Struthio camelus australis (South African ostrich): 104150434
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Entry
104150434 CDS
T08512
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04140
Autophagy - animal
scam04142
Lysosome biogenesis
scam04145
Phagocytosis
scam04148
Efferocytosis
scam05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
104150434 (VPS39)
04142 Lysosome biogenesis
104150434 (VPS39)
04140 Autophagy - animal
104150434 (VPS39)
04148 Efferocytosis
104150434 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104150434 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scam04131
]
104150434 (VPS39)
Membrane trafficking [BR:
scam04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
104150434 (VPS39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
VPS18_solenoid_2nd
Hira
Lgl_C
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
104150434
NCBI-ProteinID:
XP_009682983
Ensembl:
ENSSCUG00000017695
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MVNKGYVCKGVAGEVCYFYSFKPEEANAWRVICSLVVPVSFCPPLHQLAFPCAPVSRQQR
APVPASLREGEIILLKPDPFSGRTPRRLFRRVLPNLNVVVRARLCTREDASIVCFCEEWL
LVGTKQGHLLLYRIKKDIGCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYV
HDLLTFQQITTVSKAKGASLFTCDLQDSGTGEEVLRMCVAVRKKLQLYFWKDREFHELQG
DLSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADGKVA
VGQDDLTVVLNEEGICTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSI
ELQRPRFITSGGTNIIYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLAEMKDDSDS
EKRQQIHYIKNLFAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPN
PLPGLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQI
IDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKAL
QVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLVFSYSIWVLRDFPEDGLKIFTEDLPE
VEALPRDKVLSFLIENFKSLSIPYLEHIIHVWEETGADFHNCLIQLYCEKVQGLMKEYLS
SFPADKTPVPAGEEGGDLGDYRKKLLLFLEKSSCYEPDRLISDFPFDGLLEERALLLGRM
GKHEQALFIYVHILKDTKMAENYCHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGPIKM
EVLEPQANLQAALQVLELHHSELDTTKAINLLPANTQISEIRIFLEKVLEENAQKKRFNQ
VVKNLLHAEFLRVQEERILHQQVKCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYFCSK
EVNAMDT
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacaaagggtacgtgtgcaaaggcgttgcgggcgaggtatgctacttctactcc
ttcaaaccggaagaggccaatgcctggcgtgtaatttgcagcctggttgtgccggtcagc
ttctgtcctcctctgcaccagctggctttcccgtgcgctccagtctcgcgtcagcagcgg
gctccggtaccagcctcactacgagaaggcgaaattatcctcttaaagcctgaccccttc
tctggccgtacgccgaggcgactcttccgtcgggtgctgccaaacctaaacgtggtcgtt
cgcgctagactctgtactagagaagatgcgagcattgtttgtttctgtgaggaatggctc
ctcgttggtaccaaacaagggcatcttctcctttacaggatcaagaaagatataggttgc
aataggtttgaggtgacgctagagaaatccaacaagaacttctccaaaaagattcagcag
attcatgttgtttcccaatttaaaattctggtcagtctgttagagaataacatttatgtc
catgacctgttgacatttcaacaaatcactacagtttccaaggcaaaaggtgcatccctc
ttcacttgtgatcttcaggattcaggtacaggggaagaggtgctgagaatgtgcgtggca
gtacggaagaagctacagctttatttttggaaggacagagaatttcatgaactacagggg
gacctcagcgtacctgatgtacccaagtctatggcctggtgtgaaaactccatctgtgtt
ggtttcaagagggactattatctgatacgggtggatggaaaaggatctatcaaagaactg
tttcctacaggcaagcagctagaaccgttggtagcccctgtagcagatggaaaagtggca
gttggccaagatgatctgactgtagtgctaaatgaagaaggaatctgtacccagaagtgt
gccttgaattggacagatattcctatagccatggaacaccagcctccttacattattgct
gttctgccaaggtatgtggagattcgcacttttgaacctcggttgctggtacagagcatt
gagctgcagagaccacgcttcatcacctctggaggcacaaatattatatatgtggcaagt
aatcactttgtttggcggctcattccagtctccatagcaacacagatccagcaacttcta
caagacaagcagtttgagttggcgttgcagttggcagaaatgaaagatgattcagacagt
gagaagcgacaacaaattcattacattaagaacctctttgccttcaacctcttctgccag
aagcgttttgatgaatcgatgcaagtttttgccaagcttggtacagatcccactcatgtg
atgggtctgtaccctgacctcctgccgacagattacaggaaacagctacagtatcccaac
cccctgccagggctctctggggcagagctggagaaggcacatttagctctcatagactac
ctaactcaaaaaagaagtcagctggtaaagaagctaaatgattctgaccatcagtccagt
acctcacccctcatggaaggaacgcccacgatcaaatccaaaaagaagctgctacaaatc
attgataccaccctgttaaagtgttatctccatactaacgtagcgctggtggcaccgttg
ctacgtctggagaacaatcactgccatattgaagagagtgagcacgtactaaagaaggca
cacaaatatagtgagctgataatactgtatgagaagaaaggtctgcatgagaaagcactg
caggtactggtggatcagtcgaagaaagccaactcacctttgaagggtcatgagaggaca
gtgcagtatctgcagcatttgggcacagagaacttgcacttggtattttcctactccatc
tgggtgcttagagattttccagaagatgggctgaagatatttacagaagacctccctgaa
gtggaagctttgccacgagacaaagtgctcagtttcttgatagaaaattttaagagcttg
tctattccttatctggaacacatcattcatgtctgggaagaaaccggtgcagattttcac
aactgtctcatccaactgtactgtgagaaggtgcaaggcttaatgaaagaatatctcagt
tctttccctgcagacaaaacgccagtgcccgctggggaggaaggaggagacttgggagat
tatcggaaaaagctgcttcttttccttgaaaagtctagctgctatgaacctgatcgacta
attagtgacttcccctttgatggtctcctagaagaacgtgctctgctcctgggtcgtatg
ggaaagcatgagcaagctctctttatttatgttcatattttgaaggataccaaaatggct
gaaaactactgccataaacattatgacagaaacaaagatggcaacaaagatgtctatctg
tctctgcttcggatgtatctctccccacctagcgttcattgcctggggccaatcaagatg
gaagtgctggagcctcaagccaatctgcaggctgctctgcaggttttggagctgcatcac
agcgaactggataccaccaaggcaataaacctacttccagcgaacacacagattagtgag
attcgaatcttcctagagaaagtccttgaagaaaatgcccagaagaaaagatttaatcaa
gtagtcaagaatcttcttcatgctgagtttctgagggtccaagaggagcggatcttgcat
cagcaagtgaagtgcattattaccgaggagaaggtgtgcactgtttgtaaaaagaagatt
ggtaatagtgcatttgcgcgataccctaatgcaatagttgtgcattatttctgctccaaa
gaagtcaacgcgatggacacctga
DBGET
integrated database retrieval system
