Struthio camelus australis (South African ostrich): 104150508
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Entry
104150508 CDS
T08512
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scam03021
]
104150508 (CHD1)
03036 Chromosome and associated proteins [BR:
scam03036
]
104150508 (CHD1)
Transcription machinery [BR:
scam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104150508 (CHD1)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104150508 (CHD1)
SLIK complex
104150508 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
104150508
NCBI-ProteinID:
XP_009683085
Ensembl:
ENSSCUG00000002773
UniProt:
A0A093GXE2
LinkDB
All DBs
Position
Unknown
AA seq
1812 aa
AA seq
DB search
MNGHSDEESVRNSSGESSRSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSREKKQVQAKPPKVDGSEFWKSSPSILAVQRSAVLKKQQQQQQKAPSSDSGS
EEDSSSSEDSADDSSSETKKKKHKDEDWQMSGSGSVSGTGSDSESEEDREKSSCEESESD
YEPKNKVKSRKPPSRIKPKSGKKSTGQKKRQLDSSDDDDDDDEDDDDYDKRGSRRQATVN
VSYKEAEETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRIGRKGATGAATTIYAVEA
DGDPNAGFEKSKEPGEVQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQET
KRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYS
ECSWEDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESL
ELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL
STLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKD
KSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF
IMPEKFSSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS
ALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEA
LQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIK
GELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH
RIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTP
FNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQF
KVANFSNMDEDDIELEPERNSRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQ
ISFNGSEGRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYK
KFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGPERAGGRLGKVKG
PTFRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVVPCHTKAAHFDIDWGKEDDS
NLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLAR
KEAQRLAGAGNSKRRKTRTKKNKVLKAAKVKEEIKSDSSPPPSEKSDEDEDEDNKDEIVS
VKHPHKKIKAEKENEEKPEPDIGIKKEAEEKRETKEKENKRDLKREKKEKEDKKELKEKD
IKEKRENKVKESTQKEKEVKEEKVNETKSENKEKTKKVPLSDTPVHITATSEPVPISEES
EELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYT
NPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRN
PDVERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKSDSRKRPYSAFSNGKD
HRDWDHYKQDSRYYSDSKHRKLDDHRSRDHRSNLEGSLKDSRPHSDHRSHSDHRIHSDHR
STSEYSHHKSSRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHK
STPEHSWSSRKT
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcatagtgatgaagaaagtgtaagaaacagtagtggcgagtcaagccgatca
gatgatgattctgggtcagcatcgggttctggatctggttcaagctctggaagcagtagt
gatggaagtagcagccagtcaggtagcagtgactctgactctgggtcagagtcaggcagt
caatcagagtcagagtctgacacatctagagagaagaaacaagttcaagctaagccacca
aaagttgatggatctgagttttggaagtccagtccaagtatacttgctgtgcagagatca
gcagtgctcaagaagcagcagcaacagcaacaaaaggcaccttcatcagacagtggttca
gaagaggactcatctagcagtgaagattctgcagatgactcatccagtgaaaccaagaag
aaaaaacataaagatgaagactggcaaatgtctgggtcagggtcagtatcaggaactggc
tccgactctgaatcagaggaagatagagagaaaagcagttgtgaagagagtgaatctgac
tatgagccaaaaaacaaggtcaaaagccggaaacctccaagcagaattaagccaaaaagc
ggcaaaaagagtacaggacagaaaaagaggcagctcgattcatccgacgatgacgacgac
gacgacgaggacgatgatgattatgataagagaggatctcgtcgccaggcaacagtcaat
gttagttacaaagaagctgaagaaactaagacagattctgatgacttgctggaagtctgt
ggagaagatgtcccacaacctgaagaagatgaatttgaaactatagagaagtttatggac
agtcgaatcggccgaaaaggagccactggtgctgcaaccactatctatgcagttgaggca
gatggtgatccaaatgctgggttcgaaaagtcaaaggagccaggagaagtacaatatctt
attaaatggaaaggctggtcccacatccataatacttgggaaactgaggagactttgaag
caacaaaatgttaaaggaatgaagaaactggacaattataagaaaaaggatcaggaaaca
aaacgatggctgaaaaatgcttctccagaagatgtggaatattataactgccagcaggaa
cttacagatgatctacataaacaatatcaaatagtggaaagaataattgctcattcaaat
cagaaatcagcagctggttatccagattactattgcaaatggcagggtctgccttactca
gaatgcagctgggaagatggtgctctcattgctaaaaaatttcaggcacgcattgacgag
tattttagcagaaatcaatccaagaccactccctttaaggactgcaaggttctaaaacag
aggccaaggtttgttgcgctaaagaagcaaccgtcttatattggagggcatgaaagttta
gaattaagagactatcagttaaatggactgaactggcttgctcattcatggtgcaaaggg
aatagttgtattcttgcggatgaaatgggtttgggtaaaacaatacaaacgatttctttt
ctgaactacctatttcatgaacatcaactatatggacctttcttgctcgtcgtgccactt
tccaccttgacatcttggcaaagagagattcagacttgggctcctcagatgaatgctgtg
gtttacttaggagatataactagcagaaatatgataagaactcatgaatggatgcatcca
cagaccaagcgattaaaatttaatatacttctaacaacttatgaaatcttgctgaaagat
aagtcgttccttggtggtctgaattgggcatttataggagttgacgaagctcatcgttta
aaaaatgacgattcccttctgtacaagactttaatagactttaagtctaaccatcgtctt
cttattactggaactcctctgcaaaactccctcaaggagctttggtctttgcttcacttc
atcatgccagaaaagttttcttcctgggaagattttgaagaggagcatggcaaagggaga
gagtttggttatgcaagtcttcacaaagaacttgaaccatttctactgagaagagttaaa
aaagatgtagaaaagtctttacctgctaaggttgaacaaattttgaggatggaaatgagt
gcattgcaaaagcaatattacaagtggattttaacaaggaattacaaagctctgagtaaa
ggttcaaaaggcagtacctcaggctttttgaacatcatgatggaactcaagaagtgttgt
aaccattgctacctcattaaaccaccagatgataatgaattctataataaacaggaggcc
ttacagcatttaatacgtagcagcgggaaactaatccttcttgacaagctactgattcgt
ctccgagaacgtggcaacagagttttgattttctctcagatggtgaggatgctggacatc
ctagcagagtatttgaagtatcgtcagtttccctttcaaagactcgatgggtcaataaaa
ggggaattgaggaaacaagcactggatcattttaatgcagaaggatcagaggacttctgc
tttttactgtctaccagagccggaggattaggtataaacttggcatctgctgacactgta
gttatatttgattctgactggaatccacagaacgatctgcaagcgcaggctagagcccat
aggattggacagaagaagcaggttaatatttatcggctagtcacaaaaggatcagtagaa
gaggatattcttgaaagagccaagaaaaagatggtgttagatcatttagtaattcagagg
atggacactacagggaaaactgtgctacatacaggctctactccttcaagctcaacgccc
tttaataaggaagagttatcagcaattttgaaatttggtgctgaggaactttttaaagaa
ccagaaggggaagaacaggagccccaggaaatggatatagatgaaatcttgaagagggct
gaaacgcgggaaaatgagccaggcccattaactgtaggagatgagctgctttcacagttt
aaggtggccaacttttccaatatggatgaagatgacattgagttggaaccagaacgaaat
tcaagaaattgggaagaaatcattccagaagtccagcggcgaagaatagaagaggaggaa
agacaaaaagaacttgaagaaatatatatgctcccaaggatgagaaactgtgcaaaacag
atcagctttaatggaagcgaaggaagacgcagtaggaacagaaggtattctggatctgat
agtgactccatctcagaaagaaaacggccaaagaaacgtggaagaccgcgaactattcct
cgagagaatattaaaggatttagtgatgcagagattagacgatttatcaagagttacaag
aaattcggtggccctcttgaaaggttagacgctatagctagagatgctgagctagttgat
aaatctgagaccgaccttaggcgtctgggagagcttgtacataatggatgcattaaggct
ttaaaggacaattcttccggaccagaaagagcaggaggtagacttgggaaagttaaaggc
ccaacattccgaatatcaggagtgcaagtaaatgcaaagctcgtcatttctcacgaagaa
gagttggcaccgttgcataaatccattccttcagatccagaagaaaggaaaagatatgtc
gtcccctgccacaccaaggcagctcattttgatatagattggggtaaggaagatgattcc
aatctgttaataggcatctatgaatatggttacggcagctgggaaatgataaaaatggat
cctgatctcagtttgacacagaagattttacctgacgatccagataagaaaccccaggcc
aagcagttacagacccgtgcagactacctcattaaattactgaataaagaccttgcaaga
aaggaagcacagagacttgctggtgcaggcaattcaaagaggaggaaaacaagaactaag
aagaataaagtgctaaaggctgcaaaagtaaaagaagaaataaaaagtgactcttctcca
ccaccctcagaaaagtctgatgaagatgaagatgaggataacaaggatgagattgtttca
gtgaaacatccacataaaaaaataaaagcagaaaaagaaaatgaagaaaagcctgagcca
gatattggtataaagaaggaagctgaagaaaaaagagagacaaaagagaaggaaaataag
agggatttgaaaagggagaaaaaagaaaaagaggataagaaagaattaaaagaaaaagat
attaaagaaaagagagaaaacaaagtaaaagaatccacacagaaagaaaaagaagtaaag
gaagagaaggtgaatgaaaccaaatctgaaaataaagaaaaaactaaaaaagttccgttg
tcggatactccggttcatattacagcaactagtgagccagttcctatatctgaggaatct
gaagagcttgatcagaagacattcagtgtgtgcaaagaaagaatgaggcctgtcaaagca
gcgttgaaacagctggatagaccagagaaaggcctttctgaaagggaacagctagaacat
actagacagtgtctaatcaaaattggagatcacattactgaatgtctaaaggagtacaca
aatcctgaacaaattaaacaatggaggaaaaatctgtggatatttgtctctaagtttaca
gaatttgatgccagaaagctgcacaagctgtacaaacatgcaatcaaaaaacgtcaagag
tctcagcaacacaacgaccagaatatcagcagcaatgtgaatacacatgtaattagaaat
ccagatgtggaaagactgaaagagaatacaaatcatgatgacagtagcagggacagttat
tcttctgatagacacctgtcacaataccatgatcatcacaaagacaggcatcagggagat
gcttataaaaaaagtgactcgaggaaaaggccctattcagccttcagcaatggaaaagat
catagagactgggatcactacaaacaagacagcagatactacagtgatagtaaacacaga
aagttggatgatcacaggagcagagatcacaggtcaaacttggaaggaagtttaaaagac
agtcggcctcattcagaccaccgttcccattcagaccaccggatacattcagatcaccgt
tccacttcagagtacagtcatcataaatcttctcgagattataggtaccactcagactgg
caaatggaccacagagcttctggtagtggcccaaggtcaccattagatcagaggtctcct
tacggttcaagatctcccttaggacacagatctccgtttgaacactcatcagatcacaaa
agtacacctgaacattcatggagtagccggaaaacataa
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integrated database retrieval system
