Struthio camelus australis (South African ostrich): 104149919
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Entry
104149919 CDS
T08512
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scam03009
]
104149919 (DDX10)
Enzymes [BR:
scam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104149919 (DDX10)
Ribosome biogenesis [BR:
scam03009
]
Eukaryotic type
90S particles
Helicases
104149919 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
104149919
NCBI-ProteinID:
XP_009682113
Ensembl:
ENSSCUG00000017165
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MNWSKFRGGPPRWAGLEHLPYVNEIQRFSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLA
LQGKDVLGAAKTGSGKTLAFVVPALEILYRHQWTSADGLGVLIISPTRELAYQTFKVLRK
VGKNHDFSAGLIIGGKDLKEESERIHHINMLICTPGRLLQHMDETSYFYASDLQMLILDE
ADRILDMGFAETMNAIIENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFS
TPATLDQNYIVCELQQKVNMLYSFLRSHLKKKSIIFFASCKEVQYLFRVFCKLQPGVPVL
ALHGKQHQMKRMEVYNCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRV
GRTARYKEGGEALLVLLPSEEKGMVEQLAQRKVPVNEIKINPEKLTDIQKRMQAFLAQDQ
ELKERAQRCFVSYLRSIYLMKNKEVFDVFKLPLAEYALSLGLAVAPRVRFLQKAQKQLSV
NEIAEETDHLKETKQNKNVSSSISKEVEKYRTNFSGEVSVDKTNEEDGRKETEEYPSSSG
GTDDGESEEELKEVFEEEEEKEVPVLSRVPNADSIPFFEDDDDDDDDRDLDLLTVKRRNV
FGIEARDNPALVGDPKEMCCFAVEVTEELADGRPGALTQRHVRPSNSSWCAATSAYALIA
SCTEVNASNSKVKKKATKTQEAKKILKKKFKVNTKIVFTEDGELVQQWPPVQKSSLAKAD
EEDDASGINLDKVKEILREEDKFDKEEYRKKIKEKHREKRLKEKAARREARNQNAEDGVE
TVAFLGHSGSEEEFDPSTLPDPDKYKDSDQERDSESEDSYGEPEERSGREKRSCSNSSAA
EEPPLKRKKAKLSHEEDPFMPLDTGLSLAEDEELVLHLLNSNS
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaactggagcaagttcaggggagggccaccgagatgggcagggctggagcacttgccc
tatgtaaatgaaattcaaagattttcagattttccactgtcaaagaaaactctaaaagga
ttgcaagaagctcagtatcgcatggtaactgagattcagaggcaaaccataggtttggct
ttacaaggtaaagatgttcttggagctgcaaagactggatcaggcaaaactttggctttt
gttgtcccggctttggaaatcttgtatcgccatcagtggacttcagcagatggattggga
gttttgataatatcgcctacccgggaactggcatatcaaacctttaaagttctgcgtaaa
gtgggaaaaaatcatgacttctcagctggccttataattggaggaaaggatctgaaagaa
gagtctgagagaatccaccacatcaatatgctaatttgcactccaggacggcttctgcag
cacatggatgaaacttcatatttctatgcatctgatctacaaatgttgattcttgatgaa
gctgatagaattctagacatggggtttgctgagacaatgaatgcaatcatagaaaatcta
cctaagaaacgccagaccttacttttttcagcaacacaaacgaaatcggtgaaggatctt
gcacggctgagtttgaaagatccagaatatgtttgggttcatgagaaagccaaattcagt
accccggcaactttggaccagaactatattgtttgtgagcttcaacaaaaagtaaacatg
ttatactctttcctgagaagtcacctgaaaaagaagagtattatcttttttgcaagctgt
aaagaggtccagtatttgttcagagtgttctgtaagcttcaacccggtgtgcctgttttg
gcactccatggcaaacagcatcagatgaagagaatggaagtctacaattgttttgttcgg
aaaaaggcagcagtactttttgctacagatatcgcagctcgtggcctcgattttcccgca
gtgaactgggtcattcagtttgattgtccagaagatgcaaatacgtacatccacagagtg
ggaagaacagccagatacaaagaaggtggtgaagctttgttagtattgcttccttcagaa
gaaaaaggcatggtggaacaactggcacagaggaaagtacctgtcaatgaaatcaaaatc
aaccctgaaaaacttacagacattcaaaagaggatgcaggcttttttagcccaagatcag
gagttaaaagagagagctcaacggtgttttgtatcttacttgcgttcaatttacttaatg
aagaataaggaagtatttgatgttttcaaattgcctctagcagaatatgccctatcactt
ggtcttgcggtggcaccccgtgtgagatttcttcagaaagctcagaaacaattatctgtg
aatgagatagctgaagagacagatcacttgaaggagacaaagcaaaataaaaatgtcagc
tcctcaataagcaaagaagtagagaaatacagaactaatttcagtggagaggtatctgtt
gacaaaacaaatgaagaggatggaaggaaagaaaccgaggaatatccttcttccagtgga
ggtactgatgatggtgagtctgaggaggaattgaaagaggtatttgaggaggaagaggag
aaggaagttccagtgttaagcagggttccaaatgcagactccataccgttctttgaagat
gatgacgacgacgatgatgatagagatcttgatttgctgacagtgaaacgacggaatgtt
tttggtatcgaagctagagataatccagcactggttggggacccaaaggagatgtgctgc
ttcgcagtggaggttactgaagagttagctgatgggaggcccggagcgctcacccagcgg
cacgtccgtccgagtaactcaagctggtgtgccgcaacgtctgcgtacgccctcatcgca
agctgcacggaagtgaatgcctcaaactcaaaggtgaagaaaaaagcaactaaaacacaa
gaagccaaaaaaatcttaaagaagaaatttaaagtcaacacaaaaatagtctttactgaa
gacggagagttagtgcagcagtggccgcctgtgcaaaaatccagtttggcaaaagcagat
gaggaagatgacgccagtggtattaacttagataaagtgaaagagatactgcgggaagaa
gacaaatttgacaaagaagaatacaggaagaagattaaagaaaaacacagggagaaaagg
ctaaaagaaaaagcagcaaggagagaagccaggaaccaaaatgcagaggatggagtggaa
acagtggcctttcttggtcacagtggaagtgaagaagaatttgatccaagtactcttcca
gatcctgataaatacaaagattctgaccaggagcgtgattcagaaagcgaagacagctac
ggtgaacctgaggagaggagtggaagagagaaaagaagctgtagtaacagcagtgcagca
gaagagccgccactgaaaagaaagaaggctaaattgagccatgaggaagacccctttatg
ccattagatactgggctttccctggcagaggatgaagagcttgtgctacatctgctcaac
agtaatagctaa
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