Struthio camelus australis (South African ostrich): 104150981
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Entry
104150981 CDS
T08512
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104150981 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104150981 (EDC4)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104150981 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
104150981 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_HPS5
WD40_CDC20-Fz
DUF445
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
DUF5610
CTD6
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
104150981
NCBI-ProteinID:
XP_009683822
Ensembl:
ENSSCUG00000002898
LinkDB
All DBs
Position
Unknown
AA seq
1371 aa
AA seq
DB search
MSVLLTSIKKLRYLCSVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSLSKPVHRSISLGV
LQEKQVICLSGDDSSTCIVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYDWEQKYY
CGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVADLAFAHLNSNQLA
CLDEAGNLFVWRLAMEKEKIQEEILVNIKRPDNTPLNTSRRIIWCPFIPDDNEESGEEGS
QTLALLHEDRAEVWDLDIIRTNNSSWPVEVPSIKEGFIVVKGHSTCLSEGALSPDGTVLA
TASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITG
ADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYLILSDVQRKVLYV
MELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDNLSVEGAQ
GAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDVAASIPSHGSHEEFAFPDHMADL
STEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAFMTPSTSLQQITV
SPGSSVSSLTAVTAMSSTSVTDTSMPRVSEDLTVSPKMQLDTSLTLSSSSSSLQTSPRSH
SVLIPSLPDKLTPKAPVPVTPGNPSLALELQEMEPLVVPQASPTRERSPDVISSASTAMS
QDIPEIASETLQRSFAAGPSGLPAEVLEPSHHADSMASAASALHLLSPRNRHNSDHSHRS
LDMPQVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRNSMADSPRDEVEE
KHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASTQRLPVKDWKAK
ASPRASPKLKRKGKKDDGDVNQSPRSSNNQVTPEFQDELMCILRSQQRELSELRQNQMEL
LQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQLQEHLSQQLSQSL
STAVCNRLERTIREEMKKTVPQCISKSMEPIAGQLSNTVAAKLTAIEGTLKENITKLVKS
KNLTDTVVRATADTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINETFKQGTQEYIQQ
LETHMKLISTFQSTTEQLASTIAASVHAEVQHQLHIIVGNLQKFILAQVQRVIKGEVSLA
MKEQQAAVTSSIVQAMRSAAGTPIPSTHMDFQSQQTHILQLLQQGHLNQAFQQALTAADL
NLVLYVCETVDPQQVFGQHPCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEEAVMHLDHS
DPITRDHMGSVMNQVRQKLFQFLQVEPHNALSKPARRLMIMLQGLVTPSMT
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcctgctgacaagcataaaaaagctgagatacttatgttcagtgaatgagaac
cagagaccatcaaattcgtataacggagacctgaatggactgctggtgcctgatcccatt
gtggctggagatggaccttctttgtctaagccggtgcatcgcagcatttctctgggagtc
ctgcaggagaagcaagtcatctgcctttccggtgatgacagctccacttgcatagtgata
tcagcaaaagatgtggagatagtggccagcagtgattccagcatcaccagtaaggccaga
gggagtaacaaggtgaaaatacagcctgttgctagatatgactgggagcagaaatactac
tgtggcaatctgatagctgtttcaaactcttacttggcttatgctattagagctgccagt
aatggctccgctatggtgcgggtgttgagcgtcagcactgctgagcggaccttgctgaaa
ggattcacaggcggtgtggcagacctggcttttgcccatctcaactccaaccagctggca
tgcctggatgaggctggcaacctttttgtctggcgcttggccatggagaaagagaaaatt
caagaggagatcttagtgaacatcaaacgacctgacaataccccactgaacacctctcga
agaatcatctggtgtcctttcatcccagatgataatgaggagagtggtgaagagggaagt
caaacattggcattgttgcatgaggacagggcagaggtgtgggatttggacattattcga
acaaacaacagctcctggccagtggaagtgcccagcatcaaagaaggcttcattgtagtg
aaaggtcacagcacgtgcctgagtgagggagcactttctccagatggaactgtgttggcc
acagcaagccacgatggttttgtcaaattctggcagatctatattgaggggcaagatgag
ccaaggtgtctccatgagtggaaaccccatgatggtaggcccctctcctgcctcctcttc
tgtgacaaccataaaaagcaagacccagaggttcccttctggagatttcttatcacagga
gcagatcaaaatagagagttgaagatgtggtgcactgtatcttggacctgtctgcagact
gtccgcttttctccagacatcttcagctctatgagtattcttcccagcctgaaagtctgc
cttgacctctccgctgaatacctgatactgagtgatgtgcaaagaaaagtcttgtatgtg
atggaactgatgcagaaccaagaggagggcaaagcttactttagctccatttccgagttc
ctccttacccacccagttctaagctttggtatccaggcagtgagccgctgccggttaagg
catactgaagtgctcccagcagaagaggaaaatgacaacttgagtgtggaaggtgctcag
ggagctggggctgttgagtcggcagcaggcgtacttataaaactgttctgtgtgcacacc
aaggcgctacaggatgtacagatcagattccagcctctccatagtcctgacgtggctgca
tccataccttcccatggctctcatgaagaatttgcctttccagaccatatggctgatcta
agcacagaagggctgggatctgaaaagggatctgtgcacggctctcaacctgacttgcgg
cgcattgctgatctccctgtaccagcagactttctttctctctcaaatgatgccaaacct
aagttgatgactccagatgcattcatgaccccaagtacatctcttcaacagatcactgta
tctccaggcagtagcgtcagttccctgactgcagtcacagccatgagtagcacttctgtc
actgacacctctatgcccagggtatcggaagacttgacggtgagccccaagatgcagctg
gacaccagcctcacgctgagtagcagtagcagcagtcttcaaaccagtcctaggagccat
tcagttcttatccctagcctccctgacaagctaacaccaaaggcacctgttccagtcacg
ccgggaaacccttctctagctctggaactgcaggaaatggagcccttggtggtgcctcag
gcttctcccacccgtgaacgttcgccagatgtcatttcctctgcttccacagccatgtcc
caagatatcccagagattgcttctgagaccttgcaacgcagctttgcagctggcccatct
gggctccctgcagaggtgctggagcccagtcatcatgcagacagtatggcatccgctgct
tcagccttgcatttgctatctccaaggaaccggcacaattctgatcacagccaccgctct
ttggacatgcctcaagtggaggtggacagactgaacgctccatcattactggagactgct
ttaactcaggaaaacgcatcttctgacagtgttgtgagtcagccttggccagcagctcct
gacataaccagagaaactaggaacagcatggcagacagcccgagggatgaagttgaagaa
aagcacaagagctcttcctatcaccgacacagctaccacctgctgcagcatgacagccag
gatgctagtgcagaacagagtgaccatgacgatgaagttgcgagtttggcttctacgtca
ggtggatttggtgccaaagcatctacgcagaggctgcctgtgaaggactggaaagccaag
gcatcccctcgggcttccccaaagctaaaacggaagggcaagaaagatgacggggatgtg
aaccagtcaccaagatcatctaacaaccaggtgacacctgagttccaggatgagctgatg
tgcatattgaggagccaacagcgagagctctctgagctgcgtcagaaccagatggagctg
ctgcagagactcacggatcaccttgatgccattcagagctccctcatgggccatgtggag
agggtgattgattcccagcaggagcaggagcagaggagactagaccgagcactgactgaa
ggacagcagcgcaatgggcagctccaggagcatctttctcagcagctctctcagtctctc
tccactgcagtgtgtaatcgtctggagagaaccattcgtgaagagatgaagaagacagta
ccccagtgcatttccaagagcatggaacctattgctggccagctaagtaacactgttgcc
gccaagctcactgctattgagggcacactgaaagagaacatcaccaaactagtgaaatca
aagaaccttacagataccgttgtgagggcaacggccgataccctgcaaggaccaatccaa
tcagcgtacagggaagcattccaaagtgttgtgttgccagcctttgagaagagctgccag
tccatgttccagcaaatcaatgaaaccttcaagcagggcacacaggaatatatccagcag
cttgagacgcacatgaagctcatcagcaccttccagagcaccactgagcaactggcttcc
accattgcggccagtgtccatgctgaggtgcagcatcagctgcatattattgtgggcaac
ctgcagaagtttattttggcccaggtgcagagagtcattaaaggagaagtgagcctggct
atgaaggagcagcaagcagctgtcacctcaagcattgtccaggcgatgcgctcagcggca
gggactccaatcccatctactcacatggacttccagtctcagcaaactcacatccttcag
ctgctgcagcaaggacacctcaatcaagctttccagcaggctctaacagcagctgatctc
aatctggtcctgtatgtctgtgagactgtggatcctcagcaagtatttggccagcatcca
tgcccgctgtcccagcctgtgctcctgtctctcattcagcagctctcctcagatttgggt
actcgtacagaactgaaactgaattacttggaggaagcagtgatgcacctggaccacagt
gaccccattacccgtgaccacatggggtctgtcatgaaccaggtgcggcagaagctcttc
cagttcctccaggtggaaccccacaacgcgctgagcaagcctgcccgtcgcctcatgatc
atgcttcagggcctggtcacccctagcatgacctag
DBGET
integrated database retrieval system
