Struthio camelus australis (South African ostrich): 104150552
Help
Entry
104150552 CDS
T08512
Symbol
THOC2
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03013
Nucleocytoplasmic transport
scam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104150552 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
104150552 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104150552 (THOC2)
03041 Spliceosome [BR:
scam03041
]
104150552 (THOC2)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104150552 (THOC2)
Spliceosome [BR:
scam03041
]
Complex C
Other components
EJC/TREX
104150552 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104150552 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
104150552
NCBI-ProteinID:
XP_009683192
Ensembl:
ENSSCUG00000000277
LinkDB
All DBs
Position
Unknown
AA seq
1588 aa
AA seq
DB search
MWVSKATLQLCRALSENKSHDNMGFRDIQQALYELAYHVVRGNLKHDQASNVLGDVIEFR
EDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVLKERLDPETLESLGL
IKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIK
SLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQD
PSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVV
LSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHK
PIAIALCQLVHVTIEPLYRRVGVPKGAKGSPIPSLPNKRAPKQADSFEDLRKEVFNMLCY
LGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMEILFSCLLSITDQVLLPSLSL
MDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLT
KENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCII
EALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLL
ILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHD
LALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRV
PSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVM
APVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQ
EMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLXXXXXGKTIFST
KNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVA
SCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLD
YENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVH
KICQEEKEKRPDLYALAMGYSGQLKSRKPYMVPENEFHHKDPPARNAVAATVQNGPGGAG
MPTSLSINTAKLEESTAEETDKLKEKSQGAVKVINKAVNATPKVTTSNGNSASNSKIIKE
KDDKEKGGKEKDKEKKEKTPAATPETKALGKDGKDKPKEERANKDDKAREIKEKTPKSDK
EKEKAKKEEKTSKEEKLKTVVTNIESKSAAEKEREKEPSRERDVAKDMKSKENAKGGEKM
PVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLSELKDSSAKHYINHTTP
TLSKSKEREVEKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKRRKEENG
TTGSSKHSKSESPSDSPRSNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDK
EKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgtgggttagtaaggcaactttgcaactatgccgtgctctcagtgaaaacaaaagccat
gataatatgggtttcagagatatccaacaggctttgtatgagcttgcatatcacgttgta
agaggaaacctaaagcatgatcaagcttctaatgttcttggtgatgttatagaatttcgg
gaagacatgccctccatcttagctgatgtattctgcatattggatattgaaacaagttgt
ttagaagaaaaaagtaagagggatcattttacccagttggtattagcctgtttgtatctt
gtatctgacactgtcctaaaggagcgcttagatccagaaacattggagtcattaggactt
atcaagcagtctcaacagttcaatcagaaatctgttaaaataaagacaaaattattttat
aagcaacagaagtttaatttgttaagagaggagaatgaaggttatgcaaaactgattgca
gaactggggcaagacttatctggaaatatcactagtgatttaatccttgaaaatatcaaa
tctttaataggatgttttaaccttgatccgaacagagttttggatataattctagaagtt
tatgagtgcaggcctgagtatgatgatttctttgtaccactgatagagtcctacatgtac
atgtgtgaacctcagactctttgccatatccttgggttcaaattcaaattttatcaggat
ccaagtggtgagacaccttcttctttatacagagttgctgctgtccttttgcaacacaat
ctcattgatttggaagatctttatgttcaccttcttccaggagataatgccatcattgag
gaacacaagcgagagatagtagaagctaagcaaattgtcagaaaacttacgatggttgtc
ttgtcctctgaaaagactgaagaaaaagagaaggaaaaagaaaaggaggaggaaaaaact
gaaaagccacctgataatcaaaagcttggtttattggaagctttattaaaaattggtgat
tggcagcatgcacaaagtattatggatcagatgcctccattttatgctacttcacacaag
cctattgcgattgccctttgccagcttgtacatgtgacaattgaacctctgtatcgcaga
gttggagtacctaaaggggctaaagggtcaccaattccttctttgccaaacaagagagca
ccaaaacaagcagacagttttgaagacttgagaaaggaagtgttcaacatgctttgttac
cttggtcctcatctttcccatgatcccattttattcgcaaaagtggtgcgcctcggaaaa
gcatttatgaaagagtttcagtctgatggaagcaaacaagaagataaagagaaaatggag
attttatttagctgtttgttgagtattaccgatcaagtgttgcttccatctctttctttg
atggactgcaatgcatgcatgtctgaagaattgtggggaatgttcaaaacttttccatac
cagtaccggtatcgtctttacggacaatggaagaacgaaacatacaatagtcacccgctt
ttagtgaaagttaaagctcaaaccatagatcgagccaaatatatcatgaagcgtctaaca
aaggaaaatgtgaaaccctctggaagacaaattggaaaactcagccacagcaatcctaca
attttatttgattatattttatcacaaatacagaagtatgataacttaataactccagtt
gttgattcactgaaatacctcacttcactgaattatgatgtcttggcctactgtattatt
gaagccctggcaaatcccgaaaaggagagaatgaagcatgatgacaccacaatctcaagc
tggctgcagagtctggctagcttttgtggtgcagttttccgaaagtacccaattgaactt
gctggtctacttcaatatgtagcaaaccaactgaaagctgggaaaagctttgatttgctt
attttaaaagaggtggtacaaaaaatggctgggatagaaattactgaagaaatgacaatg
gaacaattggaagccatgactggtggagaacagctaaaagctgagggtggatactttggc
caaatcaggaacacaaaaaaatcttctcagagattgaaggatgcgttgttggaccatgat
cttgcccttccactctgcctacttatggctcaacagagaaatggtgtgatcttccaagag
ggaggggaaaaacatctgaagcttgtgggaaaactgtatgatcagtgccatgacaccctg
gtacagtttggtggatttttagcatctaatctaagcacggaggattacattaagcgagtg
ccttctattgatgttctttgtaatgagtttcacacacctcatgatgctgcatttttcctt
tcaagacccatgtatgcacaccatatttcatcaaagtatgatgaactaaaaaaagctgag
aagggaaacaaacagcagcacaaagttcacaaatacattacatcatgtgagctggtcatg
gctcctgttcatgatgctgtgatctctctgcaccttcccaaggtttgggatgacatcagt
cctcagttttatgctacattctggtctctgacaatgtatgaccttgctgtcccacatagt
agctatgacagagaagtcaataaacttaaagtccagatgaaagccatagatgacaatcag
gaaatgcctccaaataaaaagaaaaaagaaaaagaacgttgtacagctcttcaggacaag
cttcttgaggaagagaagaaacagttggagcatgtgcaaagggttctgcagagactgaaa
ctggagaaggataactggcttctggnnnnnnnnnngtagggaaaaactattttttctacc
aaaaatgagactatcacaaaatttctgcagttatgtatatttcctcgctgtattttttcg
gcaatcgatgcggtttattgtgcacactttgtagaactggtgcatcagcagaaaacaccc
aacttctccacgcttctctgttatgatagagttttctctgatattatatatacagtagca
agttgcactgaaaatgaagctagtagatatggcaggtttttatgctgtatgctggagacc
gtgactagatggcacagtgacagagtcatatatgaaaaggaatgtggcaactacccaggc
ttcctcactatattacgggcaactggatttgatggtggaaataaagctgatcaattggat
tatgagaattttagacatgtggtacacaaatggcactataagttaactaaggcttctgtg
cactgccttgaaacaggtgaatatacacatatcagaaatatcctgattgtgctgaccaaa
atccttccgtggtatccaaaagtattgaacctgggccaagccttggaaagaagagtacat
aagatatgtcaggaagagaaagagaagagacctgatctatatgcgttggctatgggctat
tctgggcagttgaaaagtaggaagccttacatggtacctgaaaatgaatttcaccacaaa
gacccacctgccaggaatgctgtagctgcaacagtacaaaatgggccaggtggtgctggg
atgcctacatctctctcaataaatacagctaaactggaagaaagcactgctgaggagact
gataaactaaaggagaaatctcagggtgctgtgaaagttattaataaagctgtcaatgct
acaccaaaggtgacaacaagcaatggaaacagtgcttctaatagcaaaattattaaagaa
aaagatgataaagaaaaaggtgggaaggaaaaagataaagaaaaaaaagaaaagactcca
gctgccactccagagaccaaggcacttgggaaggatggaaaagataaaccaaaggaagaa
cgggcaaataaagatgataaagcaagagagatcaaggagaaaacgccaaaatcggacaag
gagaaggaaaaagccaagaaagaagaaaaaacttcaaaagaagaaaaattgaagacagtt
gttaccaacattgagtcaaagtcagctgcagaaaaggagagagaaaaggagccgtccaga
gaaagagatgtagcgaaggatatgaaatccaaggaaaatgctaaaggaggagaaaagatg
ccagtagctgggtccttgaagtcacctgttccccgatcagaaacgtcagaatctgaaagg
gaacaaaaacgccgcaaagttgatacccattcttctccgtcacattcctcaacagtaaag
gacaacctcagcgaactcaaggactcttcagcaaagcactacattaaccacactactcca
acactgtccaagagtaaggagagagaagtggagaagaaagatttggacaagtcaagggaa
agatcaagagagagagagaagaaagatgaaaaggacaggaaagatcgaaaaagggatcat
tcaaacagtgaccgggaggtgccacaggattcaactaaacgacgcaaagaggaaaatggg
acaactggttcttcaaaacatagtaaaagtgaaagtccctctgattcccctcgctcaaat
gaaaaagagaaagagaagaacaaatcaaaatcttcaggtaaagaaaaaggtgattcaatc
aaagcagagaagatggagaagagctcatctggtagcaaaaaggaatcaagacatgataaa
gaaaaaacagaaaagaaagaaaaacgagacagcactggagggaaagaagaaaagaaacat
cataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
