Struthio camelus australis (South African ostrich): 104148981
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Entry
104148981 CDS
T08512
Symbol
DCHS1
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scam04515
]
104148981 (DCHS1)
Cell adhesion molecules [BR:
scam04515
]
Cadherins
Cadherin related
104148981 (DCHS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Pro-kuma_activ
Motif
Other DBs
NCBI-GeneID:
104148981
NCBI-ProteinID:
XP_009680681
LinkDB
All DBs
Position
Unknown
AA seq
2616 aa
AA seq
DB search
MGSATLVIILRAQAHGVTATDADSGPFGSLSYSIGSGIGSVVPTQFSIDENTGQLCTVQP
LDRDEGTSAYDFTITAVDGGGLNSMVYVKVFLEDVNDNRPVFYPLEYAVSISTQSMPGTA
VLRVTAHDKDDGLHGKVAYHIVLGNTPPLFSLNKDTGVISLSWSLSGKANTLVQLVISAR
DGGGLQAQPNARVNISIVEGTVSPPVFEQAQYFFTVSEDMLPGASVGAVRAQNPPGHAED
IFYSISSGDPHGYFSIDSGSGQLCTSLPLDHESQAVLILDVQARSGSPPAYSNTRVKISV
SDVNDNVPVFPAPSDSILLPEATEPGTTVYTLQAEDRDSGANGQVHFELVSGGNGIFSVE
RSSGAVRLIGALQYEASAAYGLAIVARDGGIPQLSSTFTLLVHVQAEHDNGPIFDTLTYR
VEVREGVPVSTRFLQVRALARDAEATTLTYHLRADGDAASFGIMPESGWLYVKSALDREM
RDLYVLTVLASAGGSGAGGEARKTGTSTVRISITDENDNSPRLSEDRYFFTIPENQAPGS
SVGRVMASDRDAGQNSRLTYRLLQHDPNFLIHTQTGELSTKHSLDREQQSSYQLLVIVQD
GGAPPRSATGTIYVTVLDENDNAPAFLHVASGQELPVQVLEEKPSGLLVASLQAKDPDEG
ENGTIIYSLTGAWAERFTLHVATGELRTATVLRRLDRAEYIFTVTASDRGTVPRSTSAVV
RIQVLPSSRVLPRPDATVLTLHPLEGVKPGSVIGSVAPPDAPVRGQLTYTVVGGGGDGTF
VVDSVTGEIYAARELDYEAGARHTLQVSAEDMQYGYPSSRLVLVQIHVQDCNDQAPTFPE
DPITIVVPENTQAGSSIFTFQALDGDGVGPNSQVRYALLRQEPPGAPFQLDSRSGLLTLR
EGLDREAAASFLLVVEAMDQARNVSQRRSAAVTARVFVTDENDNTPVFLSPAAVSIMEDQ
PTGFVALHVVAQDDDLGENGRVSYSLRAGNSDGRFHLNPSTGALSIVRALNREEMGQHNL
TVVATDHGFPRRSATQLLSVLVLDVNDEAPIFERPEYEAHVMENLPAGSPVLQVLATDQD
LGANGQVSYGGLSGGPFSIHPQTGLIVTTQALDREEQEQHVVMVYARDGGLPPNLSKATV
RITVGDENDHAPHLESESCSLEVPENQSCVALYTLRATDPDGGENGRLEYHVADGDPGQD
FSLDPVSGILSTARALDREQVASYSLTVVVQDHGTPPRSATMSVSVRVLDLNDNAPSFAQ
ATYTVEVSEDLPVGTLVLQLVAQDPDEGTNGQVSYYLGNESLGMFQVEPQSGRITSAHAL
DRERHPSYSFLARAVDSAPWEPKSAAVRVTVTVRDVNDHAPAFLHSPLTVNLSRHTPLKQ
VVATMRAEDRDAGANASILYRLATPNPAFAINSYTGDIQLLQPLGSLQPALSSTGVVVIH
LQEEPYRGLRFPRSTSEVALPENAAPGTAVVSIQAMHTGGSSGRITYSIVSGNEKNAFLI
QPLPGAISVQDSSSLDFEASPRLRLVVQAETTASFGFMAINLNLQDVNDNLPRFQLQNYV
AFIWESQSYDSPVIQVLADDLDQGANGQVTYAINQSLPMTGLYHIDPQTGTITTAAILDR
EIWSQTRLVITAMDRGMPPLVGSATLTVVVMDINDNSPTIPLPWEVRVPENTLLGTQIAQ
LTGNDVDSGPTLSYTLVLDGDAMGTFSVLRYGGHIALTGPLDYEQRSHYTLTLRASDTRH
ETEANLTIVVEDVNDNAPTFSQGFYQVTLPEHTPAGSTILTISATDPDSGSNGDVTYHLA
MPSPDVAIDPSNGTLFTIRQMEFDASQPTLDLVVEARDCGSPSLSAWATVQLQVLDVNDH
SPSFQAPRYNTSIPEDLRPGTTVLMLEAGDADLSRENAGFDYTIVSGNGGNAFQVESRVA
WAGGHLRTQGALVLVEPLDFEAIPLYNLTVAASDRGLPQRSATVPVLITVQDINDNPPVF
ARAEYRTAVSESAPPGTELLRVVAQDADSGPRGRVRYTISSGDQHGVFQLHESTGALCLA
RPLDREAQALHALVVQATDGPGEHFALVPVAIEVKDVNDNKPYFPVEVLSASMRENLPPG
TLVTTLRAVDADTGIFGELRYAVLEQPVGDPGVAEGWDAFAINSSSGELRSRLTFDYERA
KAFQLLVRATDAGNASATVTVRVLVTGEDEYDPIFLSPSFSFEVPEGARKGQSIGRVLAT
DEDEGADGVVLYSLAKPSPYFAVNQTTGTIYLRMDSQPQAGAGRATQAGAGRAKREPREM
SLEVQARSPLPASRSASTQVTIDVTHTSFGLAPDLNLLLVVAVAASLGVVVVLAAVAIVL
AMVLATHLHSAIPPGLVHRALMALFVPHRQVLVPGAGRYLSLEQVRDLIQPSPATLMSVL
KWLQGHGVGSCRSVSTLDFLECRMPVSTAEQLLPGAEFHRYVKGRRSVVRSPLPYTIPKE
LAEHIDFVGGLHRFPAERKVISRAWTKKDKESRQHHRGGRVAFHLGVTPFIIRKRYNMTG
GDIGLLPNNSQACAQFLEQYFHQADVAEFMQLFGSSFGHRSQVDQVVGHQGWGKAGLEAS
LDVEYLMSTGANISTWVFSNAGTDTSSGVGLVCSAL
NT seq
7851 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtgccacccttgtcatcatccttagagcccaggcccatggggtgacagccaca
gatgcagacagcggcccgtttggctccctctcctactccatcggttctggcattggcagc
gttgtccccacgcagttcagcattgatgagaacacagggcagctgtgcactgtgcagcct
ctggaccgtgatgagggcacatctgcctacgacttcactatcactgctgttgacgggggc
ggtctgaactccatggtgtatgtgaaggttttcctggaggatgtaaacgacaaccggcca
gtgttttacccactggagtatgctgtcagcatcagcacacagagcatgccggggacagct
gtgctgcgtgtcactgcccatgacaaggacgacgggctgcatgggaaagtggcctaccac
attgtcctggggaacacacctcctctgttctccctcaacaaggacacgggtgtcatctcc
ctctcatggtccctgagcggcaaagccaacaccctggtgcaactagtgatctctgcacga
gatggtggaggcctgcaggcacagccaaatgcccgggtgaacatcagcatcgtggagggc
acggtctcaccccctgtctttgagcaggctcagtacttcttcacagtgtctgaggacatg
ctgccgggtgccagtgtgggggctgtccgggcccagaaccctccaggtcatgctgaggac
atcttttattccatctcttcgggggatccgcatggctatttttccatcgactctgggtca
gggcagctctgcaccagcctgcctcttgatcatgaatctcaggcagtcctcattctggat
gtccaggcccgaagtggttcaccccctgcctatagtaacacacgtgtgaaaatctctgtg
tcagatgtgaatgacaacgtgccagtgttcccagctccctctgactctattctgctgcca
gaggccacagaacctgggaccacggtgtatactttgcaggctgaggaccgggacagcggt
gccaatggtcaggtgcatttcgagctggtatcaggaggcaatggcatcttcagtgtggag
cgctcatcaggggcagtgcgactgattggggcactgcagtatgaagccagcgctgcctat
gggttggccattgtggcccgggatggaggcattccccagctcagctccacgttcacgctg
ctggtgcatgtgcaggctgagcatgacaacgggcccatctttgacacactcacctaccgt
gtggaggtgcgggaaggtgtgcctgtctccacccgcttcctgcaagtgcgggccctggca
cgtgatgcggaagccacaacccttacctaccacttgcgtgcagatggggatgctgccagc
tttggcattatgcctgagagtggttggctgtatgtcaaaagcgcgctggaccgggagatg
cgggacctgtatgtgctcacagtactggcctcagcaggaggtagtggtgcagggggagaa
gcccggaaaacaggcaccagcactgtacggatcagcatcactgatgagaatgacaacagc
ccccgactgagtgaggatcgctacttcttcaccattcccgagaatcaggctcctggtagc
agtgtggggagggtgatggcgagtgaccgggatgccgggcagaacagtcggctcacctac
cgcctgctccagcatgatcccaacttccttatccacacacagacaggagagctcagcacc
aaacatagcctggaccgggagcagcagtccagctatcagctgttggtgatcgtgcaggat
gggggagcaccaccccgcagtgccacaggaacaatctatgtcactgtgctggatgagaat
gataatgcccctgctttccttcatgtggccagtggtcaggagctgcctgtgcaggtgctg
gaagagaagccatcaggacttctagttgcctccctgcaggccaaagacccagatgagggt
gagaatgggaccatcatctactcgctgacaggagcctgggccgagcgtttcacattgcac
gtggccactggagagctgcgtactgccacagtgttacgccgacttgatcgtgctgagtat
atcttcactgtgacagccagtgaccggggcacggtgcctcgcagtacatcggccgttgtc
cgcattcaggtgctgccatcttcccgggtgctaccacggcctgatgccactgtgctgacc
ctgcaccccctcgagggggtcaagccagggtctgtgatcggctcagtggcccccccagat
gcccctgtgcggggacagctgacctacacggtggtaggaggtggtggggatggcaccttt
gtggtcgacagtgtgacaggggagatctatgcagccagggaactggactatgaagctggg
gcacggcacacgctgcaggtgagcgctgaggacatgcagtatggttatccctccagccgg
ctggtgctggtacagatccacgtgcaggactgcaatgaccaggcacccacgtttcctgaa
gaccccattaccatcgtggtgcctgagaacacccaggctggctcgtccatcttcaccttc
caggcactggacggggatggcgtgggtcccaacagccaggtgcgctatgccctgctgcgc
caggagccacccggggcccccttccagcttgacagccgctcagggctgctgaccctacgc
gagggccttgaccgggaggctgctgcctccttcctcttggtggtggaggccatggaccag
gcccgcaatgtcagtcagcgccgctcggcagctgtgacagcccgcgtgtttgtgactgat
gagaacgacaacacgcctgtgttcctctcgcctgctgctgtcagcatcatggaggaccag
ccgactgggtttgtggctctgcatgtggtggcccaggatgacgatttgggagagaacggg
cgtgtgagctactcgttgcgagcaggcaacagtgacggccgcttccacctcaatcccagc
actggtgcactctccatcgtgcgggctctgaaccgggaggagatggggcagcacaacctg
accgtggtggccacagaccacggcttcccacgccgctcggccacacagctgctctctgtg
ctggtcctggatgtcaacgacgaggctcccatttttgagaggcccgagtacgaggcacat
gtcatggagaacttgccagctggcagccctgtgctgcaggtgctggccacggaccaggac
ctgggtgccaatgggcaggtgtcctatgggggtctctctggagggccattctccatccac
ccacagacggggcttattgttaccacacaagcactggaccgtgaggagcaggagcagcat
gtggtgatggtctatgcccgggacggtggcctgcctcccaacctctccaaggcaactgtg
cggatcacagtaggggatgagaatgaccatgcaccgcacctggagagtgagtcctgctcc
cttgaggttcctgagaaccagagctgtgtggcactctacaccctgcgggccaccgatcct
gatggaggcgagaacgggcgcttggagtaccacgtggcagatggagaccctgggcaggat
ttcagcctagaccctgtctctggcatcctctccactgcacgtgccctcgaccgggaacaa
gttgcttcctacagcctcacagtggtggtgcaagaccatggcacgccaccacgcagtgcc
accatgtcagtgagcgtgcgggtgctggacctaaatgacaatgcacctagttttgctcag
gccacctacacagtggaggtgtcagaggacctgcccgttggcaccctggtgctgcagctg
gtcgctcaggatcctgatgagggcacaaacgggcaagtctcctactacctgggtaatgag
tcgctgggcatgttccaggtggagccacagagtgggcgcatcacaagtgcccatgccctg
gaccgggaacgccaccccagttacagcttcctggccagggctgtggactcagcaccatgg
gagcccaagagcgcagccgtgcgtgtcacagtcacagtacgggatgtcaatgaccatgcc
cctgccttcctgcacagcccactcactgtcaacctgtcccgtcacacaccgctcaagcag
gttgtggccaccatgagggcagaggacagggacgcaggtgccaatgcctccatcctgtat
cgccttgccacccccaatcctgcctttgccatcaactcctacacgggggatatccaactg
ctgcagccccttggctcgctgcagccggcactctcctccactggtgtggtggtgatccac
ttgcaggaagagccctaccgagggctgcgctttccccggagcaccagcgaagtggctctg
ccagagaacgctgccccaggcacagcagtggtgagcatccaagctatgcacacagggggc
tcgtctgggcgcatcacatacagcatcgtcagtggcaacgagaagaatgctttccttatc
cagccgctcccaggtgccatctcagttcaggactccagcagcctggatttcgaggccagc
ccccggctgcgccttgtggttcaggcagagacaacagcttccttcggctttatggccata
aaccttaacctgcaagacgtgaatgacaacctgccacgcttccagctgcagaactacgtg
gccttcatctgggagtcacagagctatgactccccagtcatccaggtcctggcagatgat
ttggatcagggggcgaatgggcaggtgacttatgccatcaaccagtccctgccaatgaca
ggcttgtaccacatcgatcctcagaccggcactatcactacagctgccatcctggacagg
gagatctggtcccagacccgtttggtgataacggcgatggacagagggatgcctcctctt
gtgggctctgccacactgactgttgtggtgatggacatcaacgacaacagccccaccatc
cccttgccctgggaggtgcgggttccagagaacacgctactgggcacccagatagcccag
ctgacagggaacgatgtggactcaggccccacgctctcctatacacttgtgctggatggt
gatgccatgggcaccttcagtgtgctgcggtacgggggacacatcgccctgacaggacca
ctggactatgaacagcgcagccactacaccctcaccctgcgtgcctctgacacccgccac
gagaccgaggccaacctgaccatcgttgtggaggatgtgaacgacaacgcaccaactttc
agccagggcttctaccaggtgacgttgccagaacacacacctgctggcagcaccattctc
accatcagcgccaccgacccggactcgggcagcaatggggatgtcacctaccacttggcc
atgcccagccctgacgtcgccatcgaccccagcaacgggaccctgttcaccatccggcag
atggagttcgatgccagccagcccactttggacctggtagtggaggcccgcgactgtggc
tcacccagcctctcagcctgggccacggtgcagctccaggtgctggatgtaaatgaccac
agccccagcttccaggcgccacgctacaacaccagcatccctgaggacctgcgcccagga
accacagtgctgatgctggaggcaggcgacgcggacctctcccgggaaaatgctggcttt
gactacaccattgtcagtggcaacggtggcaatgctttccaggtggagagccgggtggcc
tgggctggggggcatctccgcacacagggtgccttggtgcttgtggagcccttggacttt
gaggccatcccactctacaacctcaccgtggcggcctccgaccggggcctgccacagcgc
agtgccacagtgcctgtgctcatcactgtgcaggacatcaacgacaacccgcctgtgttt
gcccgagctgagtaccgcacagcagtgagtgagagcgcaccccctggcacagagctgctg
cgtgtggtggctcaggatgctgattcggggccccgcggccgcgtgcgctacaccatcagc
tcaggcgaccagcatggggtcttccaacttcatgagagcacgggggccctgtgcctggca
cggcccctggatcgagaggcccaggcgctgcatgcccttgtggtgcaggccacagatggg
ccgggggagcactttgcattggtgcctgtagccattgaggtgaaggatgtcaacgataac
aagccctacttcccagtggaggtgctgagcgccagcatgcgggagaacctgccacctggc
acgctggtcaccaccctccgtgctgtcgatgcggacaccggcatctttggggagctgcgg
tatgcagtgctggagcagccggtgggggaccctggcgtggcagagggctgggatgcgttc
gccatcaacagcagctctggggagctgcgctcacgcctcacctttgactatgaacgggcc
aaggccttccagctcctggtcagggccaccgatgctggcaatgcctctgccactgtgact
gtgcgggtgctggtgacaggggaggatgagtatgaccccatcttcctcagcccctccttc
agctttgaggtccctgagggtgcccgcaaaggacagagcatcgggcgggtgctggcaacg
gacgaggatgagggggccgatggtgtcgtgctgtactcccttgcaaagccctcaccttac
tttgctgtcaaccaaaccacaggcaccatctacctgcgcatggacagccaaccccaggcc
ggggctgggcgtgccacccaggccggggctgggcgtgccaagagggagccacgtgagatg
agcctggaggtgcaggcacgcagccccctgcccgcctcccgctcggcctccacgcaggtc
accatcgacgtcacgcacacatcctttggcctggccccagacctcaacctgctgctggtg
gtggccgtggcagcttcgctaggcgttgtggtggtgctggctgccgtggccatcgtgctg
gctatggtactggctacgcacctgcactctgccatcccgccaggcctcgtgcacagggca
ctcatggccctctttgtgccccacaggcaggtacttgtccctggagcaggcaggtacttg
tccctggagcaggtgcgggacctcatccagccatccccagccacactcatgtctgtgctg
aagtggctgcagggccatggcgtggggagctgcaggagcgttagcacccttgatttcctg
gagtgccgcatgcctgtgagcacggctgagcaactcctaccaggggccgagttccaccgc
tacgtgaaaggccgacgcagcgttgtgcgctccccgctcccctacactatccccaaggag
ctggctgagcacattgactttgtgggaggtctgcaccggttccctgcagagaggaaggtg
atcagcagagcctggaccaagaaggacaaggagtcaaggcagcaccacagaggaggaaga
gtggctttccatctgggcgtgacacccttcatcattcgtaaaagatacaacatgacggga
ggagacattgggttactgccaaacaacagccaggcctgtgcccagtttctggagcagtat
ttccaccaggcggacgtggctgagtttatgcagctctttggcagcagctttggccatcgc
tctcaagttgaccaggtggttgggcaccagggctggggcaaggctgggctggaggccagt
ctggatgtggaatacctcatgagcacaggagccaacatctccacgtgggtcttcagcaat
gcaggtactgatacctcctctggtgttggtctggtttgctctgccctgtga
DBGET
integrated database retrieval system
