Struthio camelus australis (South African ostrich): 104149852
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Entry
104149852 CDS
T08512
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03020
RNA polymerase
scam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104149852 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
104149852 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scam03021
]
104149852 (POLR2B)
03400 DNA repair and recombination proteins [BR:
scam03400
]
104149852 (POLR2B)
Enzymes [BR:
scam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104149852 (POLR2B)
Transcription machinery [BR:
scam03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104149852 (POLR2B)
DNA repair and recombination proteins [BR:
scam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104149852 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
104149852
NCBI-ProteinID:
XP_009682030
Ensembl:
ENSSCUG00000016970
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDL
QAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVD
ITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFII
NGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGA
KKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDE
AFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGY
MVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGK
DFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNS
PIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEE
WSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDI
REREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDT
LEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSA
MGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTG
YNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGMRHAIYDK
LDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSETGIVDQV
MVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIII
NPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEV
LYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFG
EMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQVG
ASFISQCFSLWVRGNVMQVNRTMGKQMVKETAEKLPG
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatgatgaagatgatgatgaaatcactcctgacttgtggcaagaagcatgctgg
attgttattagctcctactttgatgagaaaggcctagtcaggcagcagctggattctttt
gatgagtttattcagatgtctgtgcagagaattgttgaagatgctccaccaattgatttg
caagctgaagcccagcatgccacaggagaagtggaagagccaccccggtatctgctgaag
tttgaacaaatctatctctccaaaccaacgcattgggaaagagatggtgcaccgtcaccc
atgatgcccaatgaagccaggctgagaaacctcacgtattcagcccctctgtacgtggat
ataactaaaaccgttattaaagaaggggaagaccagttacagacacagcatcagaaaact
tttataggaaaaatccctattatgttacgctcaacatactgcttattgaatggcttaact
gaccgtgatctttgtgaactgaatgaatgccctcttgaccctggcggctactttatcatt
aatggatcagaaaaggttctgattgctcaggagaaaatggctacgaacacagtgtatgtg
tttgcaaagaaagattcaaaatatgcctacacgggagagtgtagatcttgtctggaaaat
tcctctcgaccaacaagtactatatgggttagcatgctggccagaggtgggcagggtgca
aagaagagcgctattggccagcgcattgtagcaactttaccgtatatcaaacaagaagtg
cccatcataattgtctttcgtgcactaggctttgtgtccgacagggacattttagagcac
atcatttatgattttgaagatccagaaatgatggaaatggtcaaaccttctttggatgaa
gcatttgtcatccaggaacaaaatgttgctctgaacttcattggatcaagaggtgcaaag
ccaggtgttaccaaagagaaaagaatcaagtatgctaaagaagtcttgcagaaagaaatg
ctcccacatgttggtgtcagtgacttctgtgagaccaaaaaggcctattttcttgggtat
atggttcatagactgttgctggcagccctgggaagaagagagcttgatgacagagatcat
tatggcaacaaaagactggatcttgctgggccactgttagctttcctgttccgaggaatg
tttaagaatttgctgaaggaagtgaggatatatgcacaaaagtttattgacagagggaaa
gatttcaacttggaactggcaattaaaacaagaattatttcagatggtttgaagtattca
ttggcaactggaaactggggtgatcagaagaaagctcatcaggccagagcaggagtatct
caggtgttaaaccgtctgacttttgcatctactctgtcccatctgagacgcctgaattct
ccaattggtagagatggtaaactagcaaagcccagacagttgcacaatacactgtgggga
atggtttgccctgctgagactccagagggtcatgcagttggacttgtgaagaacttagcc
ttgatggcttacatttctgtggggtctcagccatccccaatcttggaattcttggaagaa
tggagtatggaaaacctagaagaaatatctccagcagcaatagctgatgctaccaagatt
tttgttaatggctgctgggtgggaatacacaaagatccagaacaacttatgaatacacta
agaaaactgcgtcgtcagatggacatcattgtgtcagaggtctcaatgattagggatatt
cgggagcgagaaatccgcatctatacagatgcaggcagaatttgtcgaccccttttaatt
gtggaaaaacagaagttgctgttgaaaaaaaggcatattgaccaactgaaggagcgagag
tataacaattacagttggcaggatcttgtggccagtggggtagtggagtatattgatacc
ctggaagaagagactgtgatgctggcaatgactccagatgacttgcaagagaaaggtgtt
gcatactgttcaacgtacacacactgtgagattcacccatctatgatcctgggagtatgt
gcatctattatcccttttcctgatcacaaccagtctcctaggaacacataccaatctgct
atgggtaaacaggctatgggagtttacattacaaactttcacgttcgtatggatacactg
gcacatgtgctgtattatcctcagaagccccttgtaacaacacgttctatggagtacttg
cgatttagagagttaccagcaggtatcaactccattgtagccatcgcatcgtacacaggc
tataaccaggaagactctgtcatcatgaaccgttctgctgtagatagaggctttttcaga
tctgtgttctatcgctcatacaaagagcaagagtccaaaaaagggtatgaccaagaggaa
gtttttgaaaagcctacccgtgaaacttgccaaggcatgagacatgctatctatgacaaa
cttgatgatgatggtttgatagcgcctggggtacgtgtgtccggggatgatgtcattatt
ggcaaaacggtaactctgccagaaaacgaagatgaactggaaagcactaacagacgtttc
acaaagagagactgcagcacttttctgcgaactagtgagactggtattgtagatcaggtc
atggtaacccttaaccaggaaggatacaagttctgcaaaattagggtgcgctctgtaaga
atcccacaaattggagataaatttgccagcagacatggtcagaagggaacctgtggaatc
cagtacaggcaagaggatatgccattcacctgtgaaggcatcacacctgatataatcatc
aatccccatgccatcccttcccgcatgaccattggtcacttgattgaatgtcttcagggg
aaggtatcggcaaacaagggagaaattggtgatgctacgccttttaatgatgctgtcaat
gtgcagaagatttccaatcttttatcagattatggctatcatctaagaggaaatgaggtt
ctctacaatggatttactggccgaaaaatcacatcacagattttcatcggtcctacatat
tatcagcggttgaagcacatggtagatgacaaaattcattctcgtgcaagagggccaatc
cagatccttaacagacagcccatggaaggtagatctcgcgatggtggccttcgttttgga
gaaatggaacgagattgccagattgctcatggagcagcccagttcttgagagagagattg
tttgaagcttcagacccataccaagtccatgtctgtaacctctgtggaatcatggcaatt
gcaaacacaaggactcacacctatgaatgccggggatgccgtaataaaactcaggtaggt
gcgagtttcatcagccagtgtttctctctgtgggtaagaggaaatgtcatgcaggtgaac
aggacgatggggaagcagatggttaaagaaacagcagaaaaattgccaggttaa
DBGET
integrated database retrieval system
