Struthio camelus australis (South African ostrich): 104149795
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Entry
104149795 CDS
T08512
Symbol
IGHMBP2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scam03009
]
104149795 (IGHMBP2)
03012 Translation factors [BR:
scam03012
]
104149795 (IGHMBP2)
Enzymes [BR:
scam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104149795 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
104149795 (IGHMBP2)
Ribosome biogenesis [BR:
scam03009
]
Eukaryotic type
Other ribosome biogenesis factors
104149795 (IGHMBP2)
Translation factors [BR:
scam03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104149795 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
AAA_19
Helicase_RecD
Viral_helicase1
ResIII
DEAD
nSTAND3
AAA_22
AAA_16
SLFN-g3_helicase
UvrD-helicase
Flavi_DEAD
AAA_25
IstB_IS21
AAA
DnaB_C
ABC_tran
NTPase_1
UvrD_C_2
PhoH
NPHP3_N
DAP3
RuvB_N
Motif
Other DBs
NCBI-GeneID:
104149795
NCBI-ProteinID:
XP_009681921
Ensembl:
ENSSCUG00000016224
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MRAWQENISLKELQRRGVCLLKLQAANQRTGLYGRLLVTFQSRKPSSDAELPSNSFGPGD
IVGLYESVGQGDPLSTGIITRVTSKSVTVAFEESRDGMLSLDREGSYRLLKLANDVTYKR
LKKALNALSQYHGGPASDLIDVLFFSSAPSAFSETKPLKLYNDSLDASQKDAISFSLAQR
ELAIIHGPPGTGKTTTIVEIILQAVQQGLKVLCCAPSNVAVDNLVERLASYKARILRLGH
PARLLEPIQQYALDAVLARGDSAQIVADIRKEIDQAFAKTKKAQDKGERSHFLSEIKALR
KELKEREETAMTAALTHASVVLATNTGASSDGPLKLLPENHFDLVVIDECAQALEASCWI
PLLKAPKCILAGDHKQLPPTIISHKAAAKGLSLSLMERLIERYGEKATRMLTVQYRMHRA
IMQWASSEMYGGRLTAHPAVAQHLLKDLPGVTATEETAIPLLLIDTAGCGLFELEEEDEQ
SKGNPGEVQLAGLHIQALVEAGVKARDVAVVAPYNLQVDMLREHLGHRYPELEIKSVDGF
QGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVSNQAFLKRLV
DYFGQHGEVRTAFEYLDNLVPENYSHEGRXASRPPPPPGPNPRPPPARKRNAAASQPAPP
KPEARSSPSHPGAESPGPKDAADKLQAMLGFLQRRLSPVNCGEDSRGKPCFQRGAKQTAA
QERVRRSSRLWAYLFPGLFPPYSAYSHLSEGCCSAPFRARRRCPFSLRQVHGCGEKAKGH
ARQRLSREGVLYAGGGAKDKALDPAKRAHLQRRLDKKLNELSSQRKSKKKDKEK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgagggcatggcaggaaaacatctcgctgaaggagctgcagcgcaggggcgtctgcttg
ctcaaactccaagctgccaaccaaagaactggcctgtacgggcggctgctcgtgacgttt
cagtccagaaaacccagttcggatgctgagctgccctctaacagttttgggcctggtgac
attgtgggtctttacgagtcagtcggccagggtgatccgctctccactggcatcataaca
cgcgtcacctccaaatcagtgactgttgcctttgaggaatctcgagatggcatgctgagc
ttggaccgagagggctcctaccgtctgctgaaactagccaacgacgtcacctacaagaga
ctgaaaaaggctttaaatgcactaagtcagtatcacggtggtccagcctctgatctgatc
gatgtcctcttcttctcttccgctccaagcgcattcagtgaaacaaagcctttaaagctc
tacaacgactccctagatgcatcgcagaaggatgccatctccttctcgctggcacagaga
gagctcgccatcatccatggcccacctggcacagggaagaccacaacaatagtagagatc
atcttgcaagcagtacagcaaggcctgaaggtcctgtgttgtgccccttccaatgttgca
gtggataacctggtggaaaggctggccagctacaaagcccgcattctgcgcctggggcac
ccagctcgcctcctggagcctatccaacagtacgccttggatgcggtcttggcccgcggt
gacagcgctcagatagtggcagatatcaggaaggagatcgaccaggcgttcgcaaaaacc
aaaaaggctcaagacaagggagaacggagccattttctaagcgagataaaggcactgaga
aaggagctgaaggaacgagaagaaactgccatgactgcagcccttacccatgccagcgtt
gtccttgctacaaatacaggtgcttcctctgatggtccactgaagctgcttcccgaaaat
cactttgatctggtggtgatagatgagtgcgctcaggccctcgaagccagctgctggata
cctctgctgaaagcaccaaagtgcatcctggctggcgatcacaagcagcttccccccacc
atcatctcgcacaaggctgctgccaagggcctgtcactcagcctgatggagcgtctcata
gagaggtacggggagaaggctacgaggatgctgacggtgcagtaccgcatgcaccgggcc
atcatgcagtgggcttcctcggagatgtacggcggccggcttaccgcccacccggcggta
gcccagcatttgctcaaggacctgccgggcgtcacggctacggaagagactgcgattccc
ttattgctgatagacaccgccggctgcggcctgtttgagctggaagaggaagacgagcag
tccaaagggaacccaggcgaggtgcagctggccgggttgcacatccaagctttggtggaa
gccggcgtgaaggcccgagacgttgccgttgtagctccctacaacctccaggtggacatg
ctaagagagcaccttggccacaggtacccggagctggaaattaaatcagttgatggtttc
cagggaagagagaaagaggcggtggtcctctcgttcgtgagatccaacaggaagggcgaa
gtgggctttctcgccgaagaccggcggatcaacgtagcggtgacccgtgcccggcgccac
gtggctgttatctgcgactcccgcacggtcagcaaccaagcctttctgaagcgcctcgtg
gattacttcggccagcacggggaggtgcgcacggccttcgagtacctcgacaacctcgtg
ccggagaactactctcacgagggccgcnnagcgagccggccccccccccccccgggcccc
aacccgcggccgcctccggcgaggaaacgcaacgcagcggcctcccaaccagctcctcca
aagccagaagcacgttcctccccgagccaccctggagcagagagcccggggccgaaagat
gccgcagacaaactccaggccatgctggggttcctgcagcgtcgcctctccccggtgaac
tgcggcgaggattcccgcgggaaaccatgttttcaacggggcgcaaagcagacggctgct
caggaacgggtaaggaggagctccaggctctgggcctacttattcccaggcttattccca
ccttattcggcttattcccacctaagcgagggctgctgctcagccccgtttcgcgcccga
cgccgctgtcccttctctctccggcaggttcacgggtgcggggagaaggccaagggccac
gcgcggcagaggctcagcagggaaggggtgctctacgccggcggcggcgccaaggacaag
gccctggacccagccaagagagcccatctgcagaggcgcctggacaaaaagcttaacgag
ctgagcagccagcgaaagagcaagaagaaagacaaagagaaatga
DBGET
integrated database retrieval system
