Struthio camelus australis (South African ostrich): 104148607
Help
Entry
104148607 CDS
T08512
Symbol
ALMS1
Name
(RefSeq) Alstrom syndrome protein 1 isoform X1
KO
K16741
alstrom syndrome protein 1
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scam03036
]
104148607 (ALMS1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
scam03037
]
104148607 (ALMS1)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
104148607 (ALMS1)
Cilium and associated proteins [BR:
scam03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104148607 (ALMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
104148607
NCBI-ProteinID:
XP_009680139
Ensembl:
ENSSCUG00000017703
LinkDB
All DBs
Position
Unknown
AA seq
2781 aa
AA seq
DB search
MESWYQLPAELDVSRLTAVSETKLGLTCDRNDLTESPTMEEGVLPSAEASTRQCPGETHG
LLLNIQDSRFSPCLPLLMTYSTQGQKILGDTLFQQSEGDFISLRGIPDVSSASEVHSKPL
QIHEAVWLTDTEIPSDALSDCLTLSQHPLPFGNVDPCDVSFSGYLSQQAFAGQLLLDKET
NDYKSDISEKALLSQTGESLARLTSDKMLTEASRLKQIEASPAKQTYSTSVKDERFSWDN
NVPAPTLELSEKEEKLLSHDEFSSSSENSCKTALTRNSEKCEKEMQMEKVKMAESESEGL
IREMEKLEKERKVPELGFSSTLPDDLRKDNCKKADTRDVFSAENSEIARLSKEHGADLND
SGSLKLKELQAAVLAHHKQPSSAMRFEKEEFVPTVTATSDCAPKQLVTTSMKAVSPCSEK
ESARVEVEPGVSRTELTISDFSIERGHKVTDISPSFNLLVGDGSFSGHFAHPNYQSTPGI
LVNKNVKVDELSKTLPNKSNIQKSLSCLNEETLGNSSTSTPACSVEKHHSLQCAWEEKKE
HCVALKLKYPHTGRIQSLPSLNFMEKVGAWNVSQPEKMSDSLAFCDPSGISAGRKAYSAI
VNSSSHILSIRNSSGDPKDYVATSSRETESLANLHFPNENLVLVRPLTRSQSDDSVNVAS
RNPSLTEVIQPANSTQAVQPLEEESDILGVSENKESSSSLVGSMLRKFSGHLVVTGSSDE
DVESSSKEQSSDPDVFISSERVDQLLRGDGNSQTDDQESCGGLENQKESHNLDVTTGHVT
MEHFSDVSPDSLNLLASSGGSSQVDLGSAGRSSVVSRRFFTSSEEDNFVPFGVTPLKTPE
KEELNIEERIPVYLRNLGIDQSPGSILTPFIPRGPIREVEFSPSELRTLKDSTDTLRKTA
QRPRDDLLAAVDITQTSFNSGTSTLSMSIPMGSEVGSAILLPSELSPCFSRSSGDRPVSQ
CNISCHQQELTASHCVESRAEDSAVSKLAEPNQQLQTVSLDCCSDGKSPMLAAKHVRDLV
AKNESKEVNSSLQRWPAGCLAGVKNEMEVVIGSQPSSVGTSVNERNKDQESDSLIGSDAL
KEIRKLLAEAEDIAGSWCDPIISTASSRETVDSSPVLIEKEDDPKDSRIVKDNVPEFRRL
LSWDEATTRRSMQEEGSVIKALNSYHGSMRWGSSLDVAVHNSEKMMQEMTKEFRTGKSVG
RSEPEGCSSATTDRNVPAFVTAQSNASNEVSTGNTPELVNPSPSEPLGCISDALGDFQSV
LAKEASVAGSKEGGVGENDNSSSGDSLAARVRNLLRSGSPAIRATQTLRSAEEEERKARA
WVKLKLASRSQESVSELSEEDRRRIEEIKAELLLSAKKSGLAKVSRGCALEAAPEYSHNQ
EQDIKHSKASSNKKFHVDSRMQVFKTKELSESSSQQVVPIYRTNPSGYCLLSNTQSKSLS
TVQTPICSQHQTVATSDSHASVELHAPLQKERDTRVMRFPAASDIQMEEIHLQAQKKLSV
EKSSEEMTKQITSITFSSRKRSQSPLSSMVLSSSHTGGGLDGIMPLEVGSTSTEEHGLGK
QHWERSKICPPSSPVLAGSLSNEMAFTAAKDRFHHFSADASRTRGYQEDFPSNLGSASIH
ADEEQTCPAKKLEEVLPRDATELERHSARLLGVDRNVRFSQDMNRLHEPHSVSSYQGKNS
SLSHVQVDESLEWPGPTVQTDLLEDRINFLEKEKKSLSDKVSLIQKEVAREQISVSCHSS
PNQVLSTTSAYPSSPTKKVLSCVHITLSPKCSNLELCGDLNTENEVRLEKKLEVDTQRVS
SKGPETLLEAVSKLSTTDPVLTDQGSSSFPVPAASADSCLVLSSVPSTAGQELKPLQSCE
RPQATVLGSGGCNVKNSFNSVVSEKNGKTTSDAATQITTESPEKATFSAEIYVNSQGSEN
TIHQSSLQKTQDVPSCTTSSLERISSFPKQAGQPLLLPYKPSGSTEMYYVPYPKAGSRMS
PVASETTVESSHSGSNDAIPPRFPANAFGLRDDNAPDNTAPKHKEGIYSTRAKPKVAWTE
EKMIPLEVAPECTNHLQSVKTTHSIFKSAQFYLHPPMPMYDSYFLSNSELSEEYSDTGRA
RPSSNAFFQNWKNADRNQRVFSTHHRKNGENEFFPLTAEADYSKNEDIRISTSLGNKTVG
KELFQRGRREAEQKKARNYPLPCSQMSHFNENLETGLPGKRRTHSTSSLDELWTKFLERQ
KRHQHHDFRSDSELSLVERLDRLARVLQNPIKHTLVPTEPEKIASEKKIKGREQRFQEKN
TCESTLEPDAAHSEERPHINRNKNSLAEFRKNRAGEKTICHMNKILEHQQYLEAPSDTSS
EAGLSKDHGTVISSATSESDVVTQTEVETATLTEVSSSISTIDTARLIRAFGHERVRVSP
RLSQLYCTINRQKSRSEKWNKWSSKAMGVEYPKVTSERQRKRKEIQKAASISSDSASTSS
ISWGPSSALSNKRRIRMLNKGIQAGDLEIVNSATKKNTRDVGVTFPTPRSSQPNLRPWEP
WHCVDGIFGESDGLVTDHQVPGNKGKQKGQPGSFFVEKKMKKGRLHLPQGISWLVQAEDL
KSESKKENCSNSFSGPGPSWFEPLTSTKPWREPLREKNGQEQQPSNTVQPVVPERDAENR
SPQPFVKLTLQEALALHRPDFISRSGERVKHLKLVMEERRMQSVLQCEREQLFNPPEKRK
GYRNASCMLSERGYLFRQKRRTIPKSEMIQRSKRIYEQLPEVQKKREEEKRKSEYNSYRL
KAQLYKMKITNRVLGRKVPWN
NT seq
8346 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtggtatcagcttccagcagaactggatgtcagccgtttaactgctgtctca
gagacaaaacttggcctgacttgtgatagaaatgacctgacagagtcccctacgatggag
gaaggagtgttgccttcagcagaagcatccacaaggcagtgtcctggagagacgcatggc
ttacttctaaatattcaggacagtcgattctctccatgtcttccactgctgatgacatat
tcaacacaaggtcaaaaaattttaggtgatacgcttttccagcaatcagaaggggatttt
atttctttaagaggaatccctgatgtttccagtgcttctgaggtacattcgaagcctttg
cagatccatgaagcagtgtggctgacagatactgaaataccttctgatgctctcagtgac
tgccttactttgtctcagcatcctcttccattcggaaatgtggatccttgtgatgtcagt
tttagtggttatttgtctcagcaggcttttgctggacagctgcttctggacaaggagaca
aatgactataaaagtgatattagtgagaaggcattgctctcccaaacaggtgaaagttta
gcacgcttgacttcagataagatgctaaccgaagcaagtagactgaagcaaattgaagct
tctcctgcaaagcagacctatagtacttccgtaaaagatgaacgtttctcttgggacaac
aatgtaccagctcctactcttgagctttcggagaaagaagaaaagttactgagccatgat
gagttctcatcatcttcagaaaactcttgtaaaacggcattgacgaggaactctgaaaaa
tgtgaaaaagagatgcaaatggaaaaggtaaaaatggctgagagtgagtcagaagggttg
ataagagagatggagaagctagaaaaagaaaggaaggttcctgagcttggtttctctagt
acgttacctgatgatttaaggaaagacaattgtaaaaaagcagatacacgagatgtattt
tctgcggagaattctgaaatagccagactgtccaaggaacatggtgcagatctgaatgat
tctggaagcttgaagttaaaggaactccaagcagctgttctagctcaccataaacaacca
tcttctgcgatgcggtttgaaaaagaggaatttgtccctactgtgacagctaccagtgat
tgtgcacctaaacaactagttacgaccagcatgaaagctgtttcgccatgcagtgagaaa
gagagcgcacgagtggaagtagaacctggagtaagcaggactgaattaactatttcagat
ttttccatagaaaggggacataaagttacagatatttccccttcatttaatctccttgta
ggtgatggttcattctctggacactttgctcatccaaattatcagtctactccagggata
cttgtaaacaaaaacgttaaggtagatgaactgagcaaaacccttcccaacaaatcaaat
attcagaagtctctttcatgcttaaatgaagaaactttagggaactcctctaccagtaca
cctgcttgttctgttgagaagcaccattcactccaatgtgcttgggaagaaaaaaaagaa
cactgtgtggccttaaaattgaaatatccccacactggaagaatccagtctctcccatcc
cttaatttcatggagaaggtaggggcttggaatgtaagccagccagagaagatgtctgat
tcattggctttctgtgacccaagtggaatttctgctggaaggaaagcctacagtgcaatc
gtcaattcttcaagccatattttatcaatacgaaatagcagtggcgaccccaaggattat
gttgctacttcctctagagagacggagtcattggcaaatttgcatttccctaatgaaaac
ttagtgctcgtccgccctcttaccagatctcagtctgacgactcagtaaatgttgccagt
aggaacccctccctgactgaagttattcagccagcaaactcgacacaggcagtgcagccg
ttagaagaagagagtgatattttaggagtgtctgaaaataaagaaagcagtagtagttta
gtaggctccatgttacggaagttttcaggccaccttgttgttactggatctagtgatgag
gatgttgaaagtagcagtaaagagcaaagttcagacccagatgttttcatctctagtgaa
agagtcgatcagctccttagaggggatggaaactctcaaactgatgaccaggagagttgt
ggtggtcttgaaaatcaaaaggagtctcataacctagacgttactactggccatgtcact
atggaacatttcagtgatgtttccccagatagtctgaatcttcttgctagctctggggga
agtagccaggtggacttgggctctgcagggcgctcttctgtggtttctaggcgtttcttc
actagctcagaagaggataactttgtcccctttggagtaactcctttgaaaactccagag
aaagaagagctaaacattgaagaaaggatcccagtttatcttcgcaatcttggcattgat
cagtcacctggatctatactgactccatttataccccgaggaccaattagggaggttgaa
ttttccccttcagagcttagaacgctgaaggactccactgacacgcttaggaagacggct
cagcggccacgagatgacttgctggctgctgttgacattacacaaacaagttttaactct
ggcacttctactctcagtatgtctatcccaatgggttcagaagttggctctgctattttg
ttacccagtgaactctctccttgcttctcaagatcttctggagacagaccagtgagtcag
tgcaatatttcatgccaccagcaggagctaactgcctcccattgtgttgaaagcagagca
gaggattcagctgtctccaaattagcagaaccaaatcagcagctgcagacagtctcactt
gactgctgttctgatggaaagagtcccatgcttgctgcaaaacatgttcgagatctggtg
gctaaaaatgagtcaaaagaggtgaatagtagtctacagagatggcctgcaggttgtttg
gctggagttaaaaatgaaatggaagttgtgataggatcacaaccttcaagtgtaggtact
tctgttaatgagagaaataaagatcaagaaagtgattccttgattggatctgatgcattg
aaagaaatacgtaagcttctagcagaggcagaggatatagctggcagctggtgtgaccct
atcatttccactgcctcttctagagaaactgttgactcttccccagtgctaattgaaaag
gaggatgaccccaaagattccaggattgtaaaagacaacgtccctgaatttcggaggcta
ttgtcatgggatgaagctacgacccgcagaagtatgcaagaagaggggtcagtaataaag
gccctgaattcttaccacggcagtatgagatggggaagttctcttgatgtcgctgtacac
aacagcgaaaagatgatgcaggagatgaccaaagagtttaggacaggaaaatctgtagga
aggtctgagccagaaggctgtagtagtgcaactacagacagaaacgtacctgcttttgtg
actgcacaaagtaatgcaagtaatgaagtgagcactggaaatactccagagctcgtgaat
ccttctccatcggaacctctaggatgcatcagcgatgccctgggagacttccagagtgtc
ttggctaaagaagctagtgtagctggcagcaaggagggaggagttggagagaatgataac
agtagcagcggagattcactagctgcccgtgtcagaaaccttctcagaagtgggtcgcct
gcaatacgtgcaacacaaactttaagaagtgcggaggaagaggagaggaaagcacgagca
tgggtgaagctaaaactggccagtcgatctcaggaatctgtgtcagagctgagcgaagag
gaccgacgaagaatagaggagatcaaggcagagctgcttctgagtgccaagaaatctgga
ctagccaaggtttcaaggggatgcgctttggaagctgctcccgagtacagccataatcag
gaacaggacataaagcactccaaagcttcaagcaacaaaaaatttcatgttgacagccgt
atgcaagtcttcaagactaaggagctttcagagtcaagctcacagcaggttgtgccaata
tacaggactaatccttctggttattgcctgctgagtaatacacagtctaaatcgttgagt
actgttcaaacacctatctgcagccagcatcagacagttgcaactagtgattctcatgcc
agcgttgaacttcatgcaccattgcagaaagaacgggacacacgtgtaatgagatttcca
gctgcttctgatatacagatggaggaaatacatttacaagctcagaagaagctgtctgtg
gaaaagtcttctgaagaaatgactaagcaaattacttctatcaccttctcatcccgaaaa
cgttctcagtcaccactgagttccatggtactcagcagcagccatactggaggtggtctt
gatggaataatgcctttggaggttggctctactagtactgaagagcatggtcttggtaaa
caacactgggaaaggtctaagatctgtcctccttcaagtccagtgcttgctggttcactg
tctaatgagatggcatttactgctgccaaagacaggtttcatcacttttctgctgatgct
agcagaactagaggttatcaagaagattttccatcaaatctgggttctgcaagcatccat
gctgatgaagaacagacctgtcctgcaaaaaaactcgaggaagttctgcctcgagatgca
actgaattagagagacatagtgccagactcctaggggttgaccgtaatgtacgatttagt
caagatatgaatagacttcatgaaccccattctgtaagctcttatcagggaaagaacagc
tcactcagccacgtgcaagtcgatgagagtttagaatggccaggtccaactgtacaaact
gacttgctggaggaccgtattaatttcttagaaaaagagaaaaaaagtctctctgataaa
gtctccctcattcagaaagaggttgctagagagcaaatcagcgtgtcttgccattcctct
ccaaatcaggttttatccaccacatctgcatatccttcctcaccgactaaaaaagtactc
tcttgtgtccatataactctatccccaaagtgtagtaacttggagctgtgcggtgacttg
aatactgaaaacgaggtgagactagagaaaaagcttgaagttgatactcaacgagtgtct
tcaaaaggtccagaaactttattagaagctgtttccaaattatcaactactgatcctgtt
ctgacagatcaagggtcttcctcttttccagtgccagcagcttcagcagattcctgcctt
gtgctttcctctgttccaagcacagcagggcaagagctaaaacctctgcaaagctgcgag
agaccacaggccactgttctgggttcagggggatgtaatgtgaagaatagcttcaactct
gtagtttctgaaaaaaatgggaaaaccacttctgatgctgccactcagataacaacagaa
agtcctgaaaaagcaaccttttcagcagaaatttatgttaattcacaaggcagtgaaaat
acgatccaccagtcatctctccagaaaacacaggacgtccccagttgtacaacttcatcc
cttgaaaggatttcttcttttccgaagcaggctggtcagccgttattgctgccatataag
ccttctggaagtactgagatgtattatgttccttatccaaaggcaggatccagaatgtct
ccagttgcatcagaaacgactgttgagagctctcactcaggatcaaatgatgctattcct
ccaaggtttccagcaaatgcctttggcttaagggacgataatgctccagacaatacagct
cctaagcataaagaaggaatctatagtacgagggccaagcccaaggtggcctggactgag
gagaaaatgataccactggaagttgccccagaatgcacaaatcatttgcaatctgtaaaa
accactcactccatcttcaaatcagcacagttctaccttcatcctccaatgcctatgtat
gacagctacttcctgtctaacagtgagctatcagaggagtattctgatactggacgtgct
agaccttcctcaaatgctttcttccagaactggaaaaacgcagatcgtaatcaacgtgtt
ttctccactcaccataggaagaatggtgaaaatgaattctttccactaactgcagaagca
gattacagcaagaatgaagatataagaattagtacatctttagggaataaaactgtagga
aaggagctatttcaacgtggcagaagagaagcagaacaaaagaaggctagaaattaccct
ttaccatgcagccaaatgagtcactttaacgagaatctagagacaggcctgccagggaaa
cggagaacccattccactagcagcttagatgagctctggactaagtttttggagcgccag
aagagacaccagcaccatgattttaggagcgacagtgagttatcccttgttgagcgcctc
gatcggttggccagggtccttcagaatcccatcaagcatacgctagtacctacagaacct
gaaaagattgcttctgaaaagaagattaagggaagagagcagaggtttcaggagaaaaac
acatgcgaaagtaccttagagcctgatgcagcacatagtgaagaaagaccacatatcaac
cgtaataaaaatagccttgcagagttcaggaaaaatagggcaggagagaaaactatctgt
cacatgaataaaattttggagcaccagcagtacttggaagctcctagtgacacttcctca
gaggccgggcttagtaaagatcatggcactgtgatcagttctgcgacctctgaatctgat
gtggtgacccaaacagaagtggaaactgctactctgactgaggtgagcagttccatttcc
accattgacactgccaggctgatcagggcttttgggcatgaaagagtgcgtgtgtcgcca
agactgtcccaactttattgtaccatcaatcggcagaaaagtcgctctgagaagtggaac
aagtggagcagtaaagcaatgggtgtagaatatccgaaggtgacctctgagagacagagg
aaaaggaaagagatccagaaggcagcttctatttcatcagattcagcttctactagcagt
atttcttgggggccaagctctgctcttagtaacaagcgacggatacggatgttaaacaaa
ggtatccaagcaggagacttggagattgtgaacagtgcaactaaaaaaaacactcgagat
gttggtgtgacttttccaactccaagatctagccagccaaatctgcggccatgggaaccc
tggcattgtgtcgatggtattttcggagagtcagatggtttggtcacagatcatcaggta
ccaggaaacaagggtaaacagaagggacagccaggcagtttttttgtggagaaaaagatg
aagaagggcaggctgcatttgccacaaggaatttcctggcttgtccaagcagaggatttg
aaatctgaatctaagaaagaaaactgttccaattccttttctggtcctggtccatcttgg
tttgaaccactgaccagcacaaaaccctggagggagcccctccgagagaagaacgggcaa
gagcagcagcctagcaacacggttcagccagtggttccggaaagagatgctgagaacagg
tccccacagccgtttgtgaagctgacactacaggaggctcttgcattgcatcgccctgat
ttcatctcccgctctggagagcgtgtaaagcacctgaagcttgtaatggaggaaagaagg
atgcagagtgtattgcagtgtgaacgagaacagctatttaatcctcctgagaaaagaaag
ggctacaggaatgcaagttgcatgctctctgaaagaggctatctgtttagacaaaagaga
agaacgattccaaagagcgaaatgattcaaagatccaaaaggatctatgagcagctgcca
gaggtgcagaagaagcgagaagaagagaagagaaaatctgaatacaactcataccggcta
aaagcacagctttacaaaatgaaaatcacgaaccgtgtcttagggaggaaggtaccttgg
aactga
DBGET
integrated database retrieval system
