Struthio camelus australis (South African ostrich): 104151163
Help
Entry
104151163 CDS
T08512
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04510
Focal adhesion
scam04512
ECM-receptor interaction
scam04518
Integrin signaling
scam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104151163 (COL6A3)
04518 Integrin signaling
104151163 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104151163 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104151163 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scam04147
]
104151163 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
scam00536
]
104151163 (COL6A3)
Exosome [BR:
scam04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104151163 (COL6A3)
Glycosaminoglycan binding proteins [BR:
scam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104151163 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
104151163 (COL6A3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
fn3
HTH_74
Motif
Other DBs
NCBI-GeneID:
104151163
NCBI-ProteinID:
XP_009684079
Ensembl:
ENSSCUG00000013629
LinkDB
All DBs
Position
Unknown
AA seq
3006 aa
AA seq
DB search
MRKYRHLPFGAILCLLLSGFCRVDSQQQAAQESADLIFLIDGSNNIGSVNFQAIRDFLVN
LIESLRVGAQQIRIGVVQYSDQPRTEFALNSYPTKADVLAAVKALSFRGGEEANVGAALE
FVVENLFTQAGGSRIEEAVPQILVLISGGESSDDIREGLLAVKQASIFSFSIGVLNADSA
ELQQIATDGSFAFTALDIRNLDALQELLLPNIVGVAQRLILLEAPTIVTEVIEVNKKDIV
FLIDGSTTLGTAPFNVIRDFVAKIVQRLEVGPDLIQVAVAQYADTVKPEFYFNTHQNRKD
VMANVRRMKLMGGTALNTGSALDFVRTNFFTSAAGCRMEEGVLPMLVLITGDKSRDAVDQ
AAAEMKRNRIVILAIGSRNADMAELQEIAHERDFVFNPNDFRLQFMQAILPEVLSPIRTL
SGGMIIQEPPPVQVTKRDIIFLLDGSLNVGNANFPFVRDFVVTLVNNLDVGSDKIRVGLV
QFSDTPKTEFFLYSYQTKSDIIQRLGQLRPMGGSVLNTGSALNFVLSNHFTEAGGSRINE
QVPQVLVLVTAGSSADPFLQVSNDLARAGVLTFAVGVRNADKAELEQIAFNPRMVYFMDD
FSSLAALPQELNKPITTYVSGGVEEVPLAPTESKKDILFLIDGSANLLGSFPAVRDFVHK
VISDLNVGPDATRVAVAQFSDTIQVEFDFTELPSKQDMLLKVKRMKIKTGKQLNIGAALD
EVIRRLFVKEAGSRIEEGVPQFLVLLAAGKSTDDVEQPSDALKQSGVVTFAIKAKNADPS
ELERIVYAPQFILNVDSLPKISELQPNIVNLLKTIQLQPTVVERSEKKDVVFLIDGSDGV
RRGFPLLKTFVQRVIESLDIGRDKIRVAVAQYSNVIRPEFLLDAYEDKADLINAVQGLTV
MGGSPLNTGAALDYLIKNVFTVSSGSRIAEGVPQFLILLTADRSQDDVRRPSVVLKTSGT
VPFGIGIGNADLTELQTISFLPDFAISVPDFNQLDSVQQVVSNRVVRLTKKEIESLAPDL
VFTSPSPAGVKRDVVFLIDGSRYAAQEFYLVRDLIERIVNNLDVGFDTTRISVVQFSEHP
RVEFLLNAHSTKDEVQSAVRRLRPQGGQQVNVGEALEFVAKTIFTRPSGSRIEEGVPQFL
VILSSRKSDDDLEYPSLQVKQVGVAPLVVVKTVDSEEMTQISLTPDYTFQVSSFQELPSL
EQKLLTPIETLTEDQIRQLLGDVPTTPDISGDEKDIVFLIDSSDNVRSDGLAHIRDFIGR
IVQQLEVGPNKVRIGVAQFSNNVSPEFYLKTHKTKNTVLQAIRRLRLKGGSPVNAGKALD
YVVKNYFIKSAGSRIEDGVPQHLVVFLGDRSQDDVNRPANVITSTSIKPLGVGARKVDRG
QLQVITNDPGRVLVVQDFTELPTLEKTVQNILEELPIPTTETPGILGPGGKKQADIVFLL
DGSINLGRDGFQEVIQFVYSVVDAIYEDGDSIQVGLAQYNSDVTDEFFLKDYSTKPQILD
AINKVIYKGGRVANTGAAIKHLQAKHFVKEAGSRIDQRVPQIAFIITGGKPSDDGQTASL
GIAQKGVKVFAVGVRNIDLEEVSKLASESATSFRAATAQELSELNEQVLVTLAAAMQEKL
CPGTTDVTRDCDVDVILGFDVSDVGAGQNIFNSQRGLESRVESVLNRITQMQKISCTGSQ
APNVRVAIMAQARGGPIEGLDFSEYQPELFERFQGMRTRGPYFLTADTLKSYQNKFSSAP
SGSTKVVIHFTDGADDSMDQLEAASAALHREGVNALVFVGLDRVKNFDEVMRLEFGRGFT
YNRPLRVNLLDLDFELAEQLDNIAERTCCGVPCKCSGQRGDRGVPGPIGPKGATGDIGYG
GYPGDEGGPGERGPPGVNGTQGFQGCPGQRGTKGSRGFPGEKGELGEMGLDGIDGEEGDK
GLPGSSGEKGYSGRRGDKGIKGEQGERGDRGLRGDPGDSGADNTQRGSRGQKGEIGPMGE
IGLPGASGQDGGVGRKGMAGRRGPIGIKGTKGSLGQAGPDGEQGMRGPQGPPGQLGTPGL
RGEQGVPGPRGGGGPLGTPGERGRIGPLGRKGEPGNPGPRGPNGQQGPRGEMGDDGRDGI
GGPGPTGRKGERGFIGYPGPKGSPGDRGGVGGPGPKGNRGRRGNAGDPGTPGQKGEVGYP
GPSGLKGDKGDSRDQCALVRNIKDKCPCCYGPKECPVFPTELAFAIDTSSGVGREVINRM
KQTVLRVVNNLTIAESNCPRGARVALVTYNNEVTTEIRFADARKKSSLLQQIQNFQATLT
TKPRSLETAMSFVARNTFKRARSGFLMRKVAVFFSNGDTRASPQLNEAVLKLYDAGVMPV
FLTSRQDQALIRALEINNTAVGHAIVLPTSGNQLNETIRRLLTCHICLDVCDPDPICGFG
IQRPVFRDRRAAPTDVDTDIAFIMDSSESTTPLQFSEMKKYISHLVSNLEISSDPKASQH
HARVAVLQQAPYEYETNSSFSPVKTEFSLTDYGSKEKIINYLHNQMTQLYGTRAMGSAIE
HTMAHIFEAAPNPRDLKVIVLMMTGKVKKQELEYLQRVVIDAKCKGYFFVVLGIGRKVNA
KNIYSLASEPNDVFFKLVDKPGELHEEPLLRFGRLLPSFIRSDFAFYLSPEIRKQCEWFQ
GDQLAKNLSHPGHKAVYVAPDVTISRTASTSTPVTASVKPVANTSTRTKTTTAASTTAQT
KAPARTPASTTAQANATVQATASTVVQTKVSSRATTNTTTGSRKRHAAKTNDIQIADITE
NSAKLRWVSPEPSNSYIFDITITLAHDHSLVLKQNLTGTECIIGGLRSGQKYLVVITGYQ
KSQPRVTYTGTFSTKTPPQSKIALANMMLNTEPLEGPESDLPDPCLLDYDMGMQCKDYQV
VWFFDYKNKICSQVWYGGCGGNANRFETEAECISKCLKPSAEKVMQPPPLEKRLSSVTDI
CRLQKDEGTCRNFVLKWYYDTETKSCARFWYGGCGGNDNRFNTQKDCEKVCVPGTINPGA
VTTIGT
NT seq
9021 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatatcgacatttgccctttggggcgatactttgcctcctcctctcaggcttt
tgtcgggttgattcgcagcagcaagcagctcaagagtctgctgaccttattttccttatt
gacggatcaaacaacatcggaagtgtcaattttcaagccatacgtgatttccttgtaaat
ttgattgaaagcctcagagttggagctcagcagatacgcattggggtggtgcagtatagt
gatcaacccagaaccgagttcgctttgaacagctaccccacaaaagcggatgttctggct
gcagtgaaggcgcttagtttccgtggtggcgaggaagctaacgttggtgcagcactggag
tttgtggtggagaacctcttcacccaggcgggaggcagcaggatagaggaagcggtgccg
cagattttagtgctgatcagtggtggagagtctagtgatgatatccgagagggcttgtta
gcggtgaagcaagctagtatattctcatttagcattggggtcctgaatgctgacagtgca
gagctgcagcagattgctactgacggaagcttcgcatttactgccctggatatccgtaac
cttgatgcgcttcaagaattattactgccaaacattgttggagtggcccaaagactcatt
ttgttagaggccccaaccattgttaccgaagttattgaagtgaacaagaaggatatagtc
ttcctgatagatggctcgacaactttgggcactgccccctttaatgtaatccgtgatttt
gttgccaaaatcgtccaaaggctggaggttggacccgacctgattcaagtggcggtggcg
cagtatgctgacactgtaaagccagagttttattttaacacccaccagaacagaaaggat
gtgatggctaatgtgaggagaatgaagcttatgggtggtacggcactcaatacagggtcg
gcgctggactttgttaggaccaacttcttcactagcgctgctgggtgcaggatggaggaa
ggggtacttcccatgctggtgctcatcactggcgataagtctagggatgccgttgaccaa
gccgcagcagagatgaaaaggaacaggatagttatccttgccattgggtcgagaaacgca
gacatggcagaactgcaagaaattgcccatgagagagattttgttttcaacccaaacgac
ttccgccttcagttcatgcaagccattcttcctgaagttctgtcgcctatacggacacta
tctggaggaatgattatccaagaaccgccaccagttcaagtaaccaaaagggatatcatc
tttcttttggatggatcactcaacgtcggaaatgccaacttcccctttgtgcgtgacttt
gttgtgaccctagttaacaaccttgatgtcggaagtgacaaaatacgagttggcttagtg
caatttagcgacactcctaaaactgagttctttctgtactcataccaaaccaaatcagac
ataattcaacgcttggggcagctgaggcccatgggggggtcagtgctgaacactggctct
gcactgaactttgtgctttcgaatcacttcactgaagctggtgggagcagaataaatgaa
caagtgccgcaggtcctagtcctggttacagcagggagctctgctgatccgttcttgcaa
gtttccaatgacttagctcgggccggagtgctgacttttgctgtcggagttaggaatgcg
gataaggcagagcttgaacagattgcatttaatccaagaatggtatattttatggatgat
ttcagttctctggcagctttaccccaggaattaaataagcccataacaacctatgttagt
ggaggtgtggaagaggttccactcgccccaacagaaagcaagaaagatattttattcctg
attgatggttcagccaacctcttgggtagctttcctgccgtccgggactttgtgcacaaa
gttatttctgacctgaacgtgggtcccgatgccacccgagtagcagtagctcaattcagt
gacaccatccaagttgaatttgactttactgaactcccatctaagcaagacatgcttctg
aaagtcaaaaggatgaagataaaaaccggaaagcaactgaacattggtgctgcactagat
gaagttatacgaaggttgtttgtgaaggaagctgggagcaggattgaggaaggggttcct
cagtttttggtgctgcttgctgctggaaaatcaacggatgatgtggaacaaccatcagat
gcactgaagcaatctggagttgtgacctttgctatcaaagccaaaaacgcagacccctca
gagctggagaggatagtttatgccccgcagttcattctgaacgtcgactccctccccaag
atttcagagcttcagccaaacatagtgaacctattgaaaactatccagcttcagccaaca
gtcgtggagagaagtgagaagaaggatgtggtgtttctaattgatggctcggatggtgtc
agaagaggtttccctctactgaagacctttgtccaaagagtcattgaaagcctggatatt
ggccgtgacaagatccgtgttgccgttgcgcagtacagcaatgtcataagacccgaattc
ttactcgacgcctatgaagacaaagcggatttaatcaacgccgttcaggggctgacggtt
atgggagggtctcctctgaacacaggagcagccctggactatctcatcaagaacgtgttc
acagtgtcaagcgggagcaggatagccgagggtgtccctcagttcctgattctgctgact
gctgaccgctcccaggatgatgtgaggaggccttccgtggtcctgaagacgagcggcaca
gtgccctttggcattggaattggaaatgctgacctcacagagctacagactatttccttc
ctcccagattttgctatttctgtgcctgacttcaaccagctggattcagtgcagcaggtt
gtgtccaacagagtcgtccgactaaccaagaaagagatagagtcactagcccctgacctg
gtttttacatcacccagcccagcgggtgtgaagagagatgtcgtgttcctcattgatggc
tcccggtatgctgcccaggagttctacctggttcgtgatttaattgagaggatagtgaac
aacctggacgtgggctttgataccacccggatttcagtggtccagttcagcgagcatccc
cgtgttgagttcctgctcaatgctcactccaccaaggacgaggtgcaaagtgccgtgaga
cgactgcggccacaggggggccagcaggtcaatgttggggaggcccttgaatttgtggca
aaaactatcttcactcggccctctgggagccgcatagaggagggcgtccctcagtttttg
gtcatcctctcctcccgcaagtccgatgacgacttagaatacccttcactccaagtcaaa
caagtcggggtggcacctctggttgttgtaaagactgtggattctgaggaaatgacacag
atttcccttactcctgattatacattccaagtgtctagcttccaagaattgcccagcctt
gaacagaagctgctgacccctattgaaaccctcactgaggaccaaatccgacagctcctg
ggagatgttccaaccaccccagatatttctggtgatgaaaaggatatagttttcctcatt
gatagctctgacaacgttaggtctgatgggcttgcccacattcgggatttcattggcaga
attgttcagcagctcgaagttgggccaaataaagtgagaattggagtggcacagttcagc
aataacgtgtcccccgagttctacctgaaaacccacaaaaccaaaaatactgtcctgcaa
gccatccgccgcttgaggctcaaaggaggatcccccgtgaacgccggcaaagccctagac
tacgtagtgaagaactacttcattaagtctgcagggagcaggatagaagatggagtgccc
cagcatctagttgtcttcctcggagacaggtcccaggatgacgtgaacagacctgctaac
gtgatcacctcaactagcattaaacccctgggtgtaggagcaaggaaggtagacaggggt
cagctgcaggtcattaccaatgatcctggccgcgtacttgtagtacaagattttacagaa
ctcccaactttagaaaagacggtccagaatatccttgaagaactccccatacctacaaca
gaaacccctgggattttaggacccggtggtaaaaagcaggctgacattgtattcttgcta
gatggctccattaatttagggagagatggtttccaagaagttatccagtttgtgtattca
gtagtggacgccatttatgaggatggcgattccatccaggtaggactggcccagtacaac
tcagacgtcactgatgaatttttcctcaaggactactccaccaagccccagattttagat
gccatcaataaagtgatctacaaaggaggtcgggtggcaaacactggtgcagccatcaag
catctccaggcaaaacacttcgtgaaggaagctggcagcagaatcgatcagagggtacct
cagatcgccttcatcatcacaggagggaaaccttcagatgacgggcagaccgcctcccta
ggaatagcgcagaaaggtgtcaaggtattcgcagtcggcgtgagaaacattgacctggag
gaagtgagcaagctggccagcgaaagtgccacgagtttcagagcggcgacagctcaggag
ctgtctgagctgaacgagcaagttttggttacactggctgccgctatgcaggagaaactg
tgcccaggaacgacagatgttacaagagactgcgacgtagatgtgatacttggcttcgat
gtctcagatgttggggctgggcaaaatatattcaattcccagagagggctggagtcccga
gtagagtctgtgctgaacagaataacccagatgcagaagatcagctgtacagggagccag
gcaccaaacgtaagggtggcaatcatggcccaggctcgcgggggacccattgaagggctg
gacttctccgagtaccagccagagctgttcgagcggtttcaaggcatgcgcacccgggga
ccctatttcctcacggcagacactctgaaatcctatcagaacaagttcagctctgccccc
tctggcagcaccaaggtggtaatccactttactgatggtgctgatgattcaatggatcag
ctggaggctgcttcggctgctttgcatagagaaggtgtcaacgctcttgtctttgttggc
ctggacagagtgaaaaattttgatgaagtgatgcgattagagttcggacggggtttcacc
tacaacaggcctctcagagttaatctgctggacttggactttgagttggcagaacaactt
gacaacattgcagaacggacatgctgtggggtcccatgcaaatgctctgggcagcgggga
gacaggggagtgccaggccccataggaccaaagggtgctacaggtgatatcggctacgga
ggctatcctggtgatgaaggaggaccgggtgagcgtgggccaccgggtgtcaacgggaca
caaggtttccagggatgccctgggcagagaggaacaaaggggtctcgtggattcccagga
gagaagggtgaactaggagaaatgggcctggatggcattgatggagaagagggagataaa
ggtttgccaggctcctctggagagaagggatactccggcaggaggggtgataagggaatt
aaaggtgaacaaggagaacgaggtgatcgtgggctccgtggagatccgggagattcagga
gctgataatactcagcggggatccagaggccaaaagggtgaaattggaccgatgggagaa
attggactccctggggcaagcggtcaagacggtggagtcggaaggaagggtatggcagga
cgaaggggaccgataggaattaaaggtaccaaaggctcacttggtcaagcagggccggat
ggagaacaaggcatgagagggccacagggtcctcctggtcagcttggcacaccaggtctg
agaggagagcagggagttcctgggcccaggggtggtggaggcccactgggaacaccagga
gagcggggcaggattggtcccctgggaagaaagggtgaacctggaaaccctggacccaga
gggccaaatgggcagcagggaccccgaggagagatgggtgatgatggacgagatggaatt
ggtgggcctggtcctacaggcagaaagggcgaacgaggcttcataggctacccaggcccc
aagggttcacctggtgaccgtggtggtgttggaggccctggccctaaaggaaacagaggc
cgcagaggaaatgcaggagaccctgggacacccggtcagaaaggagaggttggatatcct
ggaccgtctggacttaaaggtgataaaggagactccagagatcaatgcgcccttgtccgg
aacatcaaagacaaatgcccttgttgctatggtcccaaggagtgccccgtcttcccaact
gagctggcgtttgctatcgacacctcctcaggcgtcgggagggaagttatcaacaggatg
aagcaaaccgtgctcagagtggttaacaacttaaccattgccgagagcaactgtccccgg
ggtgcccgggtggcactggtcacctacaacaacgaggtcaccaccgagatccgcttcgct
gatgccaggaagaaatcaagcctcctccagcagattcaaaacttccaagcaaccctgacc
acaaaaccccgcagcctggagactgccatgtccttcgtggccaggaataccttcaagcgt
gcccgaagcgggttccttatgaggaaggtggctgtatttttcagcaacggggacacgaga
gcctccccgcagctcaatgaggcagtgctgaaactctatgatgccggggtcatgcctgtg
ttcctcaccagcagacaggaccaggctctcatcagagctctggagatcaacaacacggca
gttgggcatgcgatcgttcttccaaccagcggcaatcagctgaatgaaactatcaggaga
ctcttgacttgtcacatttgtctggatgtgtgtgaccctgaccccatctgtggctttggt
attcagagacctgtgttcagagacagaagggcagccccaacagatgtagacactgacata
gccttcatcatggatagctcagagtctacaacccctctgcagttcagtgagatgaagaaa
tacatttcccaccttgtaagtaacctggaaatcagctctgatccaaaagcatctcagcac
catgcaagagttgcagttctccagcaagctccttatgaatatgaaaccaattcaagcttc
tcaccagtaaaaacggagttttcactaactgattatggatccaaagagaagatcattaat
tacctgcacaatcaaatgacccagctctatggcacaagggctatgggaagtgcaattgaa
cacacaatggctcatatttttgaagctgcaccaaaccctcgggatctaaaagtcatagtt
ctgatgatgactggaaaagtgaaaaaacaggaactcgagtacctgcaaagggttgttatc
gacgccaaatgcaaaggctatttctttgttgtcttgggaattggcaggaaggtgaatgcc
aagaacatctacagcctagccagcgagcctaacgatgtgttcttcaagttggttgataaa
ccaggagagctgcatgaagagcccttactacgctttgggagactgctgccatcttttatc
agaagtgactttgctttctacctatctccagagataaggaagcagtgtgagtggttccag
ggtgatcagctagccaagaacctcagtcaccctgggcacaaagcagtatacgtggcgccc
gacgtgactataagcagaactgcaagtaccagcaccccagtaactgccagcgtcaagcct
gttgcaaataccagcacccgcaccaaaaccaccaccgctgcaagcaccactgcccagacc
aaagccccagcccggaccccagcgagcaccacggcccaggcgaacgccactgtacaggcc
acagcaagcaccgtggtccagaccaaagtctccagccgggccacgacaaacaccaccaca
ggcagtaggaaaagacacgctgcaaagacaaatgacatccagatcgcagatatcactgaa
aacagtgccaagttgcgctgggtcagcccggagccttcaaactcttatatttttgatatc
accatcaccttagcacatgaccactctctagtcctgaagcaaaacctaactggcactgag
tgcatcatcggaggcctcaggagcggacagaaataccttgtagttattactggctaccag
aaatcccagcccagagtgacctacacaggaacattcagcacaaagaccccgccacagtcc
aagatagccctggccaacatgatgctgaacactgagccgctggaagggcctgaaagtgat
ttgccagacccttgcttgctggactatgacatgggcatgcagtgcaaggactatcaggtt
gtgtggttctttgactacaaaaacaagatctgcagccaggtttggtatggtggctgcggt
ggtaatgccaatagatttgagactgaagccgaatgcattagcaaatgcttgaaaccatca
gctgagaaagtaatgcagccgccaccccttgagaaaagattatcatcagtcacagatatc
tgccggctgcaaaaggacgaggggacctgcaggaacttcgtgctcaaatggtactacgac
accgagaccaagagctgcgccaggttctggtacggtggctgcggaggcaacgacaacagg
tttaacacgcagaaagactgtgaaaaagtttgcgttcctggtaccattaaccctggcgct
gtgacgacaataggaacatag
DBGET
integrated database retrieval system
