Struthio camelus australis (South African ostrich): 104149098
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Entry
104149098 CDS
T08512
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03013
Nucleocytoplasmic transport
scam03015
mRNA surveillance pathway
scam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104149098 (CASC3)
09122 Translation
03013 Nucleocytoplasmic transport
104149098 (CASC3)
03015 mRNA surveillance pathway
104149098 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104149098 (CASC3)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104149098 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
DUF5324
Motif
Other DBs
NCBI-GeneID:
104149098
NCBI-ProteinID:
XP_009680875
Ensembl:
ENSSCUG00000015859
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
ESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESAKVELKQDSNDSCESAAKAEKGDEKPD
SKGAVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEDRQNPAYIPRKGLFFEHDLRGQT
QEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAHNPDDIKPRR
MRKPRFGSPPQRDPNWSNERPSKPPRHQGPDNASTPPRTFTNRSSAGTGRMPPPRNYPRM
GGYKETRPSYRASEASVQHLSRNGEQAKQESSYRAKRVEQTPARDKSPEMEVAHVHSSPV
KEEVALESQATTADAAQPPPDRPIEKKSYSRARRTRIKAGDAGKLADEVPASEGLTPVPS
KPVQVETSPPPAKSSNWESPVESSLDGLEQEMTQMNLTEQNWTPGQSQFIQPRELRGIPN
HMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPEPAPPMHISIVEGHYYDPLQFQ
GPIYTHNENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPMANPGLYPPPVSMPPGQPPPQ
QLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPPHLYSNTQAQSQVYGGVTYYNTVQQQV
QPKPSPPRRTSQPVTIKPPPPEDSKSEKSKERSNT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
gaaagcgaagatggcattgaaggagatgctgtactctcagattatgaaagtgcagaagac
tcagaggcggaggaagaggattacagtgaggaagaaagtgcgaaagtggaattgaagcag
gacagcaacgattcctgtgaatctgcagcaaaagccgagaagggggatgagaaacctgac
tccaaaggtgctgtaactggtgagagacaaagtggagacgggcaggagagcactgaacct
gttgagaataaagttgggaaaaaagttcccaagcacctggatgacgatgaggatcggcag
aacccagcttacatcccacgcaaagggctcttctttgagcatgatctccgagggcagact
caagaagaggaggtcaggccgaagggtcggcagcggaagctgtggaaagacgagggccgc
tgggaacacgacaaattccgagaggatgagcaggcccccaagaccaggcaggagctgatc
gcgctttatggctatgacatcaggtcagctcacaaccccgatgacatcaagccgaggagg
atgcgcaaaccaaggtttgggagtcctcctcagcgagacccaaactggtccaatgagagg
ccgagtaagccgccaagacaccaaggcccagacaacgcttcaactccaccgcgaacgttc
accaacaggagctccgcgggtacagggagaatgcccccgcctaggaactatccacggatg
ggtggctacaaggagacccgccccagctatcgggcttcagaagcaagtgtccagcatctc
tctcgaaacggtgagcaggccaagcaggaaagcagttatcgagcgaagcgtgtagagcaa
accccggcgagagacaagtcacctgagatggaagtggcacatgtccacagcagccctgtg
aaggaggaggttgctttggaaagccaggctacaactgccgatgctgcacagccaccgcca
gacagaccaattgaaaagaagtcttattcccgggcaaggaggaccagaattaaagctggg
gatgcaggaaagttggcagatgaagtacctgcttcagaagggctgacgcctgtgccatcc
aaacctgtgcaagtggagacatcccccccaccagccaagagcagtaactgggaatcgcca
gtagaatccagcttggatggactcgagcaagagatgacgcaaatgaatctcactgagcag
aactggactccagggcagtctcagttcatacagccccgggagcttaggggtattcctaac
catatgcacgtgggaactgggccgccgcctcagtttaacaggatggaggaaatggcggtg
caggggggccgtgtgaaacgctactcatcgcagcggcagagaccgccggttccagagcct
gccccccctatgcacatcagcatcgtggaagggcactactatgacccactacaattccag
ggaccaatctacacccacaatgagaaccctgccccgctgcctccccaagggatgatcgta
cagccggaaatgcacctccctcatccaggtttacatccccaccagacgccagccccaatg
gcaaaccctgggctgtatcctccaccagtctccatgcctccgggccagccccctccgcag
cagctgcttgcacctacttatttctcccctcctggagtcatgaattttgggaatcctggc
tacccttaccccccaggagcactacccccaccgccccctcctcatctctattccaacacg
caggcccagtcccaggtgtatggaggggtcacatactacaatactgtccagcagcaagtg
cagcccaaaccttctccaccacgaaggacatcccagcctgtgactatcaagccaccacca
cctgaggacagcaaaagtgaaaaatcaaaggagaggagcaacacgtaa
DBGET
integrated database retrieval system
