Struthio camelus australis (South African ostrich): 104152161
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Entry
104152161 CDS
T08512
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03082
ATP-dependent chromatin remodeling
scam03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104152161 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104152161 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scam01009
]
104152161 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scam03021
]
104152161 (SMARCB1)
03036 Chromosome and associated proteins [BR:
scam03036
]
104152161 (SMARCB1)
Protein phosphatases and associated proteins [BR:
scam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104152161 (SMARCB1)
Transcription machinery [BR:
scam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104152161 (SMARCB1)
SWI/SNF complex
104152161 (SMARCB1)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104152161 (SMARCB1)
PBAF complex
104152161 (SMARCB1)
SWI/SNF complex
104152161 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
104152161
NCBI-ProteinID:
XP_009685671
Ensembl:
ENSSCUG00000018859
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MFRGSLYKRYPSLWRRLATVEERKKIVASSHENQRSHSPRRYHGYTTLATSVTLLKASEV
EEILDGNDEKYKAVSISTEPPTYLREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRM
GRDKKRTFPLCFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPE
MFSEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLV
DQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTV
EIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaggttccctgtacaagagatatccctcactgtggaggcgactagccacagtg
gaagagaggaagaagatagtggcatcttcacacgaaaatcaacgatctcacagtcccaga
agatatcatggctatacaacattagccactagtgtgacgctgttaaaagcctctgaagtg
gaagagatcttggatggaaatgatgagaagtataaggcagtgtctatcagcacagaacct
cccacctacctcagggaacagaaggcaaagaggaacaaccagtgggtgccgaccctgccc
aacagctctcatcacctggacgcggtgccatgctcaacaactattaacaggaatcgcatg
ggcagggataagaagaggacctttcctctctgctttgatgaccatgacccagcagtgatc
cacgagaatgcatcccagccggaggttctggttccaatcaggcttgatatggaaattgat
gggcagaaactcagagatgcgtttacgtggaacatgaatgaaaagctaatgaccccagaa
atgttctctgagattctttgtgatgacctcgatttgaatcctctgacttttgtccccgct
attgcctctgccatccgacaacagatagagtcgtacccgactgacagtatcctggaagac
cagtcagatcaacgagttattattaagctaaacatccacgtagggaacatctcccttgta
gaccagtttgaatgggacatgtcagagaaggagaattcaccagagaagtttgccttgaag
ctgtgctcagagcttggcctgggtggagagtttgtcaccactatcgcctacagcatccgg
ggacagctgagttggcatcagaagacgtacgccttcagcgagaaccctttgccaactgtg
gaaattgccattcgcaacacaggggatgctgaccagtggtgccctcttctggaaaccctc
acagatgctgagatggagaagaagatcagagaccaggacagaaatacaaggcgcatgaga
cgtttggccaatactgctccagcctggtaa
DBGET
integrated database retrieval system
