KEGG   Struthio camelus australis (South African ostrich): 104151149
Entry
104151149         CDS       T08512                                 
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
scam  Struthio camelus australis (South African ostrich)
Pathway
scam03040  Spliceosome
scam04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:scam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104151149 (PRPF19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104151149 (PRPF19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:scam03041]
    104151149 (PRPF19)
   04121 Ubiquitin system [BR:scam04121]
    104151149 (PRPF19)
   03400 DNA repair and recombination proteins [BR:scam03400]
    104151149 (PRPF19)
Enzymes [BR:scam01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104151149 (PRPF19)
Spliceosome [BR:scam03041]
 Complex B
  Other components
   Prp19 complex
    104151149 (PRPF19)
 Complex C
   Prp19-CDC5 complex
    104151149 (PRPF19)
Ubiquitin system [BR:scam04121]
 Ubiquitin ligases (E3)
  U-box type E3
   104151149 (PRPF19)
DNA repair and recombination proteins [BR:scam03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    104151149 (PRPF19)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_WDHD1_1st Prp19 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_Aladin Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_NOL10_N CFAP251_N NBCH_WD40 Beta-prop_HPS5 ASA1 Beta-prop_Vps41 Beta-prop_WDR41 PAC11 Beta-prop_DCAF4 PEP5_VPS11_N WDR90_beta-prop_4th U-box WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_Nup120_160 PROPPIN Beta-prop_ACSF4 Cytochrom_D1 Beta-prop_DCAF12 RMC1_N Beta-prop_WDR35_TULP_N TRM82_WD Alpha_humulene_synt DUF1830 zf-Nse CCDC13 ATG16 GP3 Cep57_MT_bd
Other DBs
NCBI-GeneID: 104151149
NCBI-ProteinID: XP_009684051
Ensembl: ENSSCUG00000013502
LinkDB
Position
Unknown
AA seq 505 aa
LPSFLHTVSNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLIDIKVAH
PIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIAR
LTKEVTAAREALATLKPQAGLIVPQTVPSSQPNVAGAGEAMDLGELAGMTPEIIQKLQDK
ATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILT
GGADKNVIVFDKTSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCV
QVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRILTKVTDESSGCALTCAQFH
PDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLW
DLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTT
GVAFGHHAKFIASTGMDRSLKFYSL
NT seq 1518 nt   +upstreamnt  +downstreamnt
cttccttcctttcttcatacagtttctaacgaggtgcctgagcacccctgcgtgtcacca
gtctccaaccatgtctatgagcgcaggctgatcgagaagtacattgcagagaatgggacc
gaccctgtaaacaaccagcctctctcggaggagcagctcatagatatcaaagtcgcccac
ccaatccgacccaagccgccatctgctactagcataccagccatcctgaaagccctccag
gatgagtgggatgctgtcatgctgcatagcttcaccctccgtcagcagctgcagactaca
cgccaggagctgtcccacgcactctaccagcacgatgctgcctgccgtgtcattgctcgg
ctcaccaaggaggtcaccgcggccagagaagccttggcaactctgaaaccccaggctggc
ctcatcgtgccccagacggtgccatcctcccagccaaatgtggcaggtgctggggaggcc
atggatctgggagagcttgcgggcatgacccccgagatcattcagaagcttcaagacaag
gctacggtgctgaccacggagcgtaagaagagagggaagacggttccagaggagctggtg
aagccagaggagctcagcaagtaccggcaggtggcttcgcacgtggggctgcacagtgcc
agcatcccagggatccttgccctggacctctgtccttccgacaccaacaagatcctcact
gggggggctgataaaaacgttattgtctttgacaagacttcggagcagatccttgcaacg
ctcaagggacactctaagaaggttaccagtgttgtgttccacccatctcaggacttggtg
ttctcagcttctcctgatgctactatccggatctggtctgtgcccaatgcttcctgtgtg
caagttgtccgtgcccatgagggctctgtgacagggctgagtctccatgcaacaggtgac
tacctcctcagttcttctgatgaccagtactgggctttctcggatatccagacaggccgt
atcctcaccaaggtgacggatgagagctctggctgtgctctcacttgtgcccaattccat
ccagacgggctcatttttggaacagggacaatggactcccagatcaagatctgggatctg
aaggaacgtaccaatgtggccaacttcccagggcactcgggccccatcactagcattgcc
ttctccgagaatggctactatcttgccacggctgcagacgactcctctgtcaagctctgg
gacttgcgtaagctcaagaacttcaagacattgcagctggacaataactttgaggtgaag
tctctcatttttgaccagagcggtacctacctggccctgggagggacggatgttcagatc
tacatctgcaagcagtggacagaaatcctccacttcacagaacacagcggcctcaccaca
ggagtggcttttggccaccacgccaagttcatcgcctcaacgggcatggaccggagcctg
aagttctacagtctgtaa

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