Struthio camelus australis (South African ostrich): 104150459
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Entry
104150459 CDS
T08512
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scam03000
]
104150459 (SOX6)
Transcription factors [BR:
scam03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104150459 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104150459
NCBI-ProteinID:
XP_009683018
Ensembl:
ENSSCUG00000017990
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MDIPGVILSCIIQIRMSSKQATSPFACAADGEETMTQDLASRDKEEGNSDQHATSHLPLH
NVMHNKPHSEELSTLVTTIQQDAEWDGVISAQHRMESESNKLCSLYSFRNTSTSPHKPDE
GGRDRSELMTGVNFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKE
KMEKLNTSDLLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQ
RQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAA
AAAQQGFLFPPGITYKPGENYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGA
KMPSTPQPPNTTGALSPTGMKNEKRGTSPVTQVKDEAAQPLNLSARPKTAEPVKSPTSPT
QNLFPASKSSPVTVTSKSGIPSPLGGTLGRATSLDILSSLNSPALFGDQDTVMKAIQEAR
KMREQIQREQQQQQQPHGVDGKLPSMNNMGLNNCRNEKERSRFENLGPQLTGKPNEDGKL
GPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDSRGRASSEPHIKR
PMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLE
KYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVY
PGAITMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYGMKTDSGSLAGNEMINGEDEIEM
YEDYEDDPKSDYSSENEAHEAVSAN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggacatcccaggggttattctctcttgcatcatccaaataagaatgtcttccaagcag
gctacctctccatttgcatgtgcagctgatggagaggaaacaatgacccaggacttagca
tcacgagacaaggaggagggcaacagtgatcagcatgcgacctctcatctgcctctacat
aatgtaatgcacaacaaacctcactctgaggagctatcaactctggtcacaaccatccaa
caagatgctgaatgggatggggtcatctcagcccaacacagaatggagtcagagagtaat
aagttatgttccctatattccttccgaaatacctctacctcaccacacaagcccgacgaa
ggaggtcgtgaccgcagtgagctaatgacgggtgttaattttggaacgccagaacgccgc
aaaggaagccttgctgatgtggtggacacactgaagcagaagaaactagaagaaatgacc
aggactgagcaagaggattcatcctgcatggaaaagctactttctaaagactggaaggag
aagatggaaaaattaaacacaagtgatctccttggagaaattaaaggtacaccagaaagc
ctggcagaaaaagagcgacagctctctaccatgatcacccagctgatcagcttacgggag
cagctcctggctgcccacgatgagcagaaaaagctggcagcttcacaaattgaaaaacaa
cggcagcaaatggaccttgctcgccaacagcaagaacagattgcaagacaacagcagcaa
cttctgcaacagcagcacaaaatcaatctactgcagcagcaaattcagcaggttcagggt
cacatgcctccgctcatgatcccaatttttccacacgaccagcggacattggcagcggct
gctgcagcccagcagggattcctcttccccccaggaataacttacaagccaggtgagaac
tacccggtgcagttcattccttctacgatggcagctgccgctgcttctggactcagccct
ctgcagctccagcaactgtatgcagctcagctggctagcatgcaagtttctcctggagcc
aagatgccgtctactccgcagccaccaaatacgacaggggcgctctcacccactggcatg
aaaaatgagaagagagggaccagcccggtaactcaagttaaggatgaagcagcccagccg
ctgaatctttcagcccgacccaagacagctgaacctgtcaaatccccaacatctccaaca
cagaacctctttccagctagtaaaagcagtccagtgactgtgacaagtaagagcggcatc
cccagccccctcggtggaactctgggaagagcaacctctttagatatcctttccagtctt
aactcacctgccctatttggggaccaggacacagtaatgaaagccattcaggaggctcga
aaaatgagagagcagatccaaagggagcagcagcagcaacagcagccgcatggtgttgat
ggaaaattgccctccatgaataacatgggtctaaacaactgcaggaatgaaaaggaaaga
tcaaggtttgaaaatttaggcccacaattaacagggaaacccaatgaagatggaaaactg
ggccctggtgtcattgatcttacaaggccagaagatgcagaaggaagtaaagcaatgaat
ggctctgcagctaaactacagcagtattattgttggccaacaggaggtgccactgtggct
gaagctcgggtctacagggattcgcggggccgagccagtagtgaaccgcacatcaaacga
ccaatgaatgctttcatggtttgggcaaaggacgaacgtcgaaaaattctccaagctttc
cctgacatgcacaactccaacattagcaaaatcctaggatctcgctggaagtccatgtcg
aatcaagagaaacaaccttactatgaagagcaggcacggctaagtaaaatccacctagaa
aagtacccgaattacaaatataaaccccgaccaaaacgtacctgcattgtcgatggaaag
aaattgcgtattggtgaatacaaacaactgatgaggtctcgaagacaggagatgaggcag
ttttttaccgtaggacaacagcctcaaattccaatcaccacaggaacgggtgttgtctac
cctggtgctattaccatggcaactaccacgccatcacctcagatgacatccgactgctct
agcacctctgccagccctgagcccagcatccctgtcattcagagcacttacggtatgaag
acggacagcggaagccttgctggaaatgaaatgataaatggagaggatgaaatagaaatg
tacgaggactatgaggatgatcccaaatcagactatagcagtgaaaatgaagcccacgag
gcagtcagtgccaactga
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