Struthio camelus australis (South African ostrich): 104151140
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Entry
104151140 CDS
T08512
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104151140 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104151140 (PATL1)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104151140 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
104151140 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
104151140
NCBI-ProteinID:
XP_009684044
Ensembl:
ENSSCUG00000013472
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MQAVQTRAPAQQPGGLNSSIWDGSAVLRRIRGPLLTQEMPSVSVLAPRRPPQARDEERDP
SERALPRRSSSPVIGSPPVRAIPIGTPPKQAAVPNFNQQILCPKPVHIRATMQQRYPAPY
GERMSPNQLCNVPNSSLLGHPFPHSVSPVLTHLQRAQLLGGAQAGRMSPSQFARVSSLVG
SPLPSVNPKLLQGRVGQMMSPASGFRAFFGAPPAPPPSQPQHPPGPGSHLQSLRPQPQMF
RPDTTHLHPQHRRLLHQRQQQNRNQHRSLNGSVGDRGGHRSSHQEQMRKDPYANLMLQRE
KDWVSKIQMMQLQSTDPYLDDYYYQNYFQKLEKLSAAEEVQGDGPKKERTKLITPQVAKL
EHTYKPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRQTLVTIEKT
YSLLLDVEDYERRYLLSLEGERPALMGERKQKICDMYDNLRGKAPGQERPSDDHFIQIMC
IRKGKRLVARILPFLSPEQAADVLMATARNLPFLIKKDAQDEVLPCLLRPFSHVLYHLPL
GTVTSLVQQLTNLPQSATAPAPTNLHLTAVLQNKFGLSLLYLVLSRGEELQSSDANTELM
QDNQWTELMLMATRELLRIPQVALAKPVSTPSNLISLFSRYVDQQKLNLLETKLHLVHGI
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcagtgcaaaccagggcccctgcccagcagccaggagggctgaactccagcatc
tgggatggctcggctgtcctgcggcgtatccgagggccgcttctcactcaggagatgcct
tcggtgtccgtgctggcccctcggagacccccacaggcccgagatgaagagcgggacccc
tcagagcgggcgctgccccggcgttcgtcatccccggtcatcgggagtcccccagtccgg
gccatccccattggcacccctcccaagcaggctgctgtgcccaacttcaaccagcagatt
ctatgtccaaagcctgttcacatccgggccaccatgcagcagcgttaccctgctccctac
ggcgagaggatgtcccccaatcagctctgcaacgtgccgaattcctcccttttgggccac
ccgttcccccacagtgtctctcctgtcctcacccacctgcagagagcacagctgcttgga
ggagcccaggctggccgaatgtctcccagccagtttgcccgggtctccagccttgttggg
agtccccttccctctgtgaatcccaagctgctccagggcagagttgggcagatgatgtct
ccggccagcgggtttcgtgccttcttcggggctccccctgctccacctccatcccagcca
cagcacccaccgggccctggatcccacctgcagagcctgaggccgcagccgcagatgttc
cggccagacacgacccaccttcacccccagcatcgccgcctcctgcaccagcggcagcag
cagaaccggaaccagcaccggagcctcaacggctcagtaggggaccgagggggccaccgg
agcagccaccaggagcagatgcgcaaagacccctacgccaacctcatgctgcagcgggag
aaggactgggtgtccaagatccagatgatgcagctgcagagcactgatccctacctggat
gactattactaccagaactacttccagaagctggagaagttgtcagcagctgaggaagtc
cagggtgatggtcccaaaaaggaacgcactaaactcatcacgcctcaggtggcaaagctc
gagcacacctacaagccagtgcagtttgagggctcactagggaagctcacagtctccagc
gtgaataacccccggaagatgatagatgcggtcgtgacctcccgcagtgaggatgatgag
acgaaggagaagcaggttcgagacaagaggcgccagacccttgttacgattgagaagacg
tacagccttctcctagacgtggaagactacgagagacgctacctcctgagcctggaaggc
gagcggccggccctcatgggcgagaggaagcagaagatatgtgacatgtatgacaatctg
agggggaaggcacccgggcaggagaggccgagcgatgaccatttcatccaaatcatgtgc
atccggaaaggaaaacgcctcgtggcccggatcctccccttcttgtcaccagaacaagca
gctgatgtactcatggcaacagccaggaacctgcccttcctcatcaagaaggatgctcag
gacgaggtgctgccctgcctgctgaggcccttctctcatgttctctatcaccttcccttg
gggacggtcaccagccttgtgcagcagctaacgaacctacctcagagcgcgactgcgcca
gcacccaccaacctgcacctcactgctgtgctccaaaacaagttcggcctgtccctgctg
tacttggtcctgagccgtggggaggaactgcagagctcggatgcgaacacggagctaatg
caggacaaccagtggacggagctgatgctcatggcaacccgggagctgctgcggatcccc
caggtggccttggcgaagccagtgtccaccccctcgaacctgatctccctcttctctcgc
tacgttgaccagcagaagctgaacttgctggagacaaaattgcacttagtgcacgggatc
cggtag
DBGET
integrated database retrieval system
