Struthio camelus australis (South African ostrich): 104150657
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Entry
104150657 CDS
T08512
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104150657 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104150657 (NUP188)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104150657 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
104150657
NCBI-ProteinID:
XP_009683325
Ensembl:
ENSSCUG00000017791
LinkDB
All DBs
Position
Unknown
AA seq
1714 aa
AA seq
DB search
MCPEAQIAAELNKHWQRLLEGLSYYKPPSTTSAEKIKADKDVAAPLKELGLRVSKFLGLD
EEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQALILKLADYYYEERICILRCVLHLLT
YFQDERHPYTAQYFQCIEKLDKELVPNYRKQFEELYKAEAPTWETHGNLMTERQISRWFV
QCLREQSMLLEVIFLYYAYFEMSPDELLAFAKMFKEQGFGTRQTNRHLVDESMDHLVDRI
GYFSALILVEGMEIDSLHERALDDRTEEHKLASNEHIHQEMDNQLLQLGDVSHHAPVLLA
WALLRHTVSPEESTNMIRRMGSTAIQLNVFQYLTKLLRSLSSGGKNCTASTACMCIYGLL
SFVLTSLELHTLGNQQDIIDAACEVLAASSIPQLFWKTEPTAGLGIILDSVCGMFPHLLT
PLLQLLQALVSDKSTAKKVYSFLDKMSFYIELYKHKPPDVISHEDGTLWRRQAPKLLYPL
GLGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWTLFTCEIEMLLHVVSTADVIQHCQR
VKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLTTVISPPVDVIASCVNCLTVLAAR
MPAKVWTDLHHTGFLPFVANPVSSMNHMISAEGMNAGGYGNLLMSIEQPQGEYSVTISFL
NLITTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKWRYNSHGVREKIGCLILQLIHAIL
NLCPEMDPRSSNAPSLQSLCIFSLANTEAGQAVINIMGIGVDTIDMVMASQSSSDESQGQ
GQLLIQTVKLAFSVTNNVIRLKPPSSVVSPLEQALTQHGAHGNNLIAVLAKYIYHKHDPA
LPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLTRLQSKIEDMRIKVMILEFLTVAV
ETQPGLIELFLNLEVKDGNDGSKEFSLGEWSCLQVVLELIDSKQQERYWCPPLLHRAAIA
FLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLPPPSETSELSVLDTCALIMKIICLE
IYYVVKGSLDQSLKDTLKNFSTKKRFAYWSEYVKLLAYHVAETEGSSCASMTEYQMLISA
WRMLLIISTSHADIMHLTDSAVHQQLFLDVLNGTKVLLLVPMSVSCLQLASMLCTLLLIL
LKQWKSELGSVDKIINSLTQILEGVLQADQQMMEKTKAKVFSALITVLQMKEMKVNEIPQ
YSQLVLSVCETLQDEVIALFDQTRNSLTSGDATDDKDSMETDDASRVKQKDQRDGVCVLG
LHLAKELCEVDEDGDYWLQITRKVPVLPTIFAALEISLRVKQNLHFTEASLHLLLTLART
QQGAAAVAGAGVTQSVCLPLLSVYQLSTNGAIQTSASSRKSLDAPSWPGVYRLSMSLMER
LLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSLACLEEADHTVGFILQLSNFTKEW
HFHLPQLMRDTQVNLCYLCQACTSLLHSRKMLQHYLQTKNGDSLPSSVTPRVQRNPQASS
KHPSPESEAAEQKALLTVQYSLLKILSKSLAALRHFTPDVCQILLDQSLDLAEYNVLFVL
SFTTPAFDSDVAPSFGTLLATVNVALNMLGELDKKKEPFPQAAGLNMQEGTKTLKSLLMF
TMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSSELSTLLSSLSRYFRRGGPSSPAGG
VLPSPQGKSVSKLGPEGQEPLFQLVQAFVRHVQR
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccagaggctcagattgcggcagaattgaacaaacactggcagaggctgttagag
gggctctcatactacaaacccccaagcacgacttccgcagaaaaaataaaagctgataaa
gatgtagctgctccactaaaagaattgggtctgagggtcagcaagtttttgggtctggat
gaggagcagagtgtgcagttgttacagtgttatcttcaggaggattatagagggacaagg
gactccctgaagaccgttcttcaggatgaaaggcagagtcaggctctgatactgaagctt
gctgactattactatgaagagaggatctgtattctgcgctgcgtcctccacctgctcact
tattttcaggatgagaggcacccttatacagcacagtactttcagtgtatcgaaaagttg
gacaaggaactggttcctaactaccggaaacagtttgaagagctgtacaaagcagaagct
cctacgtgggaaacgcatggaaatctcatgacagaacgtcagatttcccgctggtttgtg
caatgcctccgtgaacagtccatgctcctggaagtcatcttcctctattatgcatatttt
gaaatgtcacctgatgagcttctggcatttgcaaagatgttcaaagaacaaggatttggc
actagacaaacaaacagacacttggtagatgaaagcatggatcacttggtggaccgtatt
ggatactttagtgctcttattctggtggaaggcatggaaatagactccctgcatgagcgt
gctttggatgacaggacagaagagcacaaattagccagtaatgagcatatccaccaggaa
atggacaatcagctgctgcagttaggggatgtctcacatcatgcacctgtgcttttggcc
tgggctctgctccgtcatactgtaagcccagaagagtcaacaaacatgatcaggagaatg
ggcagcactgctatccagctgaacgtgttccagtatttaacaaagcttctccgatcactg
agcagtggagggaagaattgtactgccagcacagcttgcatgtgtatttatgggctgctt
tcctttgtcctgacatcactggaattgcatacgttaggtaatcagcaggatataattgat
gcagcgtgtgaagttctggcagcttccagtattcctcagctcttctggaagacggaacca
actgcaggtctgggtattatcctggacagcgtgtgtgggatgttcccccatcttcttact
cctctccttcagctgctccaagcccttgtgtcggacaaatctactgcaaaaaaggtgtac
agtttcctggataaaatgtcattctatattgaattgtacaagcataaacctcctgatgtg
atttctcatgaagatggcacactttggcgaagacaggctccaaagctactctaccctctt
gggctaggccagacaaatctacggatacctcagggaacagtaggccaagtgatgctggat
gatcgggcttatttggtacgatgggagtattcctacagcagctggacactgttcacctgt
gagattgagatgctgctccatgttgtatcaacagcagatgtgattcagcattgccagagg
gtaaagccgatcattgatctggttcataaagtcatcagcactgatgtatcaatagcagat
tgtcttctaccaatcacatcacgaatctacatgctcctgcagaggctaacgactgtaatc
tctccccctgttgatgttattgcttcttgtgtcaattgtttgacagtactggctgctcgg
atgccagccaaggtttggaccgaccttcaccatacagggttcctgccatttgttgccaat
ccagtgtccagtatgaatcacatgattagtgcggaagggatgaatgctgggggctatgga
aacctactgatgagcatagaacagcctcaaggcgagtacagcgttaccatctccttcctg
aatctgatcacgactcttgtccggggacaacttggtagcacccagagccaagggcttgtg
ccctgcattgtgtttgtcctgaaggagatgttaccaaattaccacaaatggcgctataac
tcccacggagtgagagagaaaattgggtgcctgattctgcagctgatccatgctatactg
aatttatgccctgaaatggatcctcgcagtagcaatgcccccagccttcagtccttgtgc
atcttcagtctggccaacactgaagcagggcaagctgtcattaacatcatgggaattggt
gtggacacaattgatatggtaatggcttcccagtctagtagtgatgagtcacaaggccaa
ggtcaactgctgatacaaacagtgaagctggcattctcagtcacgaataacgtcatccga
ttgaaacccccttctagtgtggtgtctccattagaacaggcgcttactcagcatggtgct
cacggaaacaatcttattgcggtcttggccaaatacatctaccacaaacatgaccctgca
cttccacgcctggccatccaattgctcaaacgactggctacggttgctcccatgtcagtt
tatgcctgccttggtagtgatgctgctgccatccgtgatgccttcctgacccgcctgcag
agcaagattgaggacatgcgtattaaagtcatgatcctggaattcctcacagttgcagtg
gagacacaacctgggctcattgaactgttcctgaacttggaagtgaaggacggcaatgat
gggtcaaaggaattcagcttaggggagtggagttgtctccaagttgtcttagagctgata
gactccaaacaacaggagaggtactggtgccctcccctcttgcatcgggctgccattgcc
ttcctgcatgccctgtggcaggaccgccgagatagcgccatgttagttctgaggaccaag
ccaaaattttgggaaaacttaaccaatcctctcttcgggacacttcctcccccttcggaa
acgtcagagctcagtgtcttggacacctgtgccttaatcatgaaaatcatctgcctggag
atctactatgttgtcaagggctcactggatcagtccctgaaagacacgctgaagaacttc
tccaccaaaaagcgctttgcttattggtcagaatatgtcaagttactggcatatcatgtg
gcagagacagagggtagcagctgtgcctccatgacagaatatcagatgctgatctcagcc
tggcggatgctgctgattatttctactagccatgcagatataatgcatctgactgattca
gcagtccatcagcaattgtttctggatgtgctaaatgggaccaaggttttgcttctggtt
cccatgtcagtgtcctgtctgcagttggcatccatgttatgtactctccttctgatcctg
ctcaaacagtggaagagcgagttgggttctgtggataaaatcataaactccttgacgcag
attctggagggagtactacaggcagatcagcagatgatggagaagaccaaagccaaagtg
ttctcagctctcatcactgtgttgcaaatgaaggagatgaaagtgaatgagattccacag
tactcccagctggtgctcagtgtgtgtgaaacactccaagatgaggtcattgcactcttt
gatcagactcggaacagcctgacctctggagatgctacagatgataaagacagcatggaa
acagatgatgcctcgcgagttaaacagaaggaccagcgagatggggtatgtgttctgggt
ctgcatctggcaaaagaactctgtgaagttgatgaagatggagactactggctacagatt
acaaggaaagtccctgtgcttcctaccatctttgctgccttggagatcagcctgagagtt
aaacaaaaccttcacttcacagaggcctcgttgcatttactgctgaccttagcaaggacg
caacagggggcagcagcagtggctggagctggtgtcacacagagtgtctgcctgcccctc
ttgagtgtgtaccagcttagcactaatggagccattcagacatctgcttcatctcgaaaa
tctctggatgccccctcttggcctggggtctatcgtctctccatgtcattgatggagcgt
cttcttaagacgcttagatacaacttcctaacagaagccctggattttgtgggtgtccat
caagagaggattcttcagtgcctgaatgcagtacggacagtacagagcttggcctgcctg
gaggaggctgatcacactgttggcttcattctccagctctcaaatttcacgaaagaatgg
cattttcacctaccacagcttatgagggacacacaggtgaatctgtgttacctgtgtcag
gcctgcacctccctcctgcatagtcgcaaaatgctccagcactatctacagacaaaaaat
ggtgactcccttccatcaagtgtgactccacgagtgcagcgtaacccccaagcctcttct
aaacatcccagccccgagtcagaggcagcagagcagaaggcgctgcttacagtgcagtac
agcctcttaaaaatcctcagcaaatctcttgctgccctgcgtcattttactcctgatgtc
tgccagatcctcctcgatcagtcactagaccttgctgagtacaacgtgctcttcgttttg
agtttcaccacaccagcctttgattcagatgttgcaccctcctttgggaccctcctcgcc
acagttaacgtggcccttaacatgttgggagagctggataagaagaaggaacctttccct
caagctgcagggctgaatatgcaagagggaaccaaaaccctcaagtctctgctcatgttt
acaatggaaaactgtttctacctgctcatctcccaggctgttcggtatttgagggaccca
gctgtgcatccccgtgacaagcagcggatgaaacaggagctcagctctgagctgagtacg
ctgctctccagcctgtctcgttacttccgccgtggtggcccttcttcacctgctggtggg
gttcttccctctccccagggaaagtctgtttccaagctgggtcccgaggggcaggagcct
ttgttccagctcgtgcaggcctttgtcaggcatgtgcagagatag
DBGET
integrated database retrieval system
