatg
ttcccagaaggatataaggttcttcccccaccagctggttatgtacctattcgcactcca
gctcgcaaacttacagcaactccaacacctttgggtggcatgactggattccacatgcag
acagaagacaggactatgaagagtgtcaatgatcagccctctggaaaccttccattccta
aaaccagatgacatccagtattttgataaactgctggttgatgttgatgaatcaacgctg
agtcccgaagaacagaaggagagaaaaataatgaagttacttttgaaaataaagaatggc
acacctcccatgagaaaggctgcgttgcgacaaattaccgataaagctcgggaatttgga
gcagggccattgtttaatcagattctacctctgctgatgtcaccgacgcttgaagatcaa
gaacgtcacttgcttgtcaaagtcattgacagaattctctacaaattggatgacttggtc
cgaccatatgtacacaagatcctcgtcgtcattgaaccactgctgattgatgaagactac
tatgccagagtggaaggcagagaaattatttcaaacttggcaaaggctgctggtttggca
acaatgatctccacgatgcgacctgatattgataatatggatgaatatgtccgaaatacc
acagctcgagcctttgctgttgttgcctctgctttgggcattccttctctgttacccttc
ttgaaagctgtctgtaaaagcaaaaaatcctggcaggctaggcataccggcatcaagatt
gtacagcaaattgctattcttatgggttgtgctatcttgcctcatctcaggagcctggtt
gagattattgaacatggtctggtggatgagcagcagaaagttcgtaccatcagtgctttg
gctattgctgctttggctgaagcagctacaccctatggtattgagtcatttgattctgtt
ctaaagcctttatggaagggtatacgtcaacacagaggaaagggtttggctgcctttttg
aaggctattggttatctgattccattgatggatgctgagtatgcaaactattacaccaga
gaagtcatgctaatccttatcagagagttccagtctcctgatgaagagatgaaaaaaatt
gtattgaaggtggtaaagcagtgttgtggtacagatggtgttgaagcaaactacattaaa
acagagatcttgccaccgtttttcaaacacttttggcagcacagaatggcattggacaga
agaaactacagacagttggttgatacaacggtggagctggcaaataaagttggagcagca
gaaattatttctagaattgtggatgatctgaaggatgaggctgagcagtacagaaaaatg
gtcatggaaacaattgagaagataatgggaaatctgggggcagcagacattgatcataaa
ctggaagaacagcttattgatggtatcttgtatgccttccaggaacagaccacagaggat
tctgtgatgctgaatggctttggcacagtggtcaatgctctaggcaaaagagttaaaccc
tatttgccacaaatctgtggtacagttctgtggcgtttgaacaacaagtcagctaaagtt
aggcagcaggccgctgacctgatctcccgtactgccgttgtcatgaagacttgtcaagag
gaaaaactgatgggacacttgggtgttgtgttgtatgagtacctgggtgaagaatatcct
gaagtactgggcagcatacttggagcacttaaggctattgtgaacgtgataggtatgcac
aagatgacaccaccaatcaaagacctgctgccacggcttacacctattttgaagaacaga
catgagaaagtacaggagaattgtattgatcttgttgggcgtattgccgacaggggtgca
gaatatgtttctgctagagaatggatgaggatctgctttgaactgcttgaattattaaaa
gctcataagaaagctatccgaagagccacagtaaacacttttggttatattgcaaaagct
attggacctcatgatgtgctggctacactgctaaataacttgaaagtacaggaaagacag
aacagagtatgtactacagtggcaattgctattgtagctgaaacatgctcacctttcaca
gtgctgcctgcactcatgaatgaatacagagttccagagctgaatgtccagaatggtgtg
ttaaaatctctttctttcttgtttgaatacattggagagatgggaaaagattacatttat
gctgttacaccattgcttgaggatgctttaatggacagagatcttgtacacagacaaaca
gcaagtgctgtggtgcagcatatgtctcttggtgtttatggatttggctgtgaagattct
cttaatcatttgttaaattatgtatggcctaacgtgtttgaaacctctcctcacgtcatt
caggcagttatgggggctctggagggcctccgagttgctatcggtccctgcagaatgttg
cagtattgtttacagggtttgtttcaccctgcccgcaaagtcagagatgtttattggaag
atttataattcaatctatattggctcccaggacgctctgatagcacattatccgagaatc
tataatgatgaaaagaacacctacattcgttacgaacttgactacatcttataa
DBGET
integrated database retrieval system
