KEGG   Struthio camelus australis (South African ostrich): 104149020
Entry
104149020         CDS       T08512                                 
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
  KO
K13174  THO complex subunit 5
Organism
scam  Struthio camelus australis (South African ostrich)
Pathway
scam03013  Nucleocytoplasmic transport
scam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:scam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104149020 (THOC5)
  09122 Translation
   03013 Nucleocytoplasmic transport
    104149020 (THOC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scam03019]
    104149020 (THOC5)
   03041 Spliceosome [BR:scam03041]
    104149020 (THOC5)
Messenger RNA biogenesis [BR:scam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     104149020 (THOC5)
Spliceosome [BR:scam03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104149020 (THOC5)
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 104149020
NCBI-ProteinID: XP_009680744
Ensembl: ENSSCUG00000014912
LinkDB
Position
Unknown
AA seq 721 aa
MGLADRSLGDPILGASVPLHMLTWFFVPQPCQAAPGSTMSSDSSKKRKPKVIRTDGGPQE
GKRGKADADQDARYYSEEGEVDLRDPIKDYELYKETCQELQRLMAEIQELKSRGIKDNAL
EIDERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQK
EITKCLEFKSKHEEIELVSLEEFYREAPPEISRPAITLSEPHQQTLARLDWELEQRKRLA
EKYKECLANKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETAR
HLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKALYKPPEDSQDDESDSDAEEEQTT
KRRRPTLGVQLDDKRKEMLKRHPLSVTVDLKCKDENVLHLTFYYLMNLNVMTVKAKVTTA
VELTTPISAGDLLSPDSLLSCLYPGDHGKKTPNPANQFQFDKVGILTLSDYVTELGHPYV
WVQKLGGLHFPKDQPQHVVTADNSLSASHMEMTVKLLRTRLQSRLALHKQFASLEHGVVP
VSSECQHLFPSKIVSRLVKWAAIPYEDYAELPYTRDVLEAGLAEDTHLYYMALIERGTAK
LQAAVVLNPGYSTLPPIFSLCLNWKGERTSSNDDNIRAMESEVNVSYKELWGPKPGYQLL
TNQLQRLCMVLDVYLETESHDTSVEGPKEFPQEKMCLRLVRGPTRMKPFKFNYPQGFFSH
R
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgggcctggcagacaggagcctgggggaccccattctgggtgcctctgtccctcttcac
atgctcacttggttctttgtcccccagccctgccaggcagctcccggcagcaccatgtca
tcagattccagcaagaagaggaagcccaaagttatccgcaccgatgggggcccacaggag
ggcaagcggggcaaggccgacgctgaccaggatgctcggtactacagtgaggagggtgag
gtggatctgcgtgaccccatcaaagactacgagctctacaaagagacctgccaggagctg
cagagactcatggcagaaatccaggagctgaagagcagaggcattaaggacaacgctttg
gagatagatgagcggcgcattcagagctgtgtccacttcatgaccctcaagaaactcaac
cgcttggctcacatccggctaaagaagggaagagatcaaacacacgaggcaaagcagaag
gtggatgcatatcacttgcagctccagaacctgctctacgaggtgatgcacctgcaaaaa
gagatcaccaagtgcctggagttcaagtcgaaacacgaagagattgagctggtgagcctg
gaggagttctacagggaggctccacctgaaatcagcaggccagcgatcaccctgtctgag
ccccaccagcagactctcgcccgcctcgactgggagctggagcagcgcaagcggttggca
gagaagtacaaggagtgtctggccaacaaggagaagatcctgaaggagattgaggtgaag
aaggaatatctgagcagtctccagcctcggctcaacagcattatgcaggcctctctgccc
gtccaagagtatctcttcatgcccttcgaccaggcacacaagcaatacgagacggctcga
cacctgccgccgccgctctacgtcctcttcgtccaagccagcgcctatgggcaggcctgc
gataagaagcttgttgtggccatcgaagggagcgtcgaagaagccaaagccctgtacaag
ccgcccgaggactcgcaggatgatgagagcgattcggacgcagaggaggagcagactacg
aaacggcgcaggcccacgctgggtgtgcagctggacgacaagcgcaaggagatgctcaag
cgccacccgctttccgtcaccgttgacctgaaatgcaaagatgagaacgtgcttcacctg
accttctactacctgatgaacctcaatgtcatgactgtgaaagccaaggtgaccaccgct
gttgagctgacgacccccatcagcgccggagacctgctgtccccagattccctcctgagc
tgcctgtacccgggagaccacgggaagaaaacaccgaacccagccaaccagttccagttc
gataaagtgggcatcctgaccttgagcgattatgtgactgagctggggcatccctacgtg
tgggtgcagaagctgggcggcctgcacttccccaaggaccagcctcagcacgtggtcacc
gcagacaactcgctgagcgcaagccacatggagatgacagtgaagctgctgcggacgagg
ctgcagtcgcgcctggctctccacaagcagtttgcgtcactggagcacggtgtcgtgcca
gtgtccagcgagtgccagcacctcttcccttccaagatcgtctcacgcctggtgaagtgg
gctgctatcccctacgaggactacgcggagctgccctacaccagggatgtgctggaggct
ggcctggctgaggacacccacctctattacatggccctgattgaacggggaacagccaag
ttgcaggccgccgtggtgctcaaccccggctactccacgctgccgcccatcttcagccta
tgcctcaactggaaaggggagcggaccagcagcaatgatgacaacattcgggccatggag
agtgaagtcaatgtgagctacaaggagctgtggggacccaaacctggctatcagctcctc
accaaccagctgcagcgcctctgcatggtgcttgacgtctacctggagacagagtcacac
gacaccagcgtggaggggcccaaagagttcccccaggagaagatgtgtctgcgccttgtc
agggggcccactcgtatgaagccgttcaagtttaactacccacagggtttcttcagtcat
cgctga

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