KEGG   Struthio camelus australis (South African ostrich): 104151580
Entry
104151580         CDS       T08512                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
scam  Struthio camelus australis (South African ostrich)
Pathway
scam03410  Base excision repair
scam04140  Autophagy - animal
scam04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:scam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104151580 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    104151580 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    104151580 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:scam03036]
    104151580 (HMGB1)
   03400 DNA repair and recombination proteins [BR:scam03400]
    104151580 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scam04147]
    104151580 (HMGB1)
Chromosome and associated proteins [BR:scam03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    104151580 (HMGB1)
DNA repair and recombination proteins [BR:scam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104151580 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     104151580 (HMGB1)
Exosome [BR:scam04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   104151580 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 RNA_pol_3_Rpc31 HMG_box_5
Other DBs
NCBI-GeneID: 104151580
NCBI-ProteinID: XP_009684802
Ensembl: ENSSCUG00000014823
UniProt: A0A093I028
LinkDB
Position
Unknown
AA seq 218 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKF
EDMAKADKLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKVDAGKKVVAKAEM
SKKKKEEEEDEDEDEEDDDDEEHEEEEEEEDEDDDDDE
NT seq 657 nt   +upstreamnt  +downstreamnt
atgggcaaaggtgatcctaagaagccaagaggtaaaatgtcttcatacgccttctttgtg
caaacctgccgggaggagcacaagaagaaacatccagatgcttcagtgaacttttcagag
ttctcaaaaaaatgttcagaacgatggaagactatgtcttctaaggagaaaggaaagttt
gaagatatggcaaaggctgacaagcttcgttatgaaaaagaaatgaaaaactatgtacct
cctaagggggaaacaaaaaagaagttcaaggatccaaacgcaccgaagaggcctccttcg
gcttttttcttgttttgctctgagtttcgtccaaaaatcaaaggagaacatcctggtctg
tccattggggatgttgcaaagaaactgggagagatgtggaacaacaccgctgcagatgat
aaacagccttatgaaaaaaaggctgctaaactgaaggagaagtatgaaaaggatattgct
gcataccgggccaaagggaaggttgatgcaggcaaaaaagtagttgccaaggcggagatg
agcaagaagaagaaggaggaggaggaagatgaggatgaggacgaagaggatgatgatgat
gaagagcatgaagaagaggaagaggaggaggacgaggatgatgatgatgatgaataa

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