Struthio camelus australis (South African ostrich): 104148743
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Entry
104148743 CDS
T08512
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104148743 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104148743 (LSM1)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104148743 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
104148743 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104148743
NCBI-ProteinID:
XP_009680361
Ensembl:
ENSSCUG00000018791
LinkDB
All DBs
Position
Unknown
AA seq
188 aa
AA seq
DB search
MLQLLAQGTGVSAAAWRWLCRLLKLKCSSRVSVGEKSGSFHGLVQRICQEAVEVLISDHA
ISAVGVLPGSDEMFSLARNKVKDGCFLFLLIAAANLVLHQTVERIHVGKKYGDIPRGIFV
VRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQAKQESEKLKVQALKERGLSVP
RADTLDEY
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagctcctagcgcaaggaactggggtttcagctgctgcctggaggtggctgtgt
cgattgctaaagctgaagtgcagcagccgcgtttcagtaggggagaaatctggttccttt
catggtctggttcaaaggatctgccaagaagcagtggaggtgcttatcagtgaccatgcc
atctcagctgtgggtgtgttgcctggctcagatgagatgttctctttagctagaaacaaa
gtgaaagatggatgttttctttttctcttgatcgctgcagcaaacttggtgttgcaccag
actgtggagcgcattcacgtgggcaagaagtatggggacatccctcgaggcatctttgtt
gtgagaggcgagaacgttgttctgctgggggaaatagacctggaaaaagaaagcgacaca
cctttacagcaggtctcgatagaggagatcctggaggagcagcgggtggaacagcaggcc
aagcaagagtcagagaagctgaaagtgcaggcgctaaaggagcggggcctttcagtcccg
cgggcagacaccctggacgagtattag
DBGET
integrated database retrieval system
