KEGG   Struthio camelus australis (South African ostrich): 104152996
Entry
104152996         CDS       T08512                                 
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
scam  Struthio camelus australis (South African ostrich)
Pathway
scam03022  Basal transcription factors
scam03420  Nucleotide excision repair
scam04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:scam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104152996 (CDK7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104152996 (CDK7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104152996 (CDK7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:scam01001]
    104152996 (CDK7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scam03021]
    104152996 (CDK7)
   03019 Messenger RNA biogenesis [BR:scam03019]
    104152996 (CDK7)
   03400 DNA repair and recombination proteins [BR:scam03400]
    104152996 (CDK7)
Enzymes [BR:scam01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     104152996 (CDK7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     104152996 (CDK7)
Protein kinases [BR:scam01001]
 Serine/threonine kinases: CMGC group
  CDK family
   104152996 (CDK7)
Transcription machinery [BR:scam03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     104152996 (CDK7)
Messenger RNA biogenesis [BR:scam03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     104152996 (CDK7)
DNA repair and recombination proteins [BR:scam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     104152996 (CDK7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Kinase-like Seadorna_VP7 RIO1 Haspin_kinase APH Pkinase_fungal
Other DBs
NCBI-GeneID: 104152996
NCBI-ProteinID: XP_009686914
Ensembl: ENSSCUG00000012940
LinkDB
Position
Unknown
AA seq 335 aa
MQLLPGSGIQWAFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS
HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSIVLTQSHIKAYMLMTLQGLEYLHQ
HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRAPELLFGARMY
GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPGMTSLPDYVTFK
SFPGMLLQHIFSAAGDDLLDLLQGLFTFNPCARVTATQALKQKYFSNRPGPTPGSQLPRP
NCPAEALKEQQNALLNLKRKRTEGIDQGLPKKLIF
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgcaacttctgcctggtagtggaatccagtgggcatttgctactgtctataaagcaagg
gataagaacaccaaccaaattgtggctattaaaaagattaaacttggacatagatcagaa
gctaaagatggaatcaacagaacagccctcagagagataaagttgttacaggagctaagc
catccaaatattattggtcttctagatgcatttggacacaaatcgaatattagtttggtg
tttgattttatggaaacagatctagaggttattataaaggatactagtattgtgttgaca
cagtctcacatcaaagcatatatgctgatgacgcttcaaggactagaatatttacatcag
cactggattctacacagggatctaaaacccaataatttgttgttggatgaaaatggggtt
ttaaaattggctgactttggcttggcaaaatcttttggaagtccaaatagagtctatacg
caccaagtagtaacaaggtggtaccgagccccagagctattgtttggtgctagaatgtat
ggtgtaggtgttgatatgtgggctgttggttgtattttagctgaattactcctccgggtt
ccttttttgccaggagactctgatcttgatcagctgacaaggatatttgaaacactgggc
actccaacagaagaacagtggcctggaatgactagtcttccggattatgtcacgtttaag
tccttccctggaatgctgcttcaacatatcttcagtgcagctggtgatgatttgcttgat
cttctgcaaggcttattcacatttaatccttgtgctagggttacagctactcaggcattg
aaacagaagtattttagtaaccgaccaggaccaactcccggaagtcagcttccaagaccc
aactgtcctgcagaagctctaaaggagcaacaaaatgcacttttaaatttaaaaaggaaa
agaacagaaggaatagatcaaggattacccaaaaaattgattttttga

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