Struthio camelus australis (South African ostrich): 104153034
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Entry
104153034 CDS
T08512
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104153034 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104153034 (BARD1)
04121 Ubiquitin system [BR:
scam04121
]
104153034 (BARD1)
03036 Chromosome and associated proteins [BR:
scam03036
]
104153034 (BARD1)
03400 DNA repair and recombination proteins [BR:
scam03400
]
104153034 (BARD1)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104153034 (BARD1)
Ubiquitin system [BR:
scam04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104153034 (BARD1)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104153034 (BARD1)
DNA repair and recombination proteins [BR:
scam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104153034 (BARD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_4
Ank_2
Ank_5
Ank_3
zf-RING_6
BRCT
BRCT_2
Ank_KRIT1
ANK_LRRK2
NIBRIN_BRCT_II
PTCB-BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
104153034
NCBI-ProteinID:
XP_009686985
Ensembl:
ENSSCUG00000013356
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MSLLFAHLRSCVGDCVGTECPVCHTPAWVQDVQINRQLDNMIQLCSKLRHLLGEDTSDSA
EDKSSPTDPGCSTKSKKEQIKMWFSPRSRKIRCILNKSQPVTKSNDVCQDPPSVYDFFPS
PPHEKPSKQAKKPTKKLSKKMKKKRLADINKVWGLEKLEEKGGVEEIPNKEKCVIICSQP
VVLCTPEPNSPEETLQQSGCSKNMEVSPQVRSSEKKAVGEVACPAQGSKEEVCAPEKPRS
IENEVTPLKRGREQSRFPVTSQSKRPRRSERNSIRNSCPQEACLEEFPQGNPISPAAENK
SPVRISSSVSKLASDTLMKTRSPAVSREITSPSLSKAPSTPLTSKTCNQTGIPCSPSVLK
SPGNKTIARRNYKGETLLHVASMKGDLTAVEQLLKNGADPNVKDNAGWTPLHEACNHGHK
EVVELLLQHRALVNTTGYQNDSPLHDAARNGHVDIVELLLLHGASRDAVNISGLRPVDYA
ESEKMKSVLTLPVRNASLSFSQPSEPMSPSQPREGPLGILGSNLNSAQQKLLNKLATILK
ARSCTEFNSTVTHLVIPDAPIPSTVKCMMAVLTGCWVLKFEWVQACLQTTVREQEEKYEI
QGGPQRGRLNREQLLPKLFDGCYFYFLGSFNRHQKSDLVELVKAAGGQILVRQPKPDSDV
TQTINTVAYHAEPTSDQRFCTQYVIYDVSSKFKPEKIRQGKVWMAPSSWLIDCMMSFQLL
PIK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctatttgctcacctaagatcttgtgtgggcgactgcgttggcacagaatgc
ccggtgtgccacacgccagcctgggtgcaagatgtgcagataaaccggcagctagataac
atgatccagctttgcagcaaactgcggcatctactgggtgaggacacctcagattcggca
gaagataaatcttcaccaacagacccaggttgtagcacaaagagtaagaaggaacagata
aagatgtggttcagcccaagaagtaggaagattagatgcatcctgaacaagagccagcca
gtaactaaaagcaatgatgtttgtcaagacccaccttcagtttatgatttctttccttcc
cctcctcatgaaaagccttccaagcaggccaaaaagccaacaaagaagctgagtaagaag
atgaagaaaaaacgtctagcagacatcaacaaagtgtggggcttagagaagcttgaggag
aaaggaggagttgaggagatccccaataaggagaagtgtgtgattatttgcagtcagcca
gtagtcctctgcaccccagaaccaaatagccctgaggagacacttcagcagtcaggctgc
agcaagaatatggaagtatccccacaggtaagatcctccgagaagaaagctgttggggag
gttgcatgtcctgcacaaggcagcaaggaagaagtttgtgctccagagaaaccacggtca
atagaaaatgaagttacacctttaaaacgtggacgggagcaatccagatttccagttact
tctcaatctaaaagaccaagaagatcagagaggaacagtattaggaattcgtgccctcaa
gaggcttgcttagaggagttccctcagggcaatcccatctccccagcagctgaaaacaaa
agtccggttcgtatttcttcctctgtgtcaaaactcgctagcgacaccttaatgaagacc
agaagccctgcagtctctcgagaaataactagtccttcgctttcaaaagctccctctact
ccacttacttctaagacttgtaatcaaacaggaataccatgcagtccttctgtgttgaag
tcccctggtaataaaacgattgccagaagaaattacaaaggagagactctgctccatgtt
gcttccatgaagggcgacttaacagctgttgaacagctactgaaaaatggggctgatcct
aatgttaaagacaatgctggctggacaccactgcacgaggcatgtaatcacgggcacaaa
gaggtggtggagctgttgctacagcacagagcgctagtgaatactactgggtatcagaac
gactctccgcttcatgatgctgccagaaatgggcacgtggacatcgttgagctgctgctt
ttgcatggtgcatctcgtgatgcagttaatatatctggtttgcggcctgtggactatgca
gaaagtgaaaagatgaagtctgtgctaacgttgccagtgaggaacgcatcactttcgttt
agccagccctctgagccaatgagccctagccagccaagggaagggcctcttggtatactc
gggagcaatcttaattcagcgcaacagaaattgctgaacaaactagcaacaattttgaaa
gctcgaagctgtactgaatttaacagcacagtaactcaccttgttatccctgatgctcca
attccaagtactgtcaaatgcatgatggctgttctgactggatgttgggtcctcaagttt
gaatgggtacaagcctgtctgcaaaccacagttcgagaacaagaagagaagtatgaaatc
caaggtggcccacaaagaggccggctcaacagggaacagctgctgccaaagttgtttgat
ggatgctacttctattttttgggatctttcaaccgccaccagaagagtgatctcgtggag
ctggtcaaagcagcaggaggacaaattctggttcggcagccgaaacctgacagcgatgtg
acgcaaacaatcaacacagtggcataccatgcagaacctacttctgaccagagattttgc
acacagtatgtcatctatgatgtgtcttctaaattcaaaccagagaaaattcgtcagggt
aaggtctggatggccccctccagctggcttatagactgtatgatgtcatttcagctgctg
ccaataaagtga
DBGET
integrated database retrieval system
