Struthio camelus australis (South African ostrich): 104151920
Help
Entry
104151920 CDS
T08512
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104151920 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scam03041
]
104151920 (DHX38)
Enzymes [BR:
scam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104151920 (DHX38)
Spliceosome [BR:
scam03041
]
Complex C
Other components
Step II factors
104151920 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
T2SSE
Flavi_DEAD
PhoH
Microtub_bd
SRP54
AAA_30
AAA_16
SoDot-IcmSS
AAA_7
DUF6449
Sigma54_activ_2
MRP-S31
Motif
Other DBs
NCBI-GeneID:
104151920
NCBI-ProteinID:
XP_009685282
Ensembl:
ENSSCUG00000016910
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MLTSGVVHRLEVDEDFEEDNSAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLA
IIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKKEEEKDEMVTEDGKVDYRT
EQKFAEHMKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGK
TTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSE
NTVIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLV
VTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPG
DILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKC
IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRAGRAGRTG
PGHCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNML
NSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP
AIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKV
REVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHL
HPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQEN
RRRAKEEASLMEEEMALAEQQLRARREEQERRNPLGSARSTKIYTPGRKEQGEPLTPRRT
PARFGL
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccagtggtgtggttcatcggcttgaagtggatgaagactttgaggaggataac
tcggctaaagtgcatctgctggtgcacaacctggtgccccctttcctagatgggaggata
gtcttcaccaagcagccagagccagtcatccctgtcaaggatgccacctcagatttggcc
atcattgctcggaaaggcagtcaactggtgcgcaagcacagggagcaaaaggagcgtaag
agggctcagcataaacactgggaactggcaggcacaaaactgggagacattatggggatc
aaaaaggaggaagagaaggacgagatggtgacggaagatggcaaagtggattacaggact
gagcagaagtttgctgaacacatgaaagaaaagagtgaagcaagcagtgagtttgccaag
aagaaatcaatcctggagcagagacaatatctgcccatttttgctgtgcagcaggagctg
ctctccattctcagggacaacagcattgtgattgtggtgggggagacggggagtgggaag
acaactcagctgacgcagtacctccatgaggatggctacacagactatggcatgattggc
tgcacccagccccgcagagttgcagctatgtcggttgccaagcgagtcagtgaagagatg
ggggtgcgtctgggagaggaggtgggctatgccatccgctttgaggactgcacatcagag
aacacagtgatcaaatacatgacggatgggatcctcctccgtgagtcactgcgagaggct
gacctggaccactacagtgctatcatcatggatgaggcacacgagcgctcgctcaacact
gatgtactctttggcctgcttcgggaggtggtggcccgacgctcagatctgaagcttgtt
gtcacctcggccaccatggatgcagataagtttgcttctttctttgggaacgttcccatt
ttccacattcctgggcgcacgtttcctgtcgacattctcttcagcaagaccccccaagag
gattatgtggaggctgcagtgaaacaagccctacaggtgcatctgtctggtgctcctgga
gacatcctcgtcttcatgcctggccaggaagacatcgaggtgacctcagagcaaattgtg
gagcaccttgaggagctggagaaggcacctgctcttgctgtactgcccatctattctcag
ctaccctcagacttgcaggccaagatcttccagaaggctccggatggggtcaggaagtgt
attgttgccaccaacatcgcagagacctcactgacagtggatggcatcatgtttgtgatt
gactctggctactgcaagttgaaggttttcaacccccgcataggcatggatgcactgcag
atctaccccatcagtcaagcaaatgccaatcagagggcaggccgagcaggccggacaggc
ccaggtcactgcttcaggctctacacccagagcgcctacaagaacgagctcctcaccacg
actgtgcccgaaatccagcgcaccaaccttgccaacgtggtgcttttgctcaagtctctg
ggtgtgcaggacctgctgcagttccacttcatggatccaccccctgaggacaacatgctg
aactccatgtaccagctgtggatcctgggagcgctggataacacaggtggtctgacctct
acgggtcgtcttatggtggagttccccctggatcctgcactctccaaaatgctcattgtt
tcctgtgacatgggttgcagttctgagatcttgctcattgtctccatgctgtctgtgcct
gccatcttctatcggcctaagggccgagaggaggagagcgaccaggtgcgtgagaaattt
gccgtcccagagagcgatcatttgacttacctgaatgtttacctgcaatggaagaacaac
aactactctacgctgtggtgcaaccagcatttcatccatgccaaggccatgcggaaggtg
cgagaagtgcgtgcccagctcaaggacatcatggtgcagcagcggatgagcctggcatcc
tgtggcactgactgggatgttgtcaggaagtgcatctgtgctgcgtatttccatcaggct
gcaaagctgaagggtattggggagtatgtgaacatccgcacaggcatgccctgccacctg
caccccacaagctccctgtttggcatgggctacacaccagactacattgtgtatcatgaa
ctggtcatgaccaccaaggaatacatgcaatgcgtcactgctgtggatggagagtggctg
gcagagctgggccccatgttctacagtatcaaacatgctggcaagtcacgtcaggagaac
cgccgccgtgccaaggaggaagcgtccctcatggaggaggagatggctctagctgagcag
cagctgcgtgcccgccgggaggaacaggagcgccgtaacccactgggcagtgcgaggtct
actaaaatctacacccctgggcggaaggagcagggggagcccctgacaccacgacgcacc
ccagcccgctttggcctctga
DBGET
integrated database retrieval system
