Struthio camelus australis (South African ostrich): 104149591
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Entry
104149591 CDS
T08512
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104149591 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104149591 (NDC1)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104149591 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Myf5
Motif
Other DBs
NCBI-GeneID:
104149591
NCBI-ProteinID:
XP_009681563
Ensembl:
ENSSCUG00000014943
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MSVVILVISVFNVEFYAVVPSIPCSRLALIGKIIHPQQVLHSLVHAVMGMLVAWCAAVMT
KGKFQFLAVPCTCSESLDDAVPQMCLNEYHLFFLLSGAFMGYSYSLLYLVNNMNYLPFPI
IQQYKYLRFRRSVPLLIKHSCVESLYLVRNFCVAYYFFGYVPRVWISTTMDLHIDSKLHL
LDTLTGLLDLSLLYHAWLCGVFLLITWYIAWLLFKIYATETHHFPVQPTFAEETDQCLPK
ILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAISKECLSLLNDLT
QRLITQQEAAAANGRAKQPSGELKISPQTPGAIVTEDMSFQLQRSNVIPRAPMPSLVKSS
LLPLKMSPGSDIGTPFSSPVSNCKVGVLDLNSPWHGSVQSPHVMRRGPKLWTSHSDLQMN
GSHQESFPVLSVARAGSEAVQPSFIYTWLQNKQEQIKSFLSKRVLIMYFFSKHPEASIQA
VFSDAQMHIWALEGLSHLVASSFTEDQFGVVQTTLPAILNTLLTLQEVVDRHFKLPHVSS
KPPRISGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVSTEHKKRLQQFLEYK
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggtgatattagtaataagcgtcttcaacgttgaattttatgcagttgtgccg
tcaataccatgctctcgattagcactgataggaaaaattattcaccctcagcaagttctc
cattcgcttgttcatgctgtaatgggaatgttggttgcttggtgtgctgcagttatgaca
aaagggaagttccagtttcttgctgtgccctgcacatgttcagaaagcctagatgatgct
gttcctcagatgtgtctaaatgagtatcacctcttttttctactgtctggagctttcatg
ggatacagctatagtctcttgtatcttgttaacaatatgaactatttgccgtttccaatc
atacagcaatacaagtacttacgtttcagacgatctgtgcctctcctcattaaacacagt
tgcgtggaatcactgtatctggttagaaacttctgtgttgcatattacttttttggttat
gtcccaagggtatggataagtaccacaatggatcttcatatagacagtaaattgcatctt
cttgacactctgactggcttactggatctctccttgctctaccatgcctggttgtgtgga
gtatttctcctgattacctggtacattgcatggttactcttcaaaatttatgctacagag
acgcatcactttcctgtccaaccaacttttgctgaggagacagaccagtgcctacctaaa
attttaaacagcaaccctccgctcattataaagtttttagccttacaagacttgatgtta
ctttctcagtattctcctgttcgtcgacaggaagtctttagtcttagtcagccaggtggg
cacccacacaactggactgcaatatcaaaggagtgtttaagccttctgaatgatctgacc
cagaggctgatcacacagcaggaagctgcagcagcaaatgggagagcaaagcaaccatca
ggagaactgaaaatatctccacagactccaggagccattgtgacagaagacatgtccttc
cagttacagaggtcaaatgtcattcccagagcccccatgccttccctggttaaatcatcc
ctgttgcctttaaagatgtcacctgggtctgatattggtacacctttcagttcacctgtt
tcaaattgcaaggtgggagttctggatttaaactctccttggcatggatcagtccaaagt
cctcatgttatgagaagaggaccaaagctgtggacatcacattcagatctgcaaatgaat
ggttctcaccaagaatcctttccagtgctctctgttgcaagagctggcagtgaagcagta
cagcccagctttatttacacatggcttcagaacaagcaagaacagataaaaagcttcttg
tcaaaacgagtgctgataatgtatttcttcagcaagcatccagaagcctccatccaagct
gtcttttccgatgcccaaatgcatatctgggcattagaaggtctatctcatttggtagcc
tcctcatttactgaagaccaatttggagttgtccaaactacgctgccagctattctgaat
actttactgactcttcaggaggttgtagacagacatttcaaactgcctcatgtatctagc
aaacctcccaggatttcaggaagtctggtggacacatcctacaaaacactacgatttgca
cttagagcatctttgaaaacagcactgtaccggataactactgtctttggagaacatttg
aatgcagtgcaagtgtctacagaacataagaaaagacttcagcaattcttggaatacaaa
gaataa
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