Struthio camelus australis (South African ostrich): 104149619
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Entry
104149619 CDS
T08512
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104149619 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scam04990
]
104149619 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
scam04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
104149619 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
104149619
NCBI-ProteinID:
XP_009681622
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MGMDLGIDKRAGLGRASTPAPSGPLSKGDEKCVKVGWSTGEMLVVSRDAMGNLTSRVCSG
NVLLQSLGNARTEVCRVQMRLAAGKRPLNIGTVLTLAATVNRLNDSGKAARAHVGIGDVV
LTIDGISTDGMTHLEAQNKIKACTGNLNMTLQRVATVPKPDPVHVQKGEPKEVVKPVPIA
SPAAPKAASPASVAYNKTPRPFGAVASTKVTSIPSPSSAFTPSPAAPAPALSSTFVSPFL
LFFFPSCFLFLSYSCVRWENCSSCCPLLSSPRKNPPKRPPRKHIVDTYTEFYHTPTHSDA
SKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTDHMKEPEPEAAKKTNDSLEATQPVAFA
AASMRNMPASQENADARPAPANTASAAAVKPAGPQSAAKYSGWQPSNRAAPASGWTSNST
KPPAAAAAAPSDKLATAPPLPEPDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKS
WHPEEFNCAHCKTSMAYIGFVEEKGALYCEGCYEKFFAPECSRCQRKILGEVINALKQTW
HVSCFVCVACHNPIRNNVFHLEDGDPYCETDYYALFGTMCHGCEFPIEAGDRFLEALGHT
WHDTCFVCSVCCDSLEGQTFFSKKDKPLCKKHAHSVNI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggggatggatctagggattgataaacgtgcagggctaggaagagcgtcgacgcctgcc
ccctccggccctctctccaagggagatgagaagtgcgtcaaagttggctggtcgacagga
gagatgttagtcgtctcgcgggatgcgatgggaaaccttacgagtcgagtttgcagcggt
aacgtgctgttgcagagcctgggaaatgccagaacggaggtttgcagggtacaaatgcgt
cttgcagcgggtaaaaggcccttaaatattggaactgttctaactttggctgctacggta
aatcggctgaacgacagcggcaaggcagcccgagcgcacgtgggcataggcgatgtggtt
ctcaccattgacggcataagtacagatgggatgactcatctggaagcacaaaacaagatc
aaggcgtgtacaggcaatttgaacatgactctgcaaagagtggcgaccgtaccaaaacct
gatcctgttcacgtacaaaagggagaacctaaagaagtagttaagcctgtgcccattgcc
tctcctgctgcacccaaagccgcgtccccggcgagcgtggcttacaataagacaccgagg
ccgttcggggcggtcgcttccaccaaagtcacttccatcccgtcaccgtcctccgccttc
accccgtcccccgcggcccccgcgccggcccttagctccacttttgtttcacctttctta
cttttttttttcccctcttgttttctttttctctcttattcctgtgtacgctgggaaaac
tgttcctcttgctgtcctcttctgtcctctccaaggaaaaacccacccaaacgtccgccg
cggaagcacattgtggatacctatacagagttttatcacacccctactcacagcgatgcc
agcaagaagcggctgatcgaagacactgaggactggcacccccggacagggaccacccag
tcgcgctccttccgcatccttgcccaaatcaccggcaccgatcatatgaaagaaccagaa
cctgaagctgcaaagaagactaacgattccctggaggctacccagcccgttgcttttgcc
gccgcctcgatgaggaacatgcccgcgagccaagaaaacgcggatgctagacctgcgccg
gccaacaccgcatctgctgcagccgtcaagccagccggaccccagagtgctgccaagtac
tcgggctggcagccttcgaaccgagcagcccctgcaagcgggtggacatccaacagcacc
aaaccgccggcggccgccgccgccgccccaagcgacaagctcgcgacggcacctccgctc
ccggagccggacacgttggttcagagggcagagcatatcccggcgggaaagcgcacccca
atgtgcgcccactgcaaccaagtcattaggggacccttcttggtggctttggggaagtcg
tggcacccagaggagttcaactgtgcccactgcaagacctccatggcctacatcgggttt
gtggaggagaagggagcgctgtactgcgagggctgctacgagaagttcttcgcccccgag
tgctcgcggtgccagaggaagatccttggcgaagtaataaatgctttgaaacaaacttgg
catgtttcctgtttcgtgtgtgtggcctgtcataatccaatccgcaataatgtcttccac
ttagaagatggtgatccctactgcgagacggattactatgccctcttcggtaccatgtgc
cacggctgtgaattccccattgaagctggagaccggtttcttgaagccctgggccacact
tggcatgacacttgcttcgtatgctcagtgtgttgtgacagtttggagggtcagactttc
ttctccaagaaggacaagccactgtgcaagaaacatgctcactctgtcaacatctga
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