Struthio camelus australis (South African ostrich): 104152526
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Entry
104152526 CDS
T08512
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104152526 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104152526 (CNOT10)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104152526 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
ARM_TT21_N
TPR_8
ANAPC3
ARM_TT21
TPR_16
DUF6058
TPR_17
TPR_7
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
104152526
NCBI-ProteinID:
XP_009686198
Ensembl:
ENSSCUG00000014480
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MQEALLAARFLPSDQGTEKHEGAGTSSGITDQEKELSSSALQAFLAGNYDACLQHLNTLQ
DINKDDYKITLNTAVAEFCKSNQTTTDNLKQTLNQLKNQVHSAVEEMDGLDDVENSMLYY
NQAVILYHLRQYAEAISVGEKLYQFIEPFEEKFAQAVCFLLIDLYLLTYQAEKALHLLAV
LEKMISQGNNNSKNGKNESANNTNKDSSNQKAESGALIEVAKSKIHQYKVRAYIQMKSLK
ACKREIKSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRC
MFWNNLGCIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSSDPGKKFSGRPMCTLLTNK
RYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKG
LPSKKGIVQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLP
EDQQEPKQENGSKTSNQLGGNAENSESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRC
SILACSAYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITH
LNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAY
CLRSEYDKARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVK
TLSDMRKKPVFQPVHSIQPIQMPAFTTVQRK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagccctcctggctgcgaggttccttccctcagatcaaggtactgagaaacat
gaaggagcaggtacttcttctgggattactgatcaggaaaaggaattgtcaagcagtgca
ttacaagcctttctggctgggaattacgatgcttgtttacagcacctaaatacccttcaa
gacataaacaaagatgactacaaaataaccttgaacactgctgttgcagagttctgtaaa
agtaatcagactacaacagacaatttgaaacaaactcttaaccagctgaagaatcaggtt
cactctgctgttgaagaaatggatggtttagatgacgttgaaaacagtatgctttactac
aatcaagctgttattttgtatcatctgcgtcagtatgctgaagctatatcagttggagag
aagctgtatcaatttatagaaccttttgaagagaagtttgcccaggctgtgtgcttcttg
cttatagacttgtacctgctaacttaccaagctgagaaagccttgcatctccttgctgtt
ttagaaaaaatgatttcacagggcaacaataacagcaagaatggaaaaaatgagtcagct
aataatacaaataaagattcctctaaccagaaggctgaaagtggagctttaatagaagtt
gccaagtctaagatacatcagtataaggtgagagcctatatccagatgaagtcactaaaa
gcatgcaaaagggagatcaagtctgttatgaatacagctgggaattcagctccttctctc
tttctaaagagcaattttgaatatttgagagggaattatcggaaagcggtcaaacttttg
aacagtgcaaatattgctgaacatccaggcttcatgaaaacaggtgaatgcttaaggtgc
atgttttggaacaatcttggttgcatccactttgctatgggaaagcacaacttaggaatt
ttttacttcaaaaaagccttgcaagaaaatgataatgcgtgtgcacaactaggaacaggt
agttcagatccaggtaaaaaattttcaggaagacctatgtgtacactactgactaacaaa
cggtatgagttgctctacaattgtggaatacagcttttacatattgggaggcccttagct
gcctttgaatgcttgatagaggcagttcaggtttatcactcaaaccctcgtctttggctg
agaatagcagaatgctgcattgctgccaataaagggacatcagaacaagaaactaaaggc
cttcccagcaaaaagggaattgtgcaatctatagtaggtcaaggctaccaccgtaagata
gtcctagcatcccagtcaatacagaatgtcgtttataatgatggtcagtcctcagcaatc
cctgtagccagtatggaatttgcagcgatctgtctaagaaatgctttgttgttactgcca
gaagatcagcaggagccaaagcaggaaaatgggtcaaaaactagtaaccagctaggggga
aatgcagaaaacagtgaaagcagtgaagcgtgcagcaataaaagtcatgaaggggataaa
ttcattgcagctccaccttcttcacctttgaagaaacaggaattagaaaacttaaggtgc
tcaatacttgcctgtagtgcttacgttgctctggctttgggtgataaccttatggcattg
aatcatgcggataagcttcttcagcagccaaagttgtcagggtcccttaagtttcttggg
catttgtatgcagcagaagctctcatctctctagacagaatatctgatgccatcactcac
ttgaaccccgagaacgtcactgatgtttccctggggatctcttcaaacgagcaggatcaa
gggtctgacaaaggcgaaaatgaagcgatggaatcttctggcaagcagaccccccagtgt
tatcccagttcagtcacatctgcacgaacgatgatgttgtttaaccttggaagtgcttac
tgcctgaggagtgaatatgacaaagcccgaaagtgtctccatcaggctgcttcactgatc
catcccaaagagatccctccagaggctattctactggctgtgtatcttgaattacagaat
ggtaacactcagctggcattgcagatcatcaagagaaaccagcttctcccttctgtgaaa
acactctctgacatgcggaagaagcctgtttttcagccggtccactcaatccagcccatt
cagatgccagctttcactactgttcaaaggaagtga
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