Struthio camelus australis (South African ostrich): 104152276
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Entry
104152276 CDS
T08512
Symbol
ABCA1
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam02010
ABC transporters
scam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104152276 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104152276 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scam02000
]
104152276 (ABCA1)
Transporters [BR:
scam02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104152276 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
104152276
NCBI-ProteinID:
XP_009685848
Ensembl:
ENSSCUG00000019033
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTLQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGVVGNFNASIVSRLFSDAKRLLLYSQQDT
SIKDVQKVLGKLQKLGKIGSDLKLRDFLVDNETFSDFLHHNASMPPFAVDELLNAGVNLQ
KVIVSGYRMRLRNLCNASTLSEFLTIQNQTAAMDFEAFICTLPKEKLRTAEQAFHANLNP
LKPFQRRFSLNSSLWDLSETMETLIQSFGKLVKELQTMKSWSDMRQEVMFLTNVNASSSS
VQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEEDVINFYDNSTTPYCNE
LMKNLESSPLSRIIWRALKPLLIGKVLYTPDTPAIRKVMSEVNRTFQELGVFRDLGGMWE
EISPKIWTFMESSQEMDLIRTLLKGKDLWDLRLPASNWTVEDIARFLSKHPEEFEMANGS
AYTWVDAFNETDRAIQTISRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGIVFTE
VAPNSIELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVL
EQAIIRVQTGTEKTTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVFV
FLSIFAVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYISFSLKIFAS
LLSPVAFGFGCEYFALFEEQGVGVQWDNFFKNPLEEDGFSITTSAVMMLFDTFLYGVMTW
YIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHPHPDQKGPSEVCKEEEPMHLSLGVS
IQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFIL
GKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLQEKKVKEEMEQMAMDVG
LPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQG
RTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSS
CRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTVDVSAISNLITKHVSEARLVEDIG
HELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAET
SDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQMK
GWKLTQQQFVALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQ
PWMYDEQYTFISNDAPDDAGTQKLLDALLSKPGFGTRCMQGHAIPDTPCTVGQKEWTMAS
VPESVLDIFLKGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQNL
TGRNISDYIYFVFCLLSXKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQVKKILE
LAQGGSGDRFLNSLASFMKGLDTKSNVKVWFNNKGWHAIASFLNVINNAILRANLQQGKN
PSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSK
AKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLALLLL
LYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNINDIL
KSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVF
FLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVNRERQRIISGGGQSDILEIKELTKVTAK
VLYLSPRKVDRICIGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGDAFLKGNSILSN
IQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEK
YAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFFG
LAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacacagctgggactgctgctgtggaaaaacttcacctacagaagaaga
cagactttgcagctgctgattgaagtcgcttggcctctttttatattcttcatcctgatc
tctgtaagactttcatatccgccctatgaacagcatgaatgtcacttcccaaacaaagcc
atgccttcagcgggcacgttgccttggatacaggggatcatctgcaatgccaacaacccc
tgcttccgctacccgactcctggggagtcccctggtgtcgttggaaacttcaatgcctcc
attgtttcccgcctgttctcggatgccaagaggttactcttgtacagccaacaggacacg
agcataaaggatgtccagaaggtcctgggcaaactgcagaagttggggaagattggctca
gacttgaaactccgggatttcctggtggacaatgagacgttctcagacttccttcatcat
aatgcgtccatgccaccgtttgcagtagatgagctgctgaacgctggggtcaacctccag
aaggtcattgtgtctggctaccgaatgcgactgcgaaatctctgcaatgcctcaacattg
tctgaatttcttacaattcaaaaccagacagcggccatggactttgaagccttcatttgc
acattaccaaaggaaaaactccgcacagcagagcaagccttccatgctaacctgaaccct
ttgaaaccttttcagagacggttctctctcaattcctccttgtgggatctgtcagaaacc
atggagactctgatacagagctttgggaagcttgttaaagagttgcagaccatgaagagc
tggagtgatatgaggcaagaggtgatgttcctgaccaatgtgaacgcctccagctcctct
gtgcagatttaccaggctgtttcacgcattgtatgtggccatcctgaaggtggagggctc
aaaatcaaatccctcaactggtatgaggacaacaattacaaggcacttttcggagggaac
agcactgaagaagatgtaattaatttctacgataactccacaacaccctactgcaatgag
ctgatgaagaacctggaatccagcccgctctcccgaatcatttggagggctttgaaacct
ttgctgattgggaaggtcttgtacactccggacacaccagctatacggaaggtcatgtct
gaggtgaacaggacgttccaggagctgggtgtgtttcgtgacctcggggggatgtgggag
gagataagcccgaagatttggacgttcatggaaagtagccaggaaatggatctgattcgg
acactgctgaaaggcaaagatctctgggacctacggttgcctgcttcaaactggactgtg
gaagacattgcccgcttcctgtcaaagcacccagaggagtttgagatggcaaatggctca
gcatacacctgggtggatgccttcaatgagacagaccgggctattcagaccatctctcgc
ttcatggagtgtgtcaacctggacaaactggagcctgtggcaacagaagtcaggcttata
aataagtccttggagctgctggatgaaaggaggttctgggctggcatcgtcttcactgaa
gtagctcctaacagcatagagctccctcatcatgtcaaatacaagatacgcatggacatt
gacaatgtggaaaggaccaacaagatcaaggatgggtactgggatcccggtccccgggct
gacccctttgaggacatgcgctatgtctggggaggctttgcctacctgcaggatgtgttg
gaacaggccatcatcagagtgcagacaggcacagagaagacgacaggggtttacgtgcag
cagatgccctatccgtgttacgtggatgacatatttctgcgcgtcatgagccgctccatg
cccctcttcatgactctggcctggatctactcggtggctgtgattatcaagggtatcgtg
tacgagaaggaagcccgactgaaggagacaatgaggatcatgggcctagacaatggcatc
ctgtggctaagctggttcattagcagccttatccctctcctgatgagtgccggcctgctg
gttctgatcctcaagatggggaatctgctgccttacagtgacccgagcgtggtgttcgtt
ttcctctccatctttgccgttgtgaccatactccagtgcttcctcatcagcacggtgttc
tccagggccaacctggcagctgcctgtgggggcattgtctacttcacgctgtacctgccc
tacgtgctgtgtgttgcctggcaggactacatcagcttctccctcaagatctttgcgagc
ctgctgtctccagtagcctttggcttcggttgtgagtactttgcactgtttgaggaacag
ggagttggtgttcagtgggacaacttcttcaagaacccattggaagaagatggctttagc
atcaccacatctgctgtcatgatgttgtttgataccttcctatatggcgtcatgacttgg
tacattgagtctgtcttcccaggtcagtatgggattcccagaccctggtactttcctttc
acaaagtcctattggtttggcgaggaaccgcaggataggcaacatcctcatcctgaccag
aagggcccttcagaagtgtgcaaggaggaagagcccatgcatctgagccttggggtttcc
atccagaatctggtcaaggtttatcgtgatggcaagaaagtcgctgtagatggtctcacg
ctgaacttctatgaagggcaaatcacttcctttctgggacataatggagcggggaaaacc
actactatgtccatcttgactggcttgtttcctccaacctcgggtacagccttcatcctg
ggcaaagatatccgctctgagctcagcaccatcaggcagaatctgggtgtctgtccacaa
cacaacgtgctttttgacttgctgaccgtggaagagcacatctggttctatgctcgtctc
aaagggctgcaggaaaagaaggtgaaagaggaaatggagcagatggcaatggatgttggt
ttacctcacaaactcaaagctagaactagcaaactctctggtggcatgcagaggaagctc
tcggtcgccttagcctttgttggtggctccaaggttgtcattctggatgaacccacagct
ggagtggacccttattctcgcagagggatatgggaattgctgctcaagtatcggcaagga
cgaacaatcattctctccacacaccacatggatgaagcagacattttgggggaccgaatc
gccatcatttctcatggcaagctgtgctgtgttggctcttccctattcctgaagaaccag
ctgggaacaggctattatttgaccctagtcaagaaggacgtggattcttctctgagctcc
tgccgaaacagcagcagcactgtgtcttatttgaaaaaggatgatagcgtctcccagagc
agctctgatgctggccttggcagtgaccatgaaagtgacaccttgacagtagacgtttct
gcaatctcaaatctgattacaaagcatgtttctgaggccagactggtggaggacattggg
catgagttaacctatgtcttgccatacaaagctgctaaagagggagcttttgtggagctg
ttccatgaaattgatgaccgcctctcagatcttggcatttccagctatggcatttctgaa
accaccctggaggagatctttctcaaagtggctgatgatagtggggtggatgcagaaacc
tcagatgggaccctgccagccagaaggaacagacgcgtatttggagacagacagagctgc
cttcgtccgtttacagaggatgatgcatttgaccctaatgattcagacatagatccagca
gagtccagggagactgaccttctcagcgggatggacgggaagggctcctaccagatgaag
ggctggaagctcacccagcagcagttcgtggctctcctttggaagaggctgctcattgcc
aagcgaagccggaagggcttcttcgctcagattgtgctgccagctgtgtttgtgtgtatc
gctctcatgttcagcctgattgttcctccctttgggaagtatcccagcttggaattacag
ccctggatgtatgatgagcagtacacttttatcagcaatgatgctccagatgatgcaggc
actcagaagcttttggatgcacttctcagtaagcctggctttgggacgcgctgtatgcag
ggacatgccatcccagacactccttgcactgttgggcagaaggaatggaccatggcttca
gtcccagaatccgtcctggacatcttcctgaaaggcaactggagcatggagaacccttcc
ccgtcgtgcgaatgcagcaatgagaagatcaagaagatgttgccagtgtgtccccctggt
gcaggcgggctgcctcccccacagcgagagcaagacacagctgacatcctccagaatctg
acaggccgtaatatatcggactacatctactttgttttctgtctcctcagctgaaagaat
aagatctgggtgaatgagttcaggtatggtggcttttccctgggagccagcagttccctc
atgcttcctccaagccacgaagtcactgatgccattaaacaagtgaagaaaatcttggag
ctagcacagggaggttctggagatcggtttctcaatagcttggcaagtttcatgaaaggc
ctggatacaaagagcaatgtaaaggtgtggttcaacaacaaaggctggcatgccatcgcc
tccttcttgaatgtgataaacaatgccatccttcgggccaacctgcagcagggcaagaac
cccagtgcttatgggatcactgccttcaaccaccccctcaaccttaccaagcagcagctc
tctgaagtggccctgatgaccacgtccgtggatgtcctcgtctccatctgtgtgatcttt
gccatgtcctttgttcctgccagctttgtggtcttcctcatccaggagcgggtcagcaag
gccaaacacttgcagttcatcagtggtgtgaagccagtgatctactggttggccaacttt
gtctgggatatgtgcaactacattgttccagcgacgctagttatcatcatcttcatctgc
ttccagcagaagtcctatgtgtcctcctccaacctgcctgtgctggccctccttttgctt
ctctatgggtggtctatcactcctctcatgtacccagcctccttcgtgttcaaaatcccc
agcacagcatatgttgtgctgaccagtgtgaacctcttcattggcatcaacggtagtgtg
gccacctttgtcctggagctcttcaccaataacaagctgaacaacatcaatgacattctg
aagtcagtcttcctcatcttcccccacttctgtctgggacggggactcattgacatggtg
aaaaaccaggctatggctgatgctctggagaggtttggagagaatcgtttcgtgtcccct
ctgtcatgggacctagtggggaggaacctcttcgccatggcagtggagggtgtagtcttc
ttcctcatcaccgtgctcatccagtacaggttcttcatcaaacccaggcctgtctatgcc
aagctgcctcctgtgaatgatgaagatgaagatgtaaacagagagagacagaggataatt
agcggaggaggacagagtgacatcttggaaatcaaggagctgaccaaggtgactgcaaaa
gttctgtatttgtctccaaggaaagttgataggatctgcattggaatcccccctggagaa
tgctttgggctcctgggagtaaatggtgctggcaagtcatccactttcaagatgctaact
ggtgatacagatgtgacaggaggagacgcttttctcaaaggaaacagtatcttgtccaac
atccaagaagtccaccagaacatgggctactgcccgcagtttgacgccgttaatgaactg
ctgacggggcgagaacatctggagttcttcgcgctcttgagaggggttccggagaaagaa
gtctgcaaggttggtgaatgggcaattcggaaactgggccttgtgaaatatggagaaaaa
tatgcagggaactacagtgggggaaacagacgcaagctctccacagcgattgccctcatt
ggggggccacctgtggtattcctggatgagccgacaacaggcatggatcccaaagcacgc
cgtttcctatggaactgtgctctgagtgtcatcaaggaggggagatcagtggtgctcaca
tctcacagcatggaagaatgtgaagcactgtgcacacgaatggcgataatggtcaatggg
cggttcaggtgcctgggcagtgtccagcacctaaagaacagatttggagatggttacacc
atagtggtgcgaattgcaggggcaaacccggacctgaagccggtggaggaattctttggg
cttgcctttcctggaagtgtcctgaaggaaaagcatcggaatatgcttcagtaccagctt
ccttcttcaccatcttccctggccagaatatttagcatcctctcccagaacaaaaagaga
ctccacatagaagactactccgtttctcagaccacacttgaccaagtatttgtaaatttt
gctaaggaccaaagcgacgacgaccacactaaggacctgtcattgcacaaaaaccagact
gtggtagatattgcaatccttaattcctttctgcaagatgagaaggtgaaagaaagttgt
gtgtga
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integrated database retrieval system
