Struthio camelus australis (South African ostrich): 104152032
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Entry
104152032 CDS
T08512
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104152032 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scam03000
]
104152032 (ARID1B)
03021 Transcription machinery [BR:
scam03021
]
104152032 (ARID1B)
03036 Chromosome and associated proteins [BR:
scam03036
]
104152032 (ARID1B)
Transcription factors [BR:
scam03000
]
Eukaryotic type
Helix-turn-helix
ARID
104152032 (ARID1B)
Transcription machinery [BR:
scam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104152032 (ARID1B)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104152032 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
104152032
NCBI-ProteinID:
XP_009685447
Ensembl:
ENSSCUG00000018572
LinkDB
All DBs
Position
Unknown
AA seq
1865 aa
AA seq
DB search
MDPMVMKRPQLYGMGNNPHSQTQQSSPYPGQSYGPPGPQRYPVGMQGRAPAALGGMQYPQ
QQIPPQYGQQGVSSYCQQGQQPYYNQQPQPQHLPPQAQYLSQAQQRYQAQQDMSQEGYGT
RSQPPMAPGKPNHEDLNLIQQERPSSLPGEVLASEDATFGHKDLSGSIDDLPTGTEATLS
SAVSASGSTSSQGEQSNPAQSPFSPHASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPA
SIPGSQMPPQPPGSQSESSSHPALSQSPMPQDRGFMAGIQRNPQMSQYGPQQTGPSMSPH
PSPGGQVHPGIGSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPNTSYSGPGPGMGIN
ANSQMHGQGPSQPCGTMPLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGGPGMGPPMPT
VNRKAQEAAAAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYGSVQAPLMH
QPDQYGQGNFPAMNQSGIMGSSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSTAPMGLA
DMMTPGESKLPLPLKADGKDEGAPQPESKAKDSYSSQGISQPPTPGNLPVPSPMSPSSAS
ISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKMWVDRYLTFME
ERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAASSL
KKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSN
SMTEVPGDLKPPTPASTPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTPNAPYQ
QGINMPDMMARMPYEPNKDPFGGMRKVPGSSEPFMTPGQMPNSGIQDMYNQSPSGAMSNM
SMSQRQQFSYGSGYDRRSDHGLGPEGSMGPPGQSNMVPSNSDPSMYSPNRYPGQQRHEPY
GQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGDMYNMQYGNQQQE
MYNQYSNAYTGPDRRPMQGQYPYPYNRERMQGPGQIQQHGIPPQMIGGPMQSSSSSEGPQ
QNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHVNQRQP
SYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKM
QKVIPTVPVSQVSGPPPQPPPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEAWRVM
MSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILME
YEVGDPGHKALDHKAAKKDDSQPLAEDTGKEENDECIDYFDEDEEEGEDEKVEGEEKSIV
FSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFDSGLLHWQLGGG
DTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKDLEGKGESEEQQEKSITATIDDVLSAR
PGALPEDSNSGSQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDSLAKR
CICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEEEDKG
VACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQ
DPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKN
PVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQP
PPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLF
QIGQL
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatggtcatgaagagacctcagttgtatggaatgggcaataaccctcattct
cagacgcagcagagcagcccgtaccccgggcagtcgtacggccctcccggcccccagcgc
tatccagtgggaatgcagggccgggccccggcagccctgggaggaatgcagtatccacag
caacagataccacctcagtatggtcagcaaggtgtaagcagctactgccagcagggccag
caaccatattacaaccagcagccgcagcctcagcatctgccaccccaggcacagtatctg
tcacaggcccagcagaggtaccaggcgcagcaggacatgtctcaggaaggctatggaacc
agatctcaaccccctatggccccaggaaagcctaaccacgaagacttgaatctgatccag
caagaaagaccatcgagcttaccaggcgaagtcttggcctcggaggatgctacatttgga
cacaaggatttatctggctccattgacgacctgccgactggaactgaagcaacgctgagt
tcagccgttagcgcgtccgggtctacaagcagccagggggagcagagcaaccctgcgcag
tcaccattctcccctcacgcctctccgcatctctctggcatccctggcggtccatcgcct
tccccggtcggctctcccgttggaagcaaccagtcaagatccgggcctatttctccagca
agtattccaggcagtcagatgccaccgcagcctcctggcagccagtcagaatccagctcc
caccctgctttgagccagtcaccaatgccacaggatcgaggtttcatggcaggcatacag
aggaacccccaaatgtcacaatatggacctcaacaaactggaccttccatgtcaccacac
ccttcacctggcggccaagtacatcctggaattggtagctttcagcagagtaattcaagt
ggtacttatgggcctcagatgagccagtatggaccacaaggaaattattccagaccacca
acatacagtggcgtgcccaacacgagttacagtggcccaggacctggcatgggtataaat
gccaacagtcagatgcatggacaggggccaagccagccttgtggtaccatgcccctggga
cggatgccatcagctgggatgcagagcagaccatttcctggaaacatgagcagtatgacc
cccaattctcccggcatgtctcagcagggaggccctgggatgggcccacccatgccaact
gtgaaccgtaaggcacaggaggcggctgctgcagtgatgcaggctgctgcaaactccgct
cagagcaggccaccatacattaggtcgcctgcttatcccagccagtctggggctggcgga
cgccccatgttttcttcacagcaccccaactatggcagcgttcaggctcccttgatgcac
cagcctgaccagtacgggcaaggcaatttccctgccatgaatcagagcggcattatggga
tccagctccccctacactcagccgatgaacaacagctcgggcttgatgaacccgcaggct
cctccttacagcatggcccctaacatggtgaacagttcaacagcacctatgggtcttgca
gatatgatgacacccggtgagtccaaactcccccttcctctcaaagcagacggcaaagac
gaaggagccccgcagcccgagagcaaggcaaaggatagctacagctctcagggtatttct
cagcccccaaccccaggcaacctgccagtcccttccccaatgtccccaagctctgctagc
atctcctcatttcatggagatgaaagtgatagcattagcagcccaggctggccaaagact
ccatcaagccctaaatcaagttcctctaccacaactggagagaagatcacaaaagtctat
gaactaggaaacgagccagagcgcaagatgtgggtagaccggtatctcactttcatggag
gagaggggcacgcctgtggctagtctgccagctgtgggcaagaagcccctggacctgttt
aggctctatgtctgtgtcaaggagattggaggtttagcacaggttaataaaaacaagaag
tggcgtgaactggcaaccaccttgaacgttggcacttcgagcagtgcagccagctccctg
aagaaacagtacattcagtacctgttcgccttcgagtgcaagattgagcgcggggaggag
ccccctccagaagtcttcagcactggagatactaagaaacaacctaagattcagccgcca
tctcctgctaattccggttccttacaaggcccacagactccacagtctactggtagtaat
tccatgacagaagtgccaggcgatctgaagccgccaacaccagcatcaacacctcatgga
cagatgacgcctatgcagggtggcagaaacagtgcagtgagcgtgcatgatcccttttct
gatgtaagcgattcagcgttcccaaaacgaaactccatgacgccaaatgcaccataccag
cagggaataaacatgccagatatgatggcaaggatgccgtatgagccgaataaagatcca
ttcggtggaatgagaaaagtgcctggaagcagtgagcctttcatgacccctggacaaatg
cccaacagcggaatacaagatatgtataaccagagtccatctggagcaatgtccaacatg
agcatgagccagcgacagcagttctcttatggaagtggctatgacaggaggtcggatcat
gggctgggtcctgaaggcagtatgggaccacctggtcaaagcaacatggtgccttcaaac
agtgacccaagcatgtactctcctaatcgttaccctggccagcaaaggcatgaaccatat
gggcagcagtatccaggacaaggacctccctcaggacaaccaccatatggaggacatcaa
cctggaatgtatccacagcagcagaactataagcgacacatggatggcatgtatggacct
ccagccaaacgccatgaaggggatatgtataacatgcagtatggcaaccagcagcaggaa
atgtataaccagtacagcaatgcttacactgggcctgacaggaggcccatgcagggacag
tatccatatccatataaccgggagaggatgcagggcccaggacaaattcagcaacatgga
atacctccccagatgattggtggccccatgcagtcgtcatcctccagcgaaggtcctcag
cagaacatgtggccaacacgaaatgatatgccttatccttaccagaataggcaaggtcca
ggaggccctgcacaggccccaccgtatccagggatgaatcgcactgatgatatgatggta
cctgaccagagaataaaccacgagagtcagtggccttctcacgtcaaccaacgtcagcct
tcttatatgtcatcctcagcctccatgcagcctatcactagacctcctcagtcatcctac
cagacaccaccctctatgccaaaccacatctctagagctccaagtccagcatccttccag
cgctctctggaaaaccgtatgtctccaagcaaatctcctttcctaccctccatgaagatg
caaaaggttatacccacagttccagtgtcacaggtgtcaggacctccaccccaaccacca
ccaattaggcgagaaattaccttccccccaggatccgtagaagcatcgcaaccagtctta
aaaccaagacgaaagattacctcaaaagatattgtaactcctgaggcctggagagtaatg
atgtctcttaagtctggtcttttggctgaaagtacctgggcgctagacactattaatatt
cttctgtatgatgacagcactgttgctactttcaacctctctcagttgtctggatttctt
gagcttttggtagaatattttagaaaatgcctgattgacatttttggaatccttatggaa
tatgaagtgggagatccaggtcacaaagcacttgatcacaaagcagccaagaaagatgat
agccagcctctggcagaggatactgggaaagaggagaacgatgaatgtattgactatttt
gatgaagacgaggaggagggggaggatgaaaaggtagaaggagaagaaaagagcattgtt
ttttccactcctggtgccattgctgatccaagtgagaggccaaaacaagccagtaaattt
gacaagctgccaataaagattgtaaagaaaaataatctgtttgttgttgaccgatctgac
aaacttggacgtgttcaggaatttgatagtggacttctccactggcagcttggtggtggt
gacacaactgagcacatccagactcactttgaaagcaagatggagattcctccacgcagg
aaagcccctcctcccttgaattctccaagcaaaaagaaggacctcgaggggaaaggtgaa
tcggaggaacaacaagaaaaaagtataacagctaccattgatgatgtcctctcagctcgg
ccaggagcattgcctgaagactcaaactctggttcccaaacagagagcagtaaatttcct
tttgggatccatcaagccaaaagccaccggaatattaaactgctagaggacgaaccaagg
agccgggatgaaactcctctatgcaccataacccactggcaagactccttggccaaacgc
tgcatctgtgtgtcaaatatcgtccgtagcttgtcttttgtgcctggcaatgacaccgaa
atgtccaaacatccaggcttggtgctgatcctgggaaagttgatccttcttcaccatgag
catccagaaagaaagcgagcgccacagacatatgagaaagaggaagaggaggacaaaggg
gtggcctgcagcaaggatgaatggtggtgggactgcctcgaggtcttgagggataataca
ttggtcacattagccaacatttctgggcagctagacttgtctgcttacacagaaagcatc
tgtttgccaattttggatggcttgctgcactggatggtgtgcccatctgcagaggcacag
gatccttttccaaccgtggggcccaactcggttctttcgcctcagagacttgtgctggag
accctgtgtaagctcagtatccaggacaataatgtggaccttatcttggccaccccccca
ttcagtcgtcaggagaaactctacgctactttagttaggtacgttggggaccgcaaaaac
ccggtctgccgagaaatgtccatggcgctcttatcgaaccttgcccagggggacacatta
gcagcaagggcaatagctgtgcagaagggaagcatcggaaacttgataagcttcctggag
gatggggtcactatggcccagtaccagcagagccagcataacctcatgcacatgcagcct
ccacctctggagccacctagcgtagacatgatgtgcagggcagccaaggccttgctggcc
atggctagagtggacgagaaccgctcagagttccttttgcacgagggtcgtttgctggat
atctcaatatctgctgtcctgaactctctggttgcatctgtcatctgtgatgtacttttt
cagattgggcagttatga
DBGET
integrated database retrieval system
