Struthio camelus australis (South African ostrich): 104149716
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Entry
104149716 CDS
T08512
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104149716 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
scam01001
]
104149716 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
scam04054
]
104149716 (CIITA)
Enzymes [BR:
scam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104149716 (CIITA)
Protein kinases [BR:
scam01001
]
Serine/threonine kinases: Other
TAF1 family
104149716 (CIITA)
Pattern recognition receptors [BR:
scam04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104149716 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
Motif
Other DBs
NCBI-GeneID:
104149716
NCBI-ProteinID:
XP_009681794
Ensembl:
ENSSCUG00000016111
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MNLFKEILPRVRNILSSATASDDHALLNLMLKEDVISKEYHQSLLHEKDREDLARKISLT
FVEKWDLYLNTLVPLCCLKLCGNKPQNITDNEPTGSKCISDSKREIMDSAFVSENGYLDL
LHSDIDPLHLYTLFDPTSSGNEESDFSADPEMDTSNYDQFNNMDFFCTMENDENGDELYL
CSNTREAYARIAELAEYVLKDQQEKQMEDTFAGNLILDEMAAENTEKFTDVKMQKCHKRT
FLGSAESCSDVSEPKYKKIGSSTHLIPEYLPVSVKGSQENTNFAAPPQQIINFLIENGTS
NVIIYPVLTSSTESLIPASFPVNLCGLDVFKEVQVPVVPSEEPFKRPRPVEAFCTSLMDY
FRDTCKFVAMEREVTLDHLFIDGTLVQGQIETKSGKNSVKVMEKELVTCNLQGKEKAALE
RSQIFQIPGGKKLETKVIVVLGKSIFFQKICQDWSNGEFSLFEFVFWFEWKQISMPEKRY
SLKDLLLEFFVKPQEGSNEVFEYILQNPAKVLLVFDGFEGLHDNENFPRCSDSEPDKEVC
SIKELLSGLIQRKILNGCTLLLTTRPKDKVSQYVSKVDKTIEIVGFSPQQRELYITKYFE
GLPYCDNALKLIKDCQYLFSHCYSPVMCRFVCFLCETVLEMGDKGLPSTLTTLFLKFVQQ
KLTPLQGDLTPMQNQESLARLARIAWYLGEKHQSAMKSDLFPSKEVKEFALKYGFVLPFA
FPKHSDTGEEEFGNTFSNFAIQNFLGALHLMLAEEIKDKSLTKYLSFPSKKKKPYNWLDL
VPRFLAGLLFLQDDPDFCSFSNKDVKQSTKKQKTLLKYIRRLQINDLCPERLLELFHCIY
ETQNNYLLQHVALRLKPDLSFLGVVLTPPDVHVLHSILKRSRKEFSLDLQNSSIDMQGLK
DLIGLKNVASFRASLRDTIRLWKSLEQAKEYELLRMSTEKFVLDPFKAKTMKDISDLSDL
VEMQKMMISCVQDVSGWNSYEIPAIRNLRKLEFALGQVCGLQGFLKLVGILAAFPSLQHL
E
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttttaaggagatcctgcctagagtaaggaatattctctcaagcgctacagct
tctgatgaccatgcattgcttaacctcatgctgaaagaagatgtgatatccaaggagtac
catcaaagcttgctccatgaaaaagacagagaggaccttgcaaggaagatatctctgaca
tttgtggaaaaatgggacctgtatttgaacactttggttcccctctgttgtttaaaactg
tgtggcaataagcctcaaaacatcacagacaatgagccaacaggaagcaagtgcatttct
gacagcaagagagaaatcatggattcagcatttgtgtctgaaaatggctatcttgatttg
ctgcacagtgatattgatccattgcatctgtatactctctttgaccctacgtcatctgga
aatgaagaaagtgacttctcagcagatcctgaaatggataccagcaactatgatcagttc
aataacatggatttcttttgtacaatggaaaatgatgaaaatggggatgaattgtatctg
tgttccaacaccagagaagcttatgctagaatagctgaattagcagaatatgtgctcaaa
gatcagcaggagaagcagatggaagacacttttgcagggaaccttattttggatgaaatg
gctgctgaaaacactgagaaatttactgatgtgaagatgcagaaatgtcacaaacgaact
ttcttaggctctgcagagagttgctctgatgtttcagaacccaaatacaagaaaattggg
tcttcaacacatttgattccagagtatctgcctgtcagtgtgaaagggagccaagagaat
acaaattttgcagctcctcctcagcagataattaattttcttatagaaaatggcacatca
aatgttataatatatccagtgctgacttcttccactgaatcattgatccccgcaagtttt
ccagttaatttatgtggcttagatgtgttcaaagaagtgcaagttcctgtcgttccctct
gaagaacctttcaagagaccaagaccagtggaagctttctgtacatcactcatggattat
ttccgagacacgtgcaaatttgtggccatggagcgtgaagtaactcttgaccatctgttt
attgatgggactcttgttcaaggccaaattgaaaccaagagtgggaagaatagtgtaaaa
gtaatggaaaaggagctggtaacttgtaatctgcaagggaaggaaaaggcagcccttgaa
agaagtcaaatatttcaaatcccaggaggtaaaaaattagagactaaagtgattgtggtg
ctgggaaaaagcattttttttcagaagatctgccaggactggtccaatggagagttttct
ctttttgaatttgtcttttggtttgagtggaaacaaataagcatgcctgagaagcgatac
agcttgaaggatctgcttcttgagttttttgtaaaacctcaagagggaagcaatgaggtc
tttgaatacatactacaaaatcctgctaaagtccttctggtttttgatggttttgaaggg
ctacatgataatgagaattttcctcgttgctcagacagtgagcctgacaaagaggtgtgc
agtataaaggagctactttcaggcctcatccaaagaaagatactgaatggttgtacttta
ctgcttacaacaagacctaaagacaaagtgagccagtatgtgtccaaagtggataagact
attgaaatagtaggattctcccctcagcagagggaattatacataaccaaatattttgaa
ggattaccctactgtgataatgcactgaaattaatcaaagattgtcagtacctgttcagt
cattgttacagccctgttatgtgtagatttgtttgttttctctgtgagacagtacttgaa
atgggtgacaaaggccttccttcaactctcactaccctcttcctgaaatttgttcagcaa
aagctaacacctttgcaaggagaccttacacccatgcaaaatcaagagagtcttgctagg
ctagcccgtatagcctggtatcttggagaaaagcaccaaagtgccatgaaaagtgatctt
tttccttctaaggaagttaaagaatttgctctgaaatatggattcgtcctgccgtttgca
ttccccaaacattcagatactggagaagaagaatttgggaacacattctccaattttgcc
attcagaatttcttgggtgcgcttcatcttatgttagcagaagagatcaaggataaaagt
ctaacaaagtacctgtcttttccatccaagaagaaaaaaccttataactggttagactta
gtgcctcgatttttggctggattactgttcctccaggatgaccccgacttctgctccttt
tcaaacaaggatgtaaagcaatcaaccaaaaagcagaaaacactcttgaagtatattaga
aggctgcagataaatgacctctgtccagagaggttactggagcttttccattgtatttat
gaaacacaaaacaattatcttttgcagcatgtggccttaagactcaagccagatctgtct
tttctgggtgttgttcttacaccacctgatgtccatgtgctgcactctattttaaaaagg
tcaagaaaagagttttccttggatttgcaaaacagcagcattgacatgcaagggctaaaa
gacttgattggcctaaagaatgtggcatcgttcagggcttccctcagagatacaatcagg
ctctggaagtctttagaacaggcaaaagagtatgaactgctgagaatgtccacagagaaa
tttgttcttgatccctttaaggcaaagacaatgaaggacatcagtgacctttctgacctt
gtagagatgcagaagatgatgatcagttgtgtgcaagatgtatctggttggaacagctat
gaaattcctgccatcagaaacctcagaaaactagaatttgcgctgggtcaggtgtgtggc
cttcagggattcctaaaacttgtgggaattcttgcagcgtttccatcgcttcagcattta
gagtga
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