Struthio camelus australis (South African ostrich): 104151373
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Entry
104151373 CDS
T08512
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104151373 (HTT)
04131 Membrane trafficking [BR:
scam04131
]
104151373 (HTT)
03029 Mitochondrial biogenesis [BR:
scam03029
]
104151373 (HTT)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104151373 (HTT)
Membrane trafficking [BR:
scam04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
104151373 (HTT)
Mitochondrial biogenesis [BR:
scam03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
104151373 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
104151373
NCBI-ProteinID:
XP_009684466
Ensembl:
ENSSCUG00000015693
LinkDB
All DBs
Position
Unknown
AA seq
3096 aa
AA seq
DB search
MATMEKLMKAFESLRSFQQQQGPAAIPEEPLQRPKKELSTTKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI
KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK
IMAAFGNFANDNEIKVLLKAFVANLKSSSPTIRRTAAGSAVSICQHSRRMQYFYAWLLNV
LLGLLVPVDDDPPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL
IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTASGGIAQVSVSRDESASR
NRSGSIVELIAGGGSSCSPVLARKHKGKILLGEEEGLEDDSETRSDVSSASFAASVKGEI
SSELASSSGVSTTGSVVSSAADPTGHDIITEQPRSQHTLQSDSVDLTSCDLTSTATEGEE
DDVLSRSSSQISAVQSDPTMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGT
ESQYSGMQIGQLQDEEDEAANILQDDSSESFRNSSIALQQPHLLKTMSHSRQPSDSSVDK
FTSKEDAADPGDHENKPSRVKGDIGHYTDGNSAPLVHCVRLLSASFLLTGEKGALVPDRD
VRVSVKALAVSCVGAAVALHPESFFSKLYKTPLEAMGEEYEEQYVSDILNYIDHGDPQIR
GATAILCGTIVNSILIKSRFDVEKWLTTIRSLTGNLFSLVDCIPLLQKMLKDESSVTCKL
ACTAVRHCIMSLCSSSYSELGLQLVVDLLTLRNSSYWLVRTELLETLAEVDFRLVNFLER
KTDSVHRGVHHYTGLLKLQERVLSNVVICLLGDEDPRVRHVAAASLMRLVPKLFYNCDQG
QADPIVAVARDQSSVYLKLLMHETQPPSHFAVSTITRTYRGYNMLQGPTDVTMENNLSRV
IAAVSHALTTSTTRALTFGCCEALCLLSTTFPVCTWSMGWHCGVSQPSPSDEAQKGCTIG
MAGMVLSLLSSAWFPLDLSAHQDALILTGNLLAASAPKCLKNPWSAEEDSNQGAAKQEEP
WPALADRTLVPLVEQLFSHLLKVINICAHVMDDVAPGPAAKAALPSLTNPPSLSPIRRKG
KERESVEQASVPMSPKKGGETSPATRQTDASGPVPTSKSSSVGSFYHLPSYLKLYDVLKA
THANYKVTLDLQNSNEKFGCFLRSALDVLSQILEFATLQDIGKCVEEILGYLKSCFNREP
TMATVCVQQLLKTLFGTNLASQYDGLSSNPSKSQGKAQRLGSSNLRPGLYHYCFMAPYTH
FTQALADASLRNMVQAEQEHDASGWFDVLQKVSTQVKTSVTSVTKHRADKNAIHNHIRLF
EPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVG
QFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPI
VHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKR
LSRQIADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMAS
VSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQAINRLRRGENNVSTLE
DRTEVKQAKYLPEETFSRFLLQLVGILLEDIVTKQVKVDMNEQQHTFYCQELGTLLMCLI
HIFKSGMFRRITAAATRLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCQILLLVN
YTNYSWWSEVHQTPKRHSLSTTKLLSPQISGESDESDSESKRGMCNREIVRRGALILFCD
YVCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENL
AAPTTLKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAATL
QNSITQLPVEELDRIQEYLQNSGLAARHQRLYSLLDRFRLMVAPDTASPSPLVTSHPLDG
ENQPPLENVILDKDWYVSLVRSQCCIKSDSALLEGAELVNRIPEPELNSFMTSKEFNLSL
LAPCLSLGMNEISRDQKSSFFETARRVTLDHVSTIVQNLPAIHQVFQPLLLAEPSAYWKK
LSDIFGDEVTYQSTMTLCRALAQYLLLLSKLPAGLRVPPDKEGDILKFVVMSVEAISWHL
IHDQIPLSIDLQAALDCCCLTLQQPSLWNLLASAVNVTYACSLINCIRFIIEAVAVEPGN
QLLSPERKKNTSKGLSEVEVDSNTQRTKHIAAACEMVAEMVECLQTVLALGHRRNSSIPA
FLTPVLKNIIISLARLPLVNSYTRVPPLVWKLGWSPKPAGDFGTVFPEIPVEFLQEKEIF
KEFIYRINTLGWVSRTQFEETWATLLGVLVTQPIVMDQEESQQEEDTERTQINVLAVQAI
TSLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAMVSKRD
NIATHHLYQAWDPVPSLSPATTGALISHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGN
NITPLREEEWGEDEEDENDMPAPSSPPTSPINTRKHRAGVDIHSCSQFLLELYSQWILPS
NPSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILIQYLIPAT
CKAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPII
SEYLLSNLRGVAHCVNVHNQQHILVMCAAAFYLIENYPLDVGPEFSAGIIQMCGVMVSGS
DESTPSVIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCM
YTGKEKISPSRTADANPAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDD
FFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHTTGQSSMVRDWVMLSLSNFTQR
TPVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDINIFCLVAIDFYRHQIDEE
LDRRAFQSVFEVVASPGTPYHRLLTCLQSVHKITAC
NT seq
9291 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctgatgaaagccttcgagtcgctgcgctccttccagcagcag
caagggccggctgctatccccgaggagccgctccagagaccaaagaaagaactttcaact
accaagaaagatcgagtgaatcactgcctgacaatatgtgaaaacatagttgctcagtct
ctaagaaattctccagaatttcagaaactgctggggattgctatggaactcttcctcctt
tgcagcgaggatgcagaatctgatgtccggatggttgctgatgaatgccttaataaagtt
attaaagctttgatggattcaaatcttcctaggttgcaattagaactgtataaagaaatt
aaaaagaatggtgcttcccgaagtctacgtgctgcactctggagatttgctgagcttgcc
catctggttcggccacaaaagtgcaggccctacctggtgaacctattgccctgtctaaca
cgaataagtaagaggcctgaagaatcagtacaagagacactagctgcggcgataccaaaa
atcatggcagcgtttggcaattttgcaaatgacaatgagattaaggttttgttgaaggct
ttcgtagctaatcttaaatccagttccccaactatacgtcgaacggcagcaggatcagca
gtaagcatctgtcaacattctcgaagaatgcaatatttctatgcctggttactgaatgta
cttttaggcttgttggttcccgtagatgatgatcctcctactcttttaattcttggtgtg
ttgcttacactaagatatctcatacctttgttgcaacaacaagtaaaggataccagcctg
aaaggcagctttggtgtaacaagaaaggagacagagatttcaccttcaccggaacagctt
atacaggtttatgaattgactctgcattacactcagcatcaggaccacaatgttgtaact
ggagctttagaattattacagcagctctttagaacgccaccacctgaacttctgcacgcc
ctgaccgcttctgggggcattgcacaggtcagtgtatccagagatgaatctgccagcagg
aaccgcagtgggagcatagtggaacttatagctggaggggggtcttcatgcagccctgtt
cttgcgagaaagcataaaggtaaaatacttcttggtgaagaagaaggtttggaggatgat
tctgaaactcgatcagatgtcagcagtgcatcttttgcagcttctgtgaaaggtgagata
agcagtgaactggcttcttcatcgggtgtatcgacgactgggtcagtagtcagttcagct
gctgatcctactgggcacgatatcattactgagcagccacgttcacaacacacattgcag
tctgactctgtagacctgacaagctgtgatttgaccagtacagctactgagggggaagaa
gatgatgtacttagccgaagctccagccaaatcagtgctgtccagtcggatcccactatg
gacttgaacgatggtacacaggcttcctcaccaattagcgatagctctcagactactaca
gaaggtccagactctgctgtaaccccttcggacagttctgaaattgttttggagggtact
gaaagccagtattctggaatgcagattgggcagctgcaggatgaggaagatgaggctgca
aatattctccaagatgattcatcagagtctttcagaaattcttcaattgctcttcaacag
cctcacttgctgaaaaccatgagccatagtaggcagccttctgatagcagcgtagataaa
tttacatcaaaagaagatgcagcagatccaggtgatcatgaaaataagccctccagagta
aagggagacataggtcactataccgatggaaattctgcgcctttagtgcactgtgtcaga
cttctgtcagcctcttttctacttactggggagaagggagctttagttcctgatagggat
gtgagagtcagtgtaaaagccctggcagtaagttgtgttggagcagctgttgcccttcac
cctgagtctttcttcagcaaactgtataagacaccccttgaagccatgggagaggagtat
gaagagcaatatgtgtcagatattctgaactacattgatcatggagatccgcagattaga
ggagctactgccattctctgtggaacaattgtcaactctattctgattaaatcccgcttt
gatgtggaaaagtggctaacaactatcagaagcttaacaggaaatctcttttccttggta
gactgtatacctttgttacagaagatgctgaaagatgagtcctctgttacatgcaaactg
gcttgtacggctgtgaggcattgcatcatgagcttatgtagtagcagttacagtgagcta
ggtttacagttagttgtcgacctccttacgttgaggaatagctcatactggctagtaaga
acagaacttctggaaacacttgcagaggtagattttcgactagtcaacttcttggaaaga
aaaacagacagcgtgcacagaggtgttcatcattatactggtctcctaaaacttcaggag
agagtgctcagtaatgttgtaatctgcctgcttggagacgaagatccaagagtgcgacat
gtagctgcagcttcattaatgaggcttgttccgaagctgttttataactgtgatcaggga
caggctgatccaatcgtggcagtagcgagagatcaaagcagtgtctacctgaagctgcta
atgcatgaaacacagcctccatctcactttgcagtgagcactatcaccagaacatacaga
ggttacaatatgctgcagggtccaacagatgtcactatggaaaacaatctttcaagggtt
attgcagcagtttcccatgcactgacaacatccactacaagagcacttacgtttggctgc
tgcgaagctttgtgccttctctccacaacgtttccagtctgcacctggagcatgggatgg
cactgtggcgtttcccagccaagcccttcagatgaagctcagaagggctgtaccattgga
atggctggcatggtcctctctctcctttcatcagcctggttccctctggacctttctgca
catcaggatgctctgattttgactggaaacttgcttgcagcaagcgctcccaagtgctta
aagaatccctggagtgctgaagaagattctaaccaaggtgctgcgaaacaggaagaaccc
tggccagctttggcagaccgaactcttgttcctttagtagaacagcttttttctcatctg
ctgaaggtcattaatatttgtgcacatgtaatggatgatgttgctcctggcccagcagca
aaggcagcgttaccttctctcacaaacccaccttctcttagtccaatacggaggaaaggg
aaagagagggagtctgtagaacaggcttctgtaccgatgagccctaaaaagggtggcgaa
actagtccagctacgaggcaaaccgatgctagtgggcctgttccaacaagtaaatcatct
tcagtaggaagcttttatcatcttccatcgtatctgaagttatatgatgtcttgaaagct
acccatgctaactataaggtcactttggatctccagaacagtaatgaaaagtttggatgt
ttcttacgctctgccttagatgttctgtctcaaattttggaatttgcaactcttcaagac
attggaaagtgcgtagaagaaattttgggatacctaaaatcatgtttcaacagagaacca
acaatggcaacggtttgtgtgcagcagttattgaagacgttgtttgggacgaacttggct
tctcagtatgatggcttgtcttcaaatcccagcaaatctcaaggcaaagcccagcgctta
ggttcttctaatttgagacctggtctctatcattactgcttcatggcaccgtatacacat
ttcacacaggcacttgctgatgctagtctaaggaacatggttcaggctgagcaagaacac
gatgcttcagggtggtttgatgtgctgcaaaaagtttccacacaggtgaaaactagtgtt
accagtgtaacaaaacatcgtgctgataagaatgctattcacaatcacattcgtttattt
gaaccccttgtcataaaagcattaaaacaatacactacaacaacatcagtgcagctgcag
agacaagttctagacttacttgctcaactggttcagctacgagttaactactgtcttctg
gattcggatcaggtgtttattggatttgtgttaaagcagtttgaatacattgaagtagga
cagttcagggagtctgaagcaattattcccaatatcttttttttcttggtattgctgtct
tatgagcggtatcattcaaaacagataattggaattcctaagattattcagctgtgtgat
ggtatcatggccagtgggaggaaagctgttacacatgcaataccagctctgcaacccatc
gttcatgatctctttgtgttaagaggaacaaataaagctgatgctggaaaagagttggaa
acacaaaaggaggtggtagtgtcaatgctgctgagacttattcagtaccatcaggtgcta
gaaatgttcatcttagtattgcagcagtgtcataaagaaaatgaagacaaatggaaaaga
ttgtcccggcaaatagctgacattattcttccaatgcttgcaaagcaacagatgcatata
gattctcatgatgctttgggagtactgaacactttatttgaaattttggctccttcatct
cttcgcccagtggacatgcttttaaggagtatgtttgttactcctaaaacaatggcatca
gtgagcactgtccagttatggatttctggaattttagctatccttagagttcttatttca
cagtcaacagaagacatagttctatcccgtattcaagagctttccttctccccatatttg
atttcctgtcaagcaattaacagactgaggcgtggagaaaataatgtatccacactagag
gatcgcactgaggttaagcaggcaaaatatttgcctgaagagacattttctaggttctta
ctacaactggttggcattctactggaagacattgttaccaaacaagtgaaagtggacatg
aatgagcagcaacacactttctactgtcaggagttgggcacgctgcttatgtgcttaata
catatcttcaaatcagggatgtttagaagaatcacagctgcagccaccagactttttaca
ggagatggatctgatggtagtttttataccctcgaaagtttgagtgatcttgttcagtcc
atgattcccacacatccttctttagttcttctctggtgtcaaatcctgcttcttgtcaat
tataccaactacagctggtggtcagaagtgcatcagactccaaagagacacagtctttct
actacgaaattgctcagccctcagatatctggagagagtgatgaatcagattcagaatct
aaacgtggcatgtgcaatcgagagatagtgagaagaggcgcgctcattctcttttgtgat
tatgtttgtcaaaacctgcatgattcggaacacttgacctggcttattgtgaaccatgtt
caagacttgattaatctgtcccacgagcctccagtacaagactttattagtgctgttcac
aggaattcagcagccagtggtctctttattcaggccattcagtcacggtgtgagaatctt
gcagcgcccacaactcttaagaagacgctacagtgcctagaggggatacatctcagccag
tctggggctgtcttaacgttatatgttgataagcttctgtgtactccgttccgtgtgctg
gctcgtatggtagacacactggcttgtcgtcgggtagaaatgcttttggctgcaacttta
cagaacagcattactcagttaccagttgaagaactagatagaattcaggaataccttcaa
aacagtggattagcagcaagacaccaaaggctttactcgctcttggacagatttcgtctt
atggtagcaccagacacagctagtccttcgcctctggttacctcacatccattagatgga
gaaaaccaaccacctttagagaatgtaattctagacaaagactggtatgtgtcactagtg
agatcgcagtgttgcatcaagtctgattcagcactactagaaggtgcagagctggtaaat
aggattcctgagcccgaactgaactccttcatgaccagcaaggaattcaacttaagcttg
ctagctccttgtttaagccttggcatgaatgaaatctcaagagatcagaagagcagcttc
tttgaaacagcccggagggtaactctggatcatgtgtctaccattgtacaaaaccttcct
gccattcaccaggttttccagccgttgttgctcgctgagccgtcagcctactggaaaaag
ctaagcgatatctttggagatgaggtgacgtaccagtctacgatgacgctttgtcgtgcg
ctggctcagtatttgttgttactctcaaaactaccagctggtctccgtgttcctcctgac
aaagaaggtgacatcctgaaattcgttgttatgtcagtagaggcgatatcatggcattta
atacatgaccagattccactaagtatagatcttcaggctgctctggattgttgctgtctg
accttacagcagcctagtctttggaatttgctggcttccgcagtaaatgtgacatatgct
tgctccttaattaattgcattagatttataatagaagcagttgcagttgaacctggaaat
caacttcttagtccagagagaaagaagaatacttcaaaaggcctaagcgaggttgaagtt
gattcaaacacacagagaacaaaacacattgctgcagcttgtgaaatggtagctgaaatg
gtggaatgtttacagacagtcctggctttggggcacagaagaaacagcagtattccagca
tttcttactcctgtccttaagaacatcatcatcagtttggcaaggctgcctctagtgaac
agttacacaagagtacctcccttggtctggaaattaggctggtcaccaaagcctgcaggt
gactttggcacagtttttcctgaaattccagtagagtttcttcaagaaaaagaaatcttt
aaagagttcatctatcgcattaatacacttggatgggttagccgtactcagtttgaagag
acttgggctactttgcttggcgtacttgtaactcagcctattgtaatggaccaagaagag
agccagcaagaggaagatacagagaggacccaaattaatgttcttgcagtacaagccata
acttccttggtgctgagcgcgatgaccatacctgttgcaggcaatccggcagttagctgt
ttggaacagcagccccgcaacaaagctttaaaagctctggacacaaggtttgggaggaaa
ctaagtgttatcaggggaattgttgaacaggaaatccaagcaatggtatctaagagagat
aatattgctactcatcacttatatcaagcttgggaccctgttccatcactttctcctgct
actacaggtgctcttatcagccatgaaaaactcctcctgcagatcaatactgaacgagaa
ataggagatatggattataaactgggacaggtctctatacactccatatggttaggaaat
aatatcactccattgagagaagaagagtggggtgaggatgaagaagatgagaatgacatg
cctgctccttcctcaccaccaacctctcctattaataccaggaaacaccgggctggtgta
gatatacattcttgttctcagttcctgcttgagctctatagtcagtggatattgccatca
aatcctagcaagagaacaccagttattttgattagcgaagtggtgcgatcacttctggca
gtgtcagacttatttacagaaaggaatcaatttgagatgatgtatacgacactgacagaa
ttgcgaaaggtgcatccatcagaagatgagatcctcatacagtatttgataccagccact
tgtaaggctgctgctgttcttggaatggataaagctgtggctgaaccagtaagtcgactg
ttggagtcaaccctgcgaagcacccacatgccaagtcggattggagctctacatggaatt
ctgtatattcttgagtgtgatttgcttgatgaaacagcaaagcagctcattccaattatc
agcgagtatctgctctccaatttgagaggagtagcacattgtgtgaatgtccataaccaa
cagcatatcttagtaatgtgtgcagctgcattctatttgatagagaattatccacttgat
gtagggcctgaattctctgcaggaattatacagatgtgtggagtcatggtatctggaagt
gatgaatcaacaccatccgttatttatcattgtgtactgagagggctagaacgactcctt
ctttcggagcaactttctaggctggatagtgaatcactagttaaactaagtgttgacaga
gtgaatgtgcagagtccccacagagcgatggcagcgcttggattaatgctgacttgcatg
tacacaggaaaggaaaaaatcagccccagtcgtaccgcagatgcaaatcctgctgctcct
gacagtgaatctgtgattgtagctatggaacgagtatctgtcctttttgataggatcagg
aaaggatttccttttgaagctagagtagttgcccggatccttccacagttcctggatgac
tttttccccccacaagatgtaatgaataaagttattggagaattcttatccaatcagcag
ccttacccacaattcatggcaacagtagtttataaggtatttcagacactacataccact
gggcagtcttcaatggtccgtgactgggtgatgctgtctctatctaatttcacacaaaga
acaccggtagcaatggcgatgtggagtctttcctgtttttttgtcagtgcttccaccagt
caatggatttcagcaattcttccacatattatcagccgaatgggaaaatctgagcaagtg
gatattaacatcttctgtttggtggccatagacttctaccgacatcagatagatgaagaa
ttagatcgaagggcctttcagtcagtgtttgaggtggtagcatctccaggaaccccgtat
catcgcctactgacttgtttgcaaagtgtccacaagatcacagcctgttga
DBGET
integrated database retrieval system
