Struthio camelus australis (South African ostrich): 104152091
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Entry
104152091 CDS
T08512
Symbol
NUP54
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104152091 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104152091 (NUP54)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104152091 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
104152091
NCBI-ProteinID:
XP_009685555
Ensembl:
ENSSCUG00000018692
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MPVLSPVMENILAFTSXEPAFYFKLMLPCSFSASHLSGFGGLETANSTASGFNFGGFGLT
ANPAVNFNIGNFGVSTTSTPPFHFGNSLASAGAFGGFGTTTTTAGSAFSFSAPTNTGTSG
LFGASQNKGFGFGTSFGTGTGTGLGTGLGTGLGFGGFGTQQQQTTLGSSLFSQPAQTPAQ
SNQLINTASALSAPTLLGDERDALLAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRF
KAVGYSLMPNNKDEDGLVVLVFNRKEIDIRSQQQQLVESLHKILGGNQTLTVNVEGVRTM
PDDQTEVIIYVVERSPNGTSRRVPATTLYAHFEQANIKTSLQQLGVTLSMARTELSPAQV
KQLLQNPPAGVDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDI
ISEDISELQKNQTTTMAKIAQYKRKLMKLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQ
LDTIQCELNAPTQFKGRLNELMSQIRMQNHFGAVRAEERYYVDADLLREIKQHLKQQQEG
LSHLISIIKDDLEDIKLIEHGLNESIPIRGGVFS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttttgtctcctgtgatggaaaatattttagcttttacttccnntgaacctgct
ttttacttcaaactaatgttgccttgctctttttctgcttcccacttgtcaggatttggt
gggcttgaaactgcaaactccactgccagtgggtttaattttgggggtttcggattaact
gctaatcctgcagtgaattttaatattgggaatttcggtgtttccactacctcaactcca
ccattccattttggtaacagtctggcaagtgcaggtgcgtttggaggatttgggacaact
accaccactgcggggtcagcgtttagtttttctgctcccaccaatacaggcaccagtgga
ctctttggtgcttcccagaacaaaggctttgggtttggtactagttttggcacaggaact
ggaactggcttgggtactgggttgggaaccgggttaggctttggaggcttcggtacgcag
cagcagcaaactacactggggagcagcttgttcagccagccggcgcaaacacctgcccag
tctaaccagctcatcaacacagccagcgccctctcggctccaacgcttttgggggatgag
agagatgctcttttggcaaaatggaaccagctgcaggccttctggggaacaggcaaagga
tacttcaacaacaacattgctccagtggagttcacgcaggaaaacccattttgcagattt
aaggctgtgggttacagtttaatgccgaacaacaaggatgaagatggcctcgtggttttg
gtctttaatagaaaagaaatagacattcgaagccagcagcagcagctagtggaatcgcta
cacaaaattctgggaggaaaccagaccctcactgtcaacgtagaaggtgttagaacaatg
ccagatgaccagactgaagtcatcatttatgttgtcgagcgctcgcccaatggcacttct
aggagagttccagcaacgaccctctacgcacactttgagcaagccaacataaagacgtcc
ctgcagcagctgggggtcaccctgtccatggccagaacagagctttccccggcacaagtc
aaacagctcctgcagaaccctcctgctggtgttgatcctattatctgggaacaagccaaa
gttgataatcctgatcctgacaagcttattcctgtgccaatggtgggtttcaaggaactg
ctgagaagactgaaggtccaagatcagatgaccaaacagcatcaaacccgattagatata
atatcagaagatatcagcgagctgcaaaaaaaccagacaacaacgatggcaaaaattgca
cagtacaaaaggaaactgatgaagctttctcataggactctacaggtcttaataaagcag
gaaatccaaaggaaaagtggctatgccattcaagcagacgaagaacagcttcgtgtacag
ttagatacaattcaatgtgaactaaatgcacctacgcagttcaagggcagactgaatgag
ctcatgtcccaaatcaggatgcagaaccactttggtgcagtgagggctgaagagcgctat
tacgtagatgcagatctcttaagggaaatcaagcaacatctgaagcagcagcaagaaggc
ctgagtcacttgataagcattataaaggatgacttggaggacataaagctaatagaacat
gggctgaatgagagcatccccatcagaggaggtgtcttcagttga
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