Struthio camelus australis (South African ostrich): 104149846
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Entry
104149846 CDS
T08512
Name
(RefSeq) LOW QUALITY PROTEIN: probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104149846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scam03021
]
104149846
03036 Chromosome and associated proteins [BR:
scam03036
]
104149846
Transcription machinery [BR:
scam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104149846
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
104149846
Chromatin remodeling factors
BAF complex
104149846
PBAF complex
104149846
GBAF(ncBAF) complex
104149846
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HSA
BRK
QLQ
ResIII
DEAD
Helicase_C
DUF2009
Motif
Other DBs
NCBI-GeneID:
104149846
NCBI-ProteinID:
XP_009682025
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
YMSPHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPMIPGDPQVMSQPNRGPSPFSPVQL
HQLRAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQIPAAYSRQSGIGSHAINGPT
AGPGPAKKGMPGHTATMTPKPWTEGQALDMSVPNTPQKLSVPPPSGRPSPAPPAAQPSAA
MPGPSVPTQPAPGQPSSIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQE
LENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR
QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAV
ATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANL
TNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGMGSGLGPDGEPIDESSQMSDLPVKVTHT
ETGKVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDDEESSRLEADEK
ILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYNARGSQSYYTVAHAITERVEKQSSLL
INGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLII
VPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHI
LAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLL
PTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLP
EKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHP
YMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLM
TIMEDYFAFRNFLYLRLDGKLNENKR
NT seq
2963 nt
NT seq
+upstream
nt +downstream
nt
gctatatgtctccacacccatctccactgggagcaccagaacatgtgtccagtccgatgt
ctggaggaggtccaactccaccccagatgactccaagtcagccaggacccatgataccag
gagatccacaagttatgagtcaacccaacagaggtccttcccctttcagccctgtacagc
tgcatcagctccgagctcagattctagcatacaaaatgttagctagaggtcagcctttac
cagaaaacctccaacttgctgttcaaggaaagaggaccctgcctggcattcagcaacaac
agattcctgctgcctacagcagacaatcaggtattgggtcacatgcaataaatggtccta
cagctgggccaggaccagctaaaaaaggaatgcctggacacactgctaccatgaccccta
aaccttggacagaaggccaagccctagatatgagtgttcccaatacaccacaaaagctct
ctgtaccacctcctagtgggaggccttctcctgctccccctgctgcccagccctctgcag
ccatgcctgggccttctgtaccaacacagcctgcacctggacagccttcatctattgtgc
aactgcagcaaaaacaaaatcgtatcagtcctatccagaaaccacaaggattggatccag
ttgaaatactccaggaacgtgaatataggcttcaggctcgaattgctcacagaatccagg
aactggagaacttgcctggctctttgcctcctgatctgcgaaccaaagctacagtagagt
tgaaggcacttaggttactgaatttccagcgccagctaaggcaagaggtagtagcctgca
tgcgtcgtgacacaacactggagacagcactgaactccaaagcctacaagagaagcaagc
gtcagactctgagggaggcccgtatgacagaaaaacttgagaaacagcagaagatagaac
aagagaggaaacgtagacagaaacatcaggaatatctgaacagcatattgcagcatgcta
aagattttaaagagtaccatcggtcagtggctgggaaaattcagaaactttctaaagccg
tggcaacttggcatgccaacactgagcgtgagcagaaaaaggaaacagagagaattgaga
aagaaagaatgagaaggctaatggctgaagatgaagaaggctaccgtaagttgattgacc
aaaagaaagatagacgcctggcttacctattgcagcagacagatgagtatgtggctaatc
tgactaatctggtatgggagcacaaacaggcacaagcagccaaagagaagaaaaagagga
ggagaagaaagaagaaggcagaagaaaatgcagaaggaatgggatctggtcttggtcccg
atggagagcccatagatgagagcagtcagatgagtgaccttccagtcaaagtgactcaca
ctgaaacaggcaaagttcttcttggaccagaagcaccaaaagcaagtcagctggatgcct
ggctggaaatgaaccctggctatgaagttgctcctaggtcagacagtgaagatgaaagtg
gctctgaatatgaggaggaggatgatgatgaagaatcaagcaggttagaagcagatgaga
agatacttctggatcctaacagcgaggaagtttctgagaaagatgctaaacaaatcattg
agacagccaaacaagatgtggatgatgaatacagtatgcagtataatgctagagggtctc
aatcatactacactgttgctcatgcaatcacggagagggtggagaagcagtcttctcttc
ttattaatggtacactaaaacattatcagctccagggcctggaatggatggtttcactct
ataataacaatttgaatggaattttagctgatgaaatgggactaggaaaaaccatacaga
ctattgcactcatcacttatctgatggagcacaaaagactaaatggcccctatctcatca
ttgttcccctttcgactttatccaactggacatacgaatttgacaaatgggctccttctg
tggtgaaaatatcttacaaggggacacctgccatgcgtcgctcacttgttcctcagcttc
gaagtggaaaatttaatgttcttttaactacttatgaatacataataaaggacaaacata
ttcttgctaagattcgatggaaatacatgatagtagatgaaggccatcgaatgaagaacc
atcactgcaagctgactcaggtcttgaacactcactatgtggcccctaggcggatactgt
tgactgggactccactgcagaacaaattgcctgaactttgggctcttctcaacttcctcc
tccctaccattttcaagagctgcagcacctttgaacaatggttcaacgctccatttgcca
tgactggagaaagggtggacttaaatgaggaagagactatcctgatcatccgccgtctcc
acaaagtgctccgacccttcttgctgaggagactgaaaaaagaagttgaatcgcagctgc
cagaaaaggttgaatatgtaatcaaatgtgacatgtcagctcttcagaagatcctgtacc
gccacatgcaagccaagggaatccttctcacagatggttctgagaaagataagaagggaa
aaggtggggcaaaaactcttatgaacacaatcatgcaattgagaaagatatgcaatcacc
catatatgtttcaacatattgaggagtcctttgctgaacatttgggctactcaaatggtg
tcatcaatggagctgagctttatcgggcctcagggaagtttgaactacttgatcgtattt
tacctaagttgcgagccactaaccatcgtgtgcttcttttctgtcaaatgacatcactca
tgaccattatggaagactactttgcatttcgaaatttcctttacctgcgtctcgacggta
agctaaatgagaacaaaagataa
DBGET
integrated database retrieval system
